Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02633 and RBAM_015960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:31
# Commandline: needle
# -asequence dna-align/BSNT_02633___gid.1.9828.seq
# -bsequence dna-align/RBAM_015960___gid.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02633___gid-RBAM_015960___gid.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02633___gid-RBAM_015960___gid.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02633___gid
# 2: RBAM_015960___gid
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1314
# Identity: 1080/1314 (82.2%)
# Similarity: 1080/1314 (82.2%)
# Gaps: 12/1314 ( 0.9%)
# Score: 4458.5
#
#
#=======================================
BSNT_02633___ 1 ATGAACCAACAAACAGTGAATGTAATCGGAGCCGGACTCGCAGGAAGTGA 50
||||||||.||||||||.||||||||||||||.||.||.||.||||||||
RBAM_015960__ 1 ATGAACCAGCAAACAGTTAATGTAATCGGAGCAGGCCTTGCCGGAAGTGA 50
BSNT_02633___ 51 AGCAGCATGGCAGCTTGCCAAACGGGGGATTCAAGTCAAATTGTATGAAA 100
|||.||||||||||||||.|||||.||.||||||||.|||.|.|||||||
RBAM_015960__ 51 AGCGGCATGGCAGCTTGCAAAACGAGGAATTCAAGTGAAACTATATGAAA 100
BSNT_02633___ 101 TGCGGCCAGTTAAACAAACGCCTGCGCACCATACAGATAAATTTGCCGAG 150
|||||||.||.|..||.|||.|.||.||.|||||.||||||||.|||||.
RBAM_015960__ 101 TGCGGCCCGTCAGGCAGACGGCAGCCCATCATACTGATAAATTCGCCGAA 150
BSNT_02633___ 151 CTTGTCTGCAGCAACTCTCTTCGCTCTAATACACTTGCTAACGCTGTCGG 200
||.||.|||||||||||.||.||.||.||||||||.||.||.||.||.||
RBAM_015960__ 151 CTGGTATGCAGCAACTCCCTCCGTTCAAATACACTCGCCAATGCGGTAGG 200
BSNT_02633___ 201 TGTATTAAAGGAAGAAATGCGTGCGCTTGATTCAGC---CATT--ATCGC 245
.||||||||.|||||||||||.||.|||||.||.|| |||| ||
RBAM_015960__ 201 CGTATTAAAAGAAGAAATGCGGGCCCTTGACTCGGCAATCATTCAAT--- 247
BSNT_02633___ 246 GGCGGCTGACGAATGTTCGGTGCCTGCCGGGGGCGCTCTTGCAGTAGACC 295
|.|||||..||||.|||||.||.||||||||.||.|||||.||.||||
RBAM_015960__ 248 --CTGCTGATAAATGCTCGGTTCCGGCCGGGGGAGCGCTTGCCGTTGACC 295
BSNT_02633___ 296 GTCATGAATTTGCCGC-AAGTGTGACAAATCGGGTGAAAAATCATCCAAA 344
|||||||||||| ||| |||.|||||..|||..||||||||.|||||.||
RBAM_015960__ 296 GTCATGAATTTG-CGCAAAGCGTGACGGATCTCGTGAAAAACCATCCGAA 344
BSNT_02633___ 345 CGTAACCGTTATTAATGAAGAAGTGACTGAAATTCCTGAAGGCCCCACTA 394
||||||.|||.|||.|||.|||||.||.||.|||||.||||||||.|||.
RBAM_015960__ 345 CGTAACGGTTCTTACTGAGGAAGTAACAGAGATTCCGGAAGGCCCGACTG 394
BSNT_02633___ 395 TCATCGCAACGGGTCCGTTAACATCAGAATCGCTGTCTGCCCAGCTGAAG 444
|.|||||.||.||.|||.|.||.|||||||||||.||....||||||||.
RBAM_015960__ 395 TTATCGCGACCGGACCGCTTACGTCAGAATCGCTTTCACAGCAGCTGAAA 444
BSNT_02633___ 445 GAGCTGACTGGAGAGGACTATTTATATTTTTATGACGCAGCGGCGCCGAT 494
|||||.||.|||||.||.|||.|.||||||||||||||.|||||||||||
RBAM_015960__ 445 GAGCTCACGGGAGAAGAGTATCTGTATTTTTATGACGCGGCGGCGCCGAT 494
BSNT_02633___ 495 TGTAGAAAAAGACAGCCTTGATATGGATAAAGTGTATCTGAAATCCCGTT 544
|||.||||||||||||||.||||||||.||||||||..|.||||||||||
RBAM_015960__ 495 TGTCGAAAAAGACAGCCTCGATATGGAGAAAGTGTACTTAAAATCCCGTT 544
BSNT_02633___ 545 ATGATAAAGGTGAAGCAGCATATTTGAACTGCCCGATGACAGAAGAAGAG 594
||||.||.||.|||||.||.||.||.|||||||||||||||||.||||||
RBAM_015960__ 545 ATGACAAGGGAGAAGCGGCGTACTTAAACTGCCCGATGACAGAGGAAGAG 594
BSNT_02633___ 595 TTTGACCGTTTTCATGAAGCATTAACATCAGCAGAAACAGTGCCGTTAAA 644
||.||||||||..||||||||||.||..|.||.||.||.||.||.|||||
RBAM_015960__ 595 TTCGACCGTTTCTATGAAGCATTGACGACGGCTGAGACGGTACCTTTAAA 644
BSNT_02633___ 645 AGAATTTGAAAAAGAGATTTTCTTTGAAGGCTGCATGCCGATTGAAGTCA 694
||||||.||.|||||.||.|||||||||||||||||||||||||||||||
RBAM_015960__ 645 AGAATTCGAGAAAGAAATCTTCTTTGAAGGCTGCATGCCGATTGAAGTCA 694
BSNT_02633___ 695 TGGCAAAACGGGGTAAGAAAACAATGCTTTTCGGTCCGATGAAACCGGTT 744
||||.|||.|.||.||||||||||||||.|||||.||||||||||||||.
RBAM_015960__ 695 TGGCGAAAAGAGGCAAGAAAACAATGCTGTTCGGACCGATGAAACCGGTC 744
BSNT_02633___ 745 GGTCTAGAGCATCCTGTTACAGGAAAACGCCCTTATGCCGTCGTTCAGCT 794
||.||.||..||||....|||||.||.|||||||||||.|||||||||||
RBAM_015960__ 745 GGACTGGAAGATCCGAAAACAGGCAAGCGCCCTTATGCAGTCGTTCAGCT 794
BSNT_02633___ 795 CAGACAGGATGATGCTGCGGGAACACTTTATAATATTGTAGGATTCCAGA 844
|||||||||||||||.||||||||.|||||||||||||||||.||.||||
RBAM_015960__ 795 CAGACAGGATGATGCGGCGGGAACGCTTTATAATATTGTAGGTTTTCAGA 844
BSNT_02633___ 845 CTCATTTAAAATGGGGAGACCAAAAGGAAGTTCTCAAGTTGATTCCAGGG 894
|.|||||||||||||||||||||||.|||||.||.||..||||.||.||.
RBAM_015960__ 845 CACATTTAAAATGGGGAGACCAAAAAGAAGTGCTTAAACTGATCCCCGGT 894
BSNT_02633___ 895 CTTGAAAATGTAGAAATCGTCAGATATGGCGTGATGCATAGAAACACATT 944
|||||||||||.||.|||||||||||.|||||.|||||.|||||||||||
RBAM_015960__ 895 CTTGAAAATGTTGATATCGTCAGATACGGCGTCATGCACAGAAACACATT 944
BSNT_02633___ 945 TATTAACTCTCCAAGCCTGTTAAAGCCGACTTATCAATTTAAAAACCGCA 994
|||.|||||.||.|||||.||.||.|||||.||||||||||||.|.||.|
RBAM_015960__ 945 TATCAACTCGCCGAGCCTTTTGAATCCGACATATCAATTTAAACAGCGGA 994
BSNT_02633___ 995 GTGATCTGTTCTTTGCAGGCCAAATGACGGGAGTAGAAGGATATGTGGAA 1044
..||||||||.||.||.|||||||||||.||.|||||.||.|||||.|||
RBAM_015960__ 995 ACGATCTGTTTTTCGCGGGCCAAATGACCGGCGTAGAGGGTTATGTTGAA 1044
BSNT_02633___ 1045 TCAGCTGCCTCAGGACTTGTAGCAGGCATTAATGCGGCGAAGCTTGTATT 1094
||.||.||.|||||.||||||||.||.||.|||||.||.||.|||||..|
RBAM_015960__ 1045 TCTGCCGCTTCAGGTCTTGTAGCGGGAATCAATGCCGCCAAACTTGTGCT 1094
BSNT_02633___ 1095 GGGAGAAGAGCTTGTGATCTTCCCTCAGGAAACAGCAATTGGCAGTATGG 1144
.||..|.||.|||||||..|||||.|||||.||.||.||.||.||.||||
RBAM_015960__ 1095 CGGTCAGGATCTTGTGACATTCCCGCAGGAGACGGCGATAGGAAGCATGG 1144
BSNT_02633___ 1145 CACATTATATTACAACAACAAACCAGAAGAACTTCCAGCCGATGAATGCA 1194
|.||.||.|||||.||.|||||||||||||||||||||||||||||||||
RBAM_015960__ 1145 CTCACTACATTACGACGACAAACCAGAAGAACTTCCAGCCGATGAATGCA 1194
BSNT_02633___ 1195 AACTTTGGGCTTTTGAAAGAATTGCCAGTTAAAATTAAAAATAAAAAAGA 1244
|||||.||.||.||.|||||||||||.||.|||||||||||.||||||||
RBAM_015960__ 1195 AACTTCGGCCTCTTAAAAGAATTGCCTGTAAAAATTAAAAACAAAAAAGA 1244
BSNT_02633___ 1245 ACGAAATGAACAATACGCGAACCGTGCGATTGAAACAATTCAAACAATTT 1294
||||||||||.|||||||.||.||.||.|||||.||.||||||||.||||
RBAM_015960__ 1245 ACGAAATGAAGAATACGCTAAACGCGCAATTGAGACTATTCAAACTATTT 1294
BSNT_02633___ 1295 CGAAAACAATATAG 1308
|||||||.||||||
RBAM_015960__ 1295 CGAAAACGATATAG 1308
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