Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02628 and RBAM_015920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:30
# Commandline: needle
# -asequence dna-align/BSNT_02628___sucC.1.9828.seq
# -bsequence dna-align/RBAM_015920___sucC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02628___sucC-RBAM_015920___sucC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02628___sucC-RBAM_015920___sucC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02628___sucC
# 2: RBAM_015920___sucC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1158
# Identity: 1021/1158 (88.2%)
# Similarity: 1021/1158 (88.2%)
# Gaps: 0/1158 ( 0.0%)
# Score: 4557.0
#
#
#=======================================
BSNT_02628___ 1 ATGAATATCCATGAGTACCAGGGAAAAGAAGTCCTCAGAAAATATGGGGT 50
||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_015920__ 1 ATGAATATCCATGAGTACCAGGGAAAAGAAGTCCTCAGAAAATACGGGGT 50
BSNT_02628___ 51 ATCTGTTCCTGAAGGTAAAGTGGCTTTTACAGCAGAAGAAGCAGTTGAGA 100
.|||||||||||||||||||||||||||||||||||.|||||||||||.|
RBAM_015920__ 51 GTCTGTTCCTGAAGGTAAAGTGGCTTTTACAGCAGAGGAAGCAGTTGAAA 100
BSNT_02628___ 101 GTGCAAAGAGCTTATCCAGCTCGGTTTATGTCGTAAAGGCTCAAATTCAT 150
..|||.|||||.|.||.|||||||||||||||||||||||.|||||.|||
RBAM_015920__ 101 AAGCAGAGAGCCTGTCAAGCTCGGTTTATGTCGTAAAGGCGCAAATCCAT 150
BSNT_02628___ 151 GCTGGCGGTCGAGGCAAAGCTGGTGGGGTAAAAATAGCAAAATCATTAGA 200
||||||||.||.||||||||||||||||||||.||.||||||.||..|||
RBAM_015920__ 151 GCTGGCGGCCGCGGCAAAGCTGGTGGGGTAAAGATTGCAAAAACAAAAGA 200
BSNT_02628___ 201 CGAAGTAAAAGCGTATGCCGAAGAACTATTAGGGAAGACCCTAGTTACAC 250
.|||||.||||.|||||||||||||||.|||||.|||||.||.||.||||
RBAM_015920__ 201 TGAAGTGAAAGAGTATGCCGAAGAACTGTTAGGCAAGACGCTCGTCACAC 250
BSNT_02628___ 251 ATCAGACGGGTCCGGACGGCCAAGTAATAAAACGCTTACTTATTGAAGAA 300
||||.||||||||||||||.||||||||||||||||||||||||||||||
RBAM_015920__ 251 ATCAAACGGGTCCGGACGGACAAGTAATAAAACGCTTACTTATTGAAGAA 300
BSNT_02628___ 301 GGCTGCGATATTAAAAAAGAATATTACATCGGTCTAGTGCTTGACCGCGC 350
|||||||||||||||||.|||||.||..||||.||.||.|||||||||||
RBAM_015920__ 301 GGCTGCGATATTAAAAAGGAATACTATGTCGGGCTTGTACTTGACCGCGC 350
BSNT_02628___ 351 CACTTCAAGAATCGTTTTGATGGCTTCTGAAGAAGGCGGAACGGAAATTG 400
.|||||||||||||||||.|||||.||||||||||||||||||||.||||
RBAM_015920__ 351 TACTTCAAGAATCGTTTTAATGGCGTCTGAAGAAGGCGGAACGGAGATTG 400
BSNT_02628___ 401 AAGAAGTTGCGGAGAAAACACCGGAAAAAATCAAAAAAGCTGTCATTGAT 450
|||||||.|||||.||||||||.||||||||.||||||||.||.||||||
RBAM_015920__ 401 AAGAAGTAGCGGAAAAAACACCTGAAAAAATTAAAAAAGCGGTAATTGAT 450
BSNT_02628___ 451 CCAGCTGTTGGCCTTCAAGGCTATCAAGCCAGAGAAATTGCATTCGCTAT 500
||.|||||.||||||||.||||||||.||.||.||||||||||||||.||
RBAM_015920__ 451 CCGGCTGTCGGCCTTCAGGGCTATCAGGCAAGGGAAATTGCATTCGCAAT 500
BSNT_02628___ 501 TAATATTCCAAAAGAGCTCGTGGGAAAAGCTGCTAAATTTATGCTTGGAC 550
|||.||.||.||||||||.||.||.|||||.||||||||||||||.||..
RBAM_015920__ 501 TAACATCCCGAAAGAGCTTGTCGGCAAAGCCGCTAAATTTATGCTCGGTT 550
BSNT_02628___ 551 TATATAAAGCGTTTGTTGAGAAAGACTGCTCAATCGCCGAAATCAATCCG 600
||||.|||||.|||||||||||.||||||||.||||||||.|||||.||.
RBAM_015920__ 551 TATACAAAGCATTTGTTGAGAAGGACTGCTCCATCGCCGAGATCAACCCT 600
BSNT_02628___ 601 CTTGTTGTTACCGGCGACGGAAATGTGATGGCGCTTGATGCAAAATTGAA 650
||.||.|||||.||.||||||||.||.||||||||.|||||.||..||||
RBAM_015920__ 601 CTCGTCGTTACGGGGGACGGAAACGTCATGGCGCTGGATGCTAAGCTGAA 650
BSNT_02628___ 651 TTTTGACAGCAATGCGTTGTACCGACAAAAGGACATTATGGAATACAGAG 700
.||.||||||||||||||.|||.|||||||.|||||||||||||||||||
RBAM_015920__ 651 CTTCGACAGCAATGCGTTATACAGACAAAAAGACATTATGGAATACAGAG 700
BSNT_02628___ 701 ATTTGGATGAAGAAGATCCGAAAGAAATTGAAGCGTCCAAATATGATCTA 750
||||.|||||||||||||||||||||||.||||||||.|||||.|||.||
RBAM_015920__ 701 ATTTAGATGAAGAAGATCCGAAAGAAATCGAAGCGTCAAAATACGATTTA 750
BSNT_02628___ 751 AGCTACATTTCCCTTGATGGAAATATCGGCTGTATGGTAAACGGCGCGGG 800
||||||||||||||||||||||||||||||||.|||||||||||||||||
RBAM_015920__ 751 AGCTACATTTCCCTTGATGGAAATATCGGCTGCATGGTAAACGGCGCGGG 800
BSNT_02628___ 801 GCTTGCAATGTCCACGATGGATATTATCAAGCATTATGGAGGAGAACCGG 850
.|||||||||||.||.||||||||.||.||.||.||.||.||||||||.|
RBAM_015920__ 801 TCTTGCAATGTCTACAATGGATATCATTAAACACTACGGCGGAGAACCTG 850
BSNT_02628___ 851 CCAACTTCCTTGATGTGGGCGGCGGTGCAACCGCTGAAAAAGTCACGGAA 900
|.||||||||||||||.||.|||||.||||||||.||||||||.||||||
RBAM_015920__ 851 CAAACTTCCTTGATGTCGGGGGCGGCGCAACCGCAGAAAAAGTTACGGAA 900
BSNT_02628___ 901 GCATTTAAAATCATTCTTTCTGATCAAAACGTTAAAGGGATTTTTGTCAA 950
||.|||||||||||||||||.|||||||||||.|||||.|||||.||.||
RBAM_015920__ 901 GCTTTTAAAATCATTCTTTCCGATCAAAACGTAAAAGGAATTTTCGTTAA 950
BSNT_02628___ 951 CATTTTCGGCGGCATTATGAAATGTGATGTCATCGCAGAAGGGGTTGTTG 1000
.||||||||.|||||.|||||.||||||||||||||.||.||.|||||||
RBAM_015920__ 951 TATTTTCGGAGGCATCATGAAGTGTGATGTCATCGCCGAGGGCGTTGTTG 1000
BSNT_02628___ 1001 AAGCGACTAGACAAGTTGGTTTGACATTGCCGCTTGTCGTCCGTCTTGAA 1050
|||||||.||||||||.||.||||||||||||||.|||||.||.||||||
RBAM_015920__ 1001 AAGCGACGAGACAAGTCGGATTGACATTGCCGCTGGTCGTGCGCCTTGAA 1050
BSNT_02628___ 1051 GGCACAAACGTGGATCTAGGGAAGAAAATCCTTAGTGAATCAGGATTAAA 1100
||.||||||||.|||.||||.|||||||||||.|.|||||||||.|||||
RBAM_015920__ 1051 GGGACAAACGTAGATTTAGGAAAGAAAATCCTGAATGAATCAGGCTTAAA 1100
BSNT_02628___ 1101 CATTACATCTGCGGAATCAATGGCTGACGGCGCGCAGAAAATCGTATCCT 1150
|||.||||||||||||||||||||.||||||||.||||||||||||||||
RBAM_015920__ 1101 CATCACATCTGCGGAATCAATGGCAGACGGCGCACAGAAAATCGTATCCT 1150
BSNT_02628___ 1151 TAGTTTAA 1158
|||||||.
RBAM_015920__ 1151 TAGTTTAG 1158
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