Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02627 and RBAM_015910

See Amino acid alignment / Visit BSNT_02627 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:30
# Commandline: needle
#    -asequence dna-align/BSNT_02627___ylqH.1.9828.seq
#    -bsequence dna-align/RBAM_015910___ylqH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02627___ylqH-RBAM_015910___ylqH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02627___ylqH-RBAM_015910___ylqH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02627___ylqH
# 2: RBAM_015910___ylqH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     223/282 (79.1%)
# Similarity:   223/282 (79.1%)
# Gaps:           0/282 ( 0.0%)
# Score: 879.0
# 
#
#=======================================

BSNT_02627___      1 ATGAAAGAGCAGACACCGATCAGAAAAGCTGTTGCTCTCCATTATGACGA     50
                     |||||||||||.||.|||.|.||||.||||||.||.||.|||||.|||..
RBAM_015910__      1 ATGAAAGAGCAAACGCCGTTAAGAAGAGCTGTCGCCCTGCATTACGACCG     50

BSNT_02627___     51 ACAAAAAGACAAGGCGCCGAGAGTGATTGCCACAGGGAAGGGCCATGTAG    100
                     .||.||||||.|.||.||||..||..|.||.|||||.|.|||.||.||.|
RBAM_015910__     51 GCAGAAAGACCAAGCCCCGAAGGTTGTCGCAACAGGCAGGGGGCACGTGG    100

BSNT_02627___    101 CTGACAACATTATCAAAGAAGCGAAAAAAGCAGGGGTCCCGATTCAAGAA    150
                     |.||.||.|||||.||||||||..|.||.||.||||||||.|||||.|||
RBAM_015910__    101 CGGAAAATATTATAAAAGAAGCTGAGAAGGCTGGGGTCCCCATTCAGGAA    150

BSNT_02627___    151 GATCGGACCCTTGTCGAATTAATGCGCCATTTGACGGTAGATGATCAAAT    200
                     ||.||.||||||||||||||||||||||||||||||||.||.|||||.||
RBAM_015910__    151 GACCGAACCCTTGTCGAATTAATGCGCCATTTGACGGTTGACGATCAGAT    200

BSNT_02627___    201 CCCTGAAGCTCTTTATGAAACGGTAGCCGAGATTTTTTCATTCATTTACA    250
                     .||.||.||.|||||||||||.||.|||||.|||||||||||..||||||
RBAM_015910__    201 ACCGGAGGCGCTTTATGAAACCGTTGCCGAAATTTTTTCATTTGTTTACA    250

BSNT_02627___    251 AATTGGACGAAAGCGTAAAAAACAAAAAATAG    282
                     .|.|||||||||.|.|.||||||.|||||||.
RBAM_015910__    251 GACTGGACGAAACCCTGAAAAACGAAAAATAA    282


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