Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02612 and RBAM_015800

See Amino acid alignment / Visit BSNT_02612 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:29
# Commandline: needle
#    -asequence dna-align/BSNT_02612___ylxM.1.9828.seq
#    -bsequence dna-align/RBAM_015800___ylxM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02612___ylxM-RBAM_015800___ylxM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02612___ylxM-RBAM_015800___ylxM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02612___ylxM
# 2: RBAM_015800___ylxM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     298/333 (89.5%)
# Similarity:   298/333 (89.5%)
# Gaps:           0/333 ( 0.0%)
# Score: 1350.0
# 
#
#=======================================

BSNT_02612___      1 ATGTCACTCGAAAAGACAACGAGAATGAATTATCTGTTTGATTTTTATCA     50
                     |||||.||||||||.||.|||||||||||.|||.|.|||||.||.|||||
RBAM_015800__      1 ATGTCGCTCGAAAAAACGACGAGAATGAACTATTTATTTGACTTCTATCA     50

BSNT_02612___     51 GTCGTTGTTGACGTCAAAACAGAAGAGCTATATGTCGCTTTATTATTTGG    100
                     |||||||.|||||||||||||.||||||||||||||||||||||||.|||
RBAM_015800__     51 GTCGTTGCTGACGTCAAAACAAAAGAGCTATATGTCGCTTTATTATCTGG    100

BSNT_02612___    101 ACGATTTCTCCCTAGGCGAAATAGCCGAAGAATATGAGGTTTCAAGACAA    150
                     |||||||||||||.||.||||||||||||||.|||||.||||||||.|||
RBAM_015800__    101 ACGATTTCTCCCTTGGTGAAATAGCCGAAGAGTATGACGTTTCAAGGCAA    150

BSNT_02612___    151 GCTGTTTATGATAACATCAAACGAACAGAAGCAATGCTTGAACAATATGA    200
                     ||.|||||.||||||||||||||.||.|||||.|||||||||||||||||
RBAM_015800__    151 GCCGTTTACGATAACATCAAACGGACTGAAGCGATGCTTGAACAATATGA    200

BSNT_02612___    201 AGAAAAGCTGCTCCTTTTGAAAAAGTTTCAGGAGCGTAAAGAGATGTTTA    250
                     ||||||.|||||||||||.|||||||||||||||||||||||.|||||||
RBAM_015800__    201 AGAAAAACTGCTCCTTTTTAAAAAGTTTCAGGAGCGTAAAGAAATGTTTA    250

BSNT_02612___    251 ATAAGCTGAAGGAGCTTGCTTCCGGTTCAAAAGAAGAGGAAGAAATTACA    300
                     ..||||||||.||||||||||||||.|...|.|||||||||.||||.||.
RBAM_015800__    251 CAAAGCTGAAAGAGCTTGCTTCCGGGTTGCAGGAAGAGGAAAAAATGACG    300

BSNT_02612___    301 GCTCTGATTGAAGCGCTTGAGAAATTAGATTAG    333
                     |||||||||||||||||||||||||||||||||
RBAM_015800__    301 GCTCTGATTGAAGCGCTTGAGAAATTAGATTAG    333


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