Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02610 and RBAM_015780

See Amino acid alignment / Visit BSNT_02610 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:29
# Commandline: needle
#    -asequence dna-align/BSNT_02610___ftsY.1.9828.seq
#    -bsequence dna-align/RBAM_015780___ftsY.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02610___ftsY-RBAM_015780___ftsY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02610___ftsY-RBAM_015780___ftsY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02610___ftsY
# 2: RBAM_015780___ftsY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 991
# Identity:     814/991 (82.1%)
# Similarity:   814/991 (82.1%)
# Gaps:           2/991 ( 0.2%)
# Score: 3350.0
# 
#
#=======================================

BSNT_02610___      1 ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTC     50
                     |||||||||||||||||||||||||||||||||||.|||||||||||.||
RBAM_015780__      1 ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACGAAACAGACAGACTC     50

BSNT_02610___     51 CGTATCTGAAAAGTTTAAGGATGGCCTTGAAAAAACAAGAAACTCCTT-T     99
                     |||.||||||||.|||||.|||||.|||||||||||||||||.||||| |
RBAM_015780__     51 CGTCTCTGAAAAATTTAAAGATGGTCTTGAAAAAACAAGAAATTCCTTCT    100

BSNT_02610___    100 CAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGA    149
                     | |||.||||||||.||.||.||.|||||.|||||.|||||.||.|||||
RBAM_015780__    101 C-AAATAAAGTGAACGAACTCGTCTCCCGCTACCGGAAAGTCGACGAGGA    149

BSNT_02610___    150 TTTCTTCGAAGAGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTA    199
                     |||||||||.||||||||.||.||.||.||..||||.||.||.|||||||
RBAM_015780__    150 TTTCTTCGAGGAGCTTGAGGAAGTGCTGATTGGCGCTGACGTAGGTTTTA    199

BSNT_02610___    200 CAACCGTTATGGAATTAATAGATGAACTGAAAAAAGAAGTCAAACGCAGA    249
                     |||||||||||||..|.||.|||||.||.|||||||||||.||.|..|.|
RBAM_015780__    200 CAACCGTTATGGAGCTGATTGATGAGCTCAAAAAAGAAGTGAAGCTGAAA    249

BSNT_02610___    250 AATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGT    299
                     ||.||.||||||||..|||||||.|||||.||.||||||||.||.||.||
RBAM_015780__    250 AACATCCAAGATCCTCAGGAAGTGCAGTCCGTCATTTCTGAAAAGCTTGT    299

BSNT_02610___    300 CGAGATTTATAACAGCGGAGATGAGCAAATTTCAGAACTGAACATCCAGG    349
                     |||.||||||||||||||.||.||.||.|||||.|||.|.||.||.||||
RBAM_015780__    300 CGACATTTATAACAGCGGCGACGAACAGATTTCTGAATTAAATATTCAGG    349

BSNT_02610___    350 ATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAA    399
                     |.|.|||..|.|||||.||.||.||.||.||.||||||||||||||.|||
RBAM_015780__    350 ACGAGCGCCTGAACGTTATTCTGCTTGTCGGGGTAAACGGCGTCGGAAAA    399

BSNT_02610___    400 ACAACAACGATCGGAAAGCTTGCCCATAAAATGAAACAAGAAGGAAAATC    449
                     ||.||||||||||||||.|||||||||||..||||..|.|||||.|||||
RBAM_015780__    400 ACGACAACGATCGGAAAACTTGCCCATAAGCTGAAGAATGAAGGCAAATC    449

BSNT_02610___    450 TGTCGTACTTGCCGCCGGAGACACTTTCAGAGCGGGAGCCATTGAACAAC    499
                     .||.||.||.||.||||||||||||||||||||.||.||.||||||||.|
RBAM_015780__    450 CGTTGTGCTCGCTGCCGGAGACACTTTCAGAGCCGGGGCGATTGAACAGC    499

BSNT_02610___    500 TGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCT    549
                     |.|||||.|||||.|||||||||||.||||||||||||||.|||.|.||.
RBAM_015780__    500 TTGAAGTGTGGGGGGAGCGTACAGGCGTGCCTGTCATTAAACAGGCTGCC    549

BSNT_02610___    550 GGAAGCGATCCGGCGGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGC    599
                     ||||||||.||.||.||.||.||.||.|||||.||.||.||.||.|||||
RBAM_015780__    550 GGAAGCGACCCTGCTGCGGTTATTTATGATGCCGTACACGCGGCTAAAGC    599

BSNT_02610___    600 AAGAAATGCCGATGTATTAATTTGTGATACGGCAGGTCGTCTCCAAAACA    649
                     ||||...||.|||||..|.||||||||||||||.||.||.||.||.||.|
RBAM_015780__    600 AAGAGGAGCGGATGTGCTGATTTGTGATACGGCCGGCCGCCTTCAGAATA    649

BSNT_02610___    650 AAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGA    699
                     |||||||..|.||||||||||||||||||||.||||||||.||||||.|.
RBAM_015780__    650 AAGTAAACTTAATGAAAGAGCTTGAAAAAGTCAAACGTGTCATCGAACGC    699

BSNT_02610___    700 GAAGTTCCTGAAGCTCCGCATGAGGTGCTGCTTGCCCTTGATGCCACGAC    749
                     |||||.|||||.||||||||||||||.||.|||||.||.||.||.|||||
RBAM_015780__    700 GAAGTGCCTGAGGCTCCGCATGAGGTTCTCCTTGCGCTGGACGCGACGAC    749

BSNT_02610___    750 CGGCCAAAATGCAATGGCTCAGGCAAAAGAGTTCTCTAAAGCAACAAATG    799
                     .|||||||||||.|||||.|||||.|||||.|||||.|||||.||.||||
RBAM_015780__    750 AGGCCAAAATGCGATGGCGCAGGCGAAAGAATTCTCCAAAGCGACGAATG    799

BSNT_02610___    800 TTACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAGGGCGGTATC    849
                     |.||.||.||.||.|||||||||||||||||.||.||.||.|||||||||
RBAM_015780__    800 TGACGGGTATCGCGTTAACGAAGCTTGACGGCACCGCTAAAGGCGGTATC    849

BSNT_02610___    850 GTCCTTGCGATTCGCAACGAGCTTCACATCCCGGTTAAACTAGTCGGTTT    899
                     |||.|.|||||.|||||.||||||||||||||.||.|||||.|||||..|
RBAM_015780__    850 GTCTTGGCGATCCGCAATGAGCTTCACATCCCCGTGAAACTGGTCGGCCT    899

BSNT_02610___    900 AGGAGAAAAAGTTGATGATCTTCAGGAATTTGATCCAGAATCCTATGTGT    949
                     .||||||||.|||||.|||||.|||...||||||.|||||||.||.||.|
RBAM_015780__    900 CGGAGAAAAGGTTGACGATCTCCAGCGGTTTGATGCAGAATCTTACGTAT    949

BSNT_02610___    950 ACGGACTCTTTTCAGATTTAGTGGAAAAAGCCGACGATTAA    990
                     ||||.||||||||.||||||||.|||||||||||.||||||
RBAM_015780__    950 ACGGTCTCTTTTCTGATTTAGTTGAAAAAGCCGAGGATTAA    990


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02610 and RBAM_015780

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
