Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_02605 and RBAM_015730

See Amino acid alignment / Visit BSNT_02605 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:27
# Commandline: needle
#    -asequence dna-align/BSNT_02605___fabD.1.9828.seq
#    -bsequence dna-align/RBAM_015730___fabD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02605___fabD-RBAM_015730___fabD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02605___fabD-RBAM_015730___fabD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02605___fabD
# 2: RBAM_015730___fabD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 958
# Identity:     755/958 (78.8%)
# Similarity:   755/958 (78.8%)
# Gaps:           8/958 ( 0.8%)
# Score: 2972.0
# 
#
#=======================================

BSNT_02605___      1 ATGAGTAAGATTGCATTTTTATTCCCGGGTCAGGGATCACAATTTATCGG     50
                     |||||||||||||||||||||||.||.||.|||||||||||||.||||||
RBAM_015730__      1 ATGAGTAAGATTGCATTTTTATTTCCCGGACAGGGATCACAATATATCGG     50

BSNT_02605___     51 CATGGGAAAAGAGCTTTATGA----GCAGGTGCCTGCTGCAAAGCGTCTG     96
                     .|||||||||||.||.||.||    |.||..||.|    ||||.|||.|.
RBAM_015730__     51 TATGGGAAAAGACCTGTACGAACGCGAAGAAGCGT----CAAAACGTATT     96

BSNT_02605___     97 TTTGATGAAGCCGATGAAACGTTAGAAACAAAGCTCAGCTCGCTTATTTT    146
                     |||||||||||.|||||||||.|.|||||||||||.||||||||.|||||
RBAM_015730__     97 TTTGATGAAGCGGATGAAACGCTTGAAACAAAGCTGAGCTCGCTCATTTT    146

BSNT_02605___    147 TGAGGGGGCTGCTGAAGAATTAACACTTACATACAATGCGCAGCCTGCTT    196
                     |||.||.|..||.|||||||||||.|||||||||||||||||||||||..
RBAM_015730__    147 TGAAGGTGACGCCGAAGAATTAACCCTTACATACAATGCGCAGCCTGCGC    196

BSNT_02605___    197 TGCTTACGACAAGCATCGCTGTTCTTGAGAAATTTAAAGAATCTGGCATT    246
                     ||.|.||.||.||||||||.||..|.||.||.|||||||||||..||||.
RBAM_015730__    197 TGTTGACAACGAGCATCGCCGTATTGGAAAAGTTTAAAGAATCCAGCATC    246

BSNT_02605___    247 ACACCTGATTTCACAGCAGGACACAGCCTTGGTGAATATTCTGCACTGGT    296
                     ||.|||||||||||.||.||.||||||||.||.||||||||.||.||.||
RBAM_015730__    247 ACGCCTGATTTCACCGCCGGCCACAGCCTCGGAGAATATTCGGCGCTTGT    296

BSNT_02605___    297 TGCGGCTGGCGCTCTGTCTTTCAAAGATGCTGTTTATACCGTCAGAAAAC    346
                     ||||||.||.||..||.|.||.||||||||.|||||.||.||.|||||||
RBAM_015730__    297 TGCGGCGGGAGCGATGACATTTAAAGATGCCGTTTACACGGTAAGAAAAC    346

BSNT_02605___    347 GCGGAGAGTTTATGAATGAAGCGGTACCGGCTGGCGAAGGAGCAATGGCT    396
                     |.|||||.||.|||||||||||.||.|||||.||.|||||.||.|||||.
RBAM_015730__    347 GGGGAGAATTCATGAATGAAGCCGTGCCGGCCGGAGAAGGCGCCATGGCC    396

BSNT_02605___    397 GCGATTCTCGGCATGGATGCTGAAGCATTAAAGCAAGTAACCGATAAAGT    446
                     ||.|||||||||||||||||.||..||||.||..|.||.||.|||.||||
RBAM_015730__    397 GCTATTCTCGGCATGGATGCGGAGTCATTGAAAAAGGTGACGGATCAAGT    446

BSNT_02605___    447 CACAGAGGAAGGCAACCTTGTACAGCTTGCGAATCTCAACTGTCCTGGCC    496
                     .||.||..|.||..|.||.|||||||||||.||..|.|||||.||.||||
RBAM_015730__    447 GACGGAAAACGGTCATCTCGTACAGCTTGCAAACTTGAACTGCCCCGGCC    496

BSNT_02605___    497 AAATCGTCATTTCCGGAACAGCTAAAGGGGTTGAGCTTGCATCTGAACTG    546
                     |.|||||.|||||||||||.||.|||||.||.|||||.||.||.||....
RBAM_015730__    497 AGATCGTAATTTCCGGAACGGCAAAAGGCGTGGAGCTGGCTTCAGAGGAA    546

BSNT_02605___    547 GCAAAAGAGAACGGCGCAAAACGCGCAATTCCGCTTGAAGTAAGCGGTCC    596
                     ||.|||.|.|||||.||||||||.|||||.||..|.|||||||||||.||
RBAM_015730__    547 GCGAAAAACAACGGAGCAAAACGGGCAATCCCATTAGAAGTAAGCGGACC    596

BSNT_02605___    597 GTTCCATTCTGAACTGATGAAACCGGCTGCTGAAAAGCTGAAAGAGGTAT    646
                     |||||||||||||.|.|||||.|||||.||..||||.||..|.|||||..
RBAM_015730__    597 GTTCCATTCTGAATTAATGAAGCCGGCAGCGCAAAAACTCGAGGAGGTGC    646

BSNT_02605___    647 TGGACGCCTGTGACATAAAAGACGCTGACATTCCGGTCATCTCAAATGTT    696
                     |...|||||||||..|||||.|.||.|...||||.||.||.|||||.|||
RBAM_015730__    647 TCAGCGCCTGTGAGTTAAAAAATGCGGCTGTTCCCGTGATTTCAAACGTT    696

BSNT_02605___    697 TCTGCTGACGTGATGACTGAAAAAGCAGATATCAAAGAAAAACTTATTGA    746
                     ||.||||||||.|||||.|||||||..||||||||..|||||||.||.||
RBAM_015730__    697 TCGGCTGACGTTATGACAGAAAAAGACGATATCAAGAAAAAACTGATCGA    746

BSNT_02605___    747 GCAGCTTTACTCTCCGGTTCGTTTTGAGGAAAGCATTAACAAGCTGATCG    796
                     .|||||.|||||.||.|||||.|||||.||||.|||||||||.|||||.|
RBAM_015730__    747 ACAGCTGTACTCACCTGTTCGCTTTGAAGAAACCATTAACAAACTGATTG    796

BSNT_02605___    797 CAGAGGGTGTTACGACTTTTATTGAAATCGGTCCCGGAAAAGTGCTTTCA    846
                     ..||.||.||.|||||.|||.||||||||||.||.|||||||||||||||
RBAM_015730__    797 ACGAAGGCGTCACGACGTTTGTTGAAATCGGGCCGGGAAAAGTGCTTTCA    846

BSNT_02605___    847 GGCCTTGTGAAAAAAGTAAATAGACGGTTAAAAACAATTGCTGTATCAGA    896
                     |||||||||||||||||.||..|.||..|.||||||||.||.||.||.||
RBAM_015730__    847 GGCCTTGTGAAAAAAGTGAACCGCCGCCTTAAAACAATCGCGGTTTCTGA    896

BSNT_02605___    897 TCCGGAAACGATCGAGCTGGCAATTCAAACGCTTAAGGAGGAGAATGATA    946
                     .|..|||||.|||||.|||||.|||||||||||.||||||||||||.|..
RBAM_015730__    897 CCATGAAACCATCGAACTGGCGATTCAAACGCTGAAGGAGGAGAATCAGG    946

BSNT_02605___    947 ATGCTTAA    954
                     ||||||||
RBAM_015730__    947 ATGCTTAA    954


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02605 and RBAM_015730

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
