Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02602 and RBAM_015700
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:27
# Commandline: needle
# -asequence dna-align/BSNT_02602___recG.1.9828.seq
# -bsequence dna-align/RBAM_015700___recG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02602___recG-RBAM_015700___recG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02602___recG-RBAM_015700___recG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02602___recG
# 2: RBAM_015700___recG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2077
# Identity: 1635/2077 (78.7%)
# Similarity: 1635/2077 (78.7%)
# Gaps: 56/2077 ( 2.7%)
# Score: 6441.5
#
#
#=======================================
BSNT_02602___ 1 GTGAAACAACATCAGCAAACTAGTATAGCTAACATTAAGGGTATTGGGCC 50
||||.|||.||||||||||||||||||||..|.||||||||.||||||||
RBAM_015700__ 1 GTGACACACCATCAGCAAACTAGTATAGCGGAAATTAAGGGCATTGGGCC 50
BSNT_02602___ 51 GGAAACAGAAAAAACATTACACGAACTCGGTATTTATGACATTTCTGATC 100
||||||||||||||||||.||||||||.|||||.||||||||||||||||
RBAM_015700__ 51 GGAAACAGAAAAAACATTGCACGAACTTGGTATCTATGACATTTCTGATC 100
BSNT_02602___ 101 TTCTGAATTATTTCCCTTATCGCTATGATGACTACGAGCTGAGGGATTTA 150
|||||||||||||||||||.||.|||||||||||.|||||||||||||||
RBAM_015700__ 101 TTCTGAATTATTTCCCTTACCGTTATGATGACTATGAGCTGAGGGATTTA 150
BSNT_02602___ 151 GAAGAAGTAAAGCATGATGAAAGAGTCACAGTTGAAGGGAAGGTTCATTC 200
|||||||||||.|||||.||||||||.||.||.|||||||||||||||||
RBAM_015700__ 151 GAAGAAGTAAAACATGAAGAAAGAGTGACGGTAGAAGGGAAGGTTCATTC 200
BSNT_02602___ 201 AGAGCCTTCTCTTACCTATTACGGAAAAAAACGAAACAGGCTGACATTCA 250
|||.||||||||||||||||||||.|||||||||||||||||||||||||
RBAM_015700__ 201 AGAACCTTCTCTTACCTATTACGGCAAAAAACGAAACAGGCTGACATTCA 250
BSNT_02602___ 251 GGCTTCTGGTCGGCCACTATTTAATTACAGCCGTATGTTTTAACCGGCCT 300
||.|.||.||||||.|.|||||||||||.||.||.||.||||||||.||.
RBAM_015700__ 251 GGGTGCTTGTCGGCAATTATTTAATTACCGCGGTCTGCTTTAACCGTCCC 300
BSNT_02602___ 301 TATTTGAAGAAGCAGCTTTCGCTCGGCTCTGTGGTGACGGTTTCAGGTAA 350
||.||.||.|||.|.||..||.|.||.|||||.||.|||.|.||.||.||
RBAM_015700__ 301 TACTTAAAAAAGAAACTGACGTTAGGTTCTGTCGTCACGATATCCGGGAA 350
BSNT_02602___ 351 ATGGGACAAGCACCGCCAAACCATCTCTGTTCAGGAGTTGAAAAACGGGC 400
||||||.||.|||.|.||.|||.|.||.||.|||||.||.||||||||.|
RBAM_015700__ 351 ATGGGATAAACACAGACAGACCGTTTCCGTGCAGGAATTAAAAAACGGTC 400
BSNT_02602___ 401 CGCATCAAGAAGACAAAAGCATTGAACCAGTGTATTCTGTGAAAGAAAAT 450
|.|||||||||||.|||||||||||.||.||.||||||||.||||||||.
RBAM_015700__ 401 CTCATCAAGAAGATAAAAGCATTGAGCCTGTTTATTCTGTTAAAGAAAAC 450
BSNT_02602___ 451 GTTACCGTCAAAATGATGAGGCGGTTTATTCAGCAGGCGCTGACCCAATA 500
||.|||||.|||||||||||.|||||||||.||.|.||||
RBAM_015700__ 451 GTCACCGTAAAAATGATGAGACGGTTTATTAAGGAAGCGC---------- 490
BSNT_02602___ 501 TGCAGACTCACTT-----------CCTGATCCTCTTCCGGAAAAGCTAAG 539
|||||..|||.|| || |||||.|||||.|||||..|.||
RBAM_015700__ 491 TGCAGCATCATTTGGACAGTGCGGCC-GATCCGCTTCCTGAAAAATTGAG 539
BSNT_02602___ 540 AAAAAGCTATAAACTGCCTGACTATTATCAAGCGTTAAAAGCA----ATG 585
||...||||.||.||||||||.||..|.||.||..| ||| |||
RBAM_015700__ 540 AATCCGCTACAAGCTGCCTGATTACAAACATGCCCT----GCAGACGATG 585
BSNT_02602___ 586 CACCAGCCTGAAACAAGGGAAGCATTAAAGCTTGCCAGACGGCGGTTTGT 635
||.|||||||||||.||||||.|.|||.|||..||.|||||.||||||||
RBAM_015700__ 586 CATCAGCCTGAAACGAGGGAATCGTTACAGCAGGCAAGACGCCGGTTTGT 635
BSNT_02602___ 636 TTATGAAGAATTTTTGTTGTTTCAGTTGAAAATGCAGGCGTTCCGAAAGG 685
|||.||.|||||.||.||.||||||.|||||||||||||||||||.||.|
RBAM_015700__ 636 TTACGAGGAATTCTTATTATTTCAGCTGAAAATGCAGGCGTTCCGTAAAG 685
BSNT_02602___ 686 CGGAAAGAGAGCAGACACAAGGGATACGGCAGC---GTTTTTCAAAC-GA 731
|||||||.||.|||.||.||||.|| |||| ||.||||...| ||
RBAM_015700__ 686 CGGAAAGGGAACAGTCAAAAGGCAT----CAGCCATGTGTTTCCTGCTGA 731
BSNT_02602___ 732 AGAACTCATG-AGATTTATCA-AAAGCCTCCCGTTTCCCCTCACAAACGC 779
|.|.||| | .|.|||..|| |.|||||.||||||.|.|||||.|.|||
RBAM_015700__ 732 AAAGCTC--GCCGCTTTCACAGACAGCCTGCCGTTTTCGCTCACGACCGC 779
BSNT_02602___ 780 CCAGTCACGCGTTCTTCGCGAAATAACAGCAGACATGTCTTCTCCATACA 829
.|||.|.||.||.|||||.|||||.||.||.||.|||.|.||.||.|||.
RBAM_015700__ 780 ACAGACGCGTGTGCTTCGGGAAATTACCGCTGATATGACATCCCCTTACC 829
BSNT_02602___ 830 GAATGAACCGTCTTCTTCAAGGGGACGTTGGATCAGGAAAAACGGCAGTC 879
|||||||||||||.||.|||||.||.||.||.|||||.||||||||.|||
RBAM_015700__ 830 GAATGAACCGTCTGCTGCAAGGTGATGTCGGTTCAGGGAAAACGGCCGTC 879
BSNT_02602___ 880 GCCGCCATTGCACTGTATGCCGCGATCCTATCCGGATACCAAGGAGCGCT 929
||||||||.||..|||||||.|||||..|.||.||.||.||.||.||..|
RBAM_015700__ 880 GCCGCCATCGCTTTGTATGCTGCGATTTTGTCGGGGTATCAGGGGGCATT 929
BSNT_02602___ 930 CATGGTGCCGACAGAAATTCTGGCCGAGCAGCATGCTGATTCGCTCGTTT 979
.|||||||||||.||||||.|||||||.||||||||.|||||.|||||.|
RBAM_015700__ 930 AATGGTGCCGACTGAAATTTTGGCCGAACAGCATGCGGATTCTCTCGTAT 979
BSNT_02602___ 980 CGCTATTTGAAAAATG-GGACGTCAGCGTTGCTCTTTTGACAAGCTCTGT 1028
||.|.|||| .||||| .||.||.|...|.||.||||||||.||.|||||
RBAM_015700__ 980 CGTTGTTTG-CAAATGAAGATGTAAATATCGCGCTTTTGACGAGTTCTGT 1028
BSNT_02602___ 1029 TAAAGGGAAGCGGCGAAAAGAACTGCTTGAGCGTCTTGCGGCGGGTGAGA 1078
.|||||.||||||||.|..||.||..|.|||||.|||||....||.||||
RBAM_015700__ 1029 CAAAGGAAAGCGGCGCAGGGAGCTTTTGGAGCGGCTTGCTCTCGGAGAGA 1078
BSNT_02602___ 1079 TTGATATTCTTGTAGGAACCCACGCTTTAATCCAAGACGAGGTGGAGTTT 1128
||||||||.|.|||||.|||||.|||||||||||.||.||.|||||.||.
RBAM_015700__ 1079 TTGATATTTTAGTAGGGACCCATGCTTTAATCCAGGATGAAGTGGAATTC 1128
BSNT_02602___ 1129 AAGGCGCTGAGTCTCGTTATTACTGATGAACAGCACAGATTTGGAGTTGA 1178
||.||||||||.||.||||||||.||.||.||||||.|.||.||.||.||
RBAM_015700__ 1129 AAAGCGCTGAGCCTTGTTATTACGGACGAGCAGCACCGGTTCGGGGTCGA 1178
BSNT_02602___ 1179 GCAGCGCAAAAAGCTTCGGAACAAAGGGCAGGATCCCGATGTTCTCTTTA 1228
.|||||||||||.||...|||.|||||.||||||||.|||||.||.||||
RBAM_015700__ 1179 ACAGCGCAAAAAACTCAAGAATAAAGGTCAGGATCCGGATGTGCTGTTTA 1228
BSNT_02602___ 1229 TGACAGCCACTCCAATCCCAAGAACGTTAGCGATCACAGTGTTCGGTGAA 1278
||||||||||.||.||.||.||||||.|.||.||.||.||.|||||.|||
RBAM_015700__ 1229 TGACAGCCACCCCGATTCCGAGAACGCTGGCCATTACCGTCTTCGGAGAA 1278
BSNT_02602___ 1279 ATGGATGTATCTGTCATCGATGAGATGCCGGCTGGACGAAAGAGAATCGA 1328
||||||||.||.||.||.|||||.|||||.||.||.|||||...||||||
RBAM_015700__ 1279 ATGGATGTTTCCGTGATAGATGAAATGCCCGCGGGGCGAAAACAAATCGA 1328
BSNT_02602___ 1329 AACCTATTGGGTAAAACATGACATGCTGGATCGTATATTGGCATTTGTCG 1378
|||.||||||||.|||||.|||||||||||.||.||.|||||.|||.|.|
RBAM_015700__ 1329 AACGTATTGGGTGAAACACGACATGCTGGAGCGGATTTTGGCTTTTATAG 1378
BSNT_02602___ 1379 AAAAAGAATTAAAGCAAGGCAGGCAGGCTTATATCATCTGTCCGCTGATT 1428
|||||||..|.|||||.||.|||||.||.|||.|.|||||.|||||.|||
RBAM_015700__ 1379 AAAAAGAGCTGAAGCAGGGAAGGCAAGCCTATGTTATCTGCCCGCTCATT 1428
BSNT_02602___ 1429 GAAGAATCAGACAAGCTTGATGTGCAAAACGCCATTGACGTGTACAATAT 1478
|||||.||.||.||.||.|||||.||.||.||.||||||||.||.||.||
RBAM_015700__ 1429 GAAGAGTCGGATAAACTGGATGTACAGAATGCGATTGACGTATATAACAT 1478
BSNT_02602___ 1479 GCTTTCTGATATTTTTCGGGGAAAATGGAATGTCGGCCTTATGCATGGAA 1528
|||.|||||..|||..||.||.|||||||||||||||||.|||||.||.|
RBAM_015700__ 1479 GCTGTCTGACGTTTACCGCGGTAAATGGAATGTCGGCCTGATGCACGGGA 1528
BSNT_02602___ 1529 AGCTGCATTCCGATGAAAAAGACCAGGTCATGAGAGAATTCAGCGCAAAT 1578
||||.|||||.|||||||||||.|||||.|||||||||||||||||.|||
RBAM_015700__ 1529 AGCTTCATTCTGATGAAAAAGATCAGGTGATGAGAGAATTCAGCGCCAAT 1578
BSNT_02602___ 1579 CACTGTCAAATTCTCGTATCAACCACTGTTGTGGAGGTTGGCGTGAATGT 1628
||.|||||..|.||.||.|||||.||.||.||.||.||.||.|||||.||
RBAM_015700__ 1579 CAATGTCAGGTACTTGTGTCAACAACCGTCGTAGAAGTCGGGGTGAACGT 1628
BSNT_02602___ 1629 TCCGAATGCAACAATTATGGTGATTTATGACGCCGACCGTTTCGGACTAT 1678
.||||||||.||.||||||||.||.|||||||||||||||||||||.|||
RBAM_015700__ 1629 GCCGAATGCGACGATTATGGTCATCTATGACGCCGACCGTTTCGGATTAT 1678
BSNT_02602___ 1679 CACAGCTTCACCAGCTGCGCGGCCGTGTTGGACGGGGTGAGCATCAATCT 1728
|.|||||.||.|||||.||||||||.||.||.|||||.||.||.||||||
RBAM_015700__ 1679 CTCAGCTCCATCAGCTCCGCGGCCGGGTCGGGCGGGGAGACCACCAATCT 1728
BSNT_02602___ 1729 TTCTGTATTCTGATGGCTGATCCAAAATCAGAAACAGGGAAAGAACGGAT 1778
|||||.||..|||||||.|||||.|||||.|||||.|||||.||||||||
RBAM_015700__ 1729 TTCTGCATCTTGATGGCAGATCCGAAATCCGAAACCGGGAAGGAACGGAT 1778
BSNT_02602___ 1779 GAGGATCATGTCGGAGACCAATGACGGTTTCGAGCTGTCTGAAAAGGATC 1828
|||.||||||||||||||.||.|||||.||||||||||||||||||||.|
RBAM_015700__ 1779 GAGAATCATGTCGGAGACAAACGACGGCTTCGAGCTGTCTGAAAAGGACC 1828
BSNT_02602___ 1829 TGGAACTGAGAGGTCCCGGTGATTTCTTCGGGAAAAAACAAAGCGGAATG 1878
|.||||||.|.||.|||||||||||||||||.||||||||.|||||.|||
RBAM_015700__ 1829 TTGAACTGCGCGGCCCCGGTGATTTCTTCGGAAAAAAACAGAGCGGTATG 1878
BSNT_02602___ 1879 CCGGAATTTAAAGTGGCGGACATGGTTCATGATTACAGAGCGCTTGAAAC 1928
||.||.||.||.||||||||.|||||||||||.||||||||..|.|||||
RBAM_015700__ 1879 CCCGAGTTCAAGGTGGCGGATATGGTTCATGACTACAGAGCTTTGGAAAC 1928
BSNT_02602___ 1929 GGCAAGGCAGGATGCTGCGAATCTTGTGGCTTCTGACGCGTTCTGGAAGG 1978
|||..|.||||||||.||.|||||.|||.||||.||.|||||.|||||.|
RBAM_015700__ 1929 GGCCCGCCAGGATGCAGCCAATCTGGTGTCTTCAGAGGCGTTTTGGAAAG 1978
BSNT_02602___ 1979 A-GCCGGAATAC-----GCTGTGTTAAGAGATGAATTGCTGAAGAGCGGA 2022
| |.| |||||| |||| .|.|.|.||||.||....|||||.
RBAM_015700__ 1979 ATGAC-GAATACCGCATGCTG-----CGCGGTCAATTACTTTCAAGCGGC 2022
BSNT_02602___ 2023 GTAATGGACGGGGAAAAATTAAGCTGA 2049
||..||||.|||||.||.|||||||||
RBAM_015700__ 2023 GTCCTGGAAGGGGAGAAGTTAAGCTGA 2049
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