Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02595 and RBAM_015630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:26
# Commandline: needle
# -asequence dna-align/BSNT_02595___yloS.1.9828.seq
# -bsequence dna-align/RBAM_015630___thiN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02595___yloS-RBAM_015630___thiN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02595___yloS-RBAM_015630___thiN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02595___yloS
# 2: RBAM_015630___thiN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 664
# Identity: 489/664 (73.6%)
# Similarity: 489/664 (73.6%)
# Gaps: 38/664 ( 5.7%)
# Score: 1802.0
#
#
#=======================================
BSNT_02595___ 1 ATGAAAACAATTAATATCGTTGCGGGAGGCCCGAAAAATCTCATTCCCGA 50
|||||.|||||.||||||||||||||.||||||....|.||.||||||||
RBAM_015630__ 1 ATGAAGACAATCAATATCGTTGCGGGCGGCCCGCGGGAGCTTATTCCCGA 50
BSNT_02595___ 51 TCTAACCGGCTATACGGATGAACACACGCTTTGGATCGGTGTTGACAAAG 100
||||.|||..||.||.||.|.|.|.|||...|||.||||.||.||.||||
RBAM_015630__ 51 TCTATCCGAATACACTGACGGAGATACGACGTGGGTCGGAGTCGATAAAG 100
BSNT_02595___ 101 GCACCGTCACTCTCTTAGATGCCGGGATCATTCCTGTTGAAGCCTTCGGA 150
|.||.||..||||.||.||.|||||.||||||||....|||||.|||||.
RBAM_015630__ 101 GGACGGTTGCTCTTTTGGAAGCCGGAATCATTCCGCAGGAAGCTTTCGGT 150
BSNT_02595___ 151 GATTTTGACAGCATAACGGAGCAAGAACGCCGGCGAATAGAAAAAGCCGC 200
||||||||||||||.|||||..|.||.|.|..||..||..|||||||.||
RBAM_015630__ 151 GATTTTGACAGCATTACGGAAGAGGAGCTCATGCAGATTCAAAAAGCGGC 200
BSNT_02595___ 201 TCCCGCCCTTCATGTGTATCAAGCAGAAAAAGATCAAACAGATTTAGACC 250
.||.|||||.|||||||||||.||.|||||||||.|.||.|||.|.||.|
RBAM_015630__ 201 GCCGGCCCTCCATGTGTATCAGGCGGAAAAAGATTATACCGATCTTGAAC 250
BSNT_02595___ 251 TCGCCCTTGATTGGGCGCTGGAAAAGCAGCCGGATATTATTCAGATTTTC 300
||||||||||.|||||..|..||||..|.|||||.|..||||.|||.|||
RBAM_015630__ 251 TCGCCCTTGACTGGGCTTTACAAAAAGAACCGGAAACCATTCGGATATTC 300
BSNT_02595___ 301 GGCATTACAGGCGGCAGAGCTGATCATTTTTTAGGAAACATTCAGCTACT 350
||..|.||.|||||.|||||.|||||.||||||||.|||||.|||||.||
RBAM_015630__ 301 GGTGTGACGGGCGGAAGAGCCGATCACTTTTTAGGGAACATCCAGCTGCT 350
BSNT_02595___ 351 GTATAGAGGTGTAAAAACGAACATAAAAA--------TTAGGCTGATAGA 392
||| ||||..|..||||||.|| |.|.||||||.||
RBAM_015630__ 351 GTA--------TAAAGCCTTACATAAGAATACCGATCTCAAGCTGATCGA 392
BSNT_02595___ 393 CAAACAAAATCATATTCAAATGTTCCCTCCTGGTGAATATGATATTGAGA 442
....||.|||.|.|||||.||||||...||.||....|||...|||||
RBAM_015630__ 393 TCGGCAGAATGACATTCAGATGTTCGGGCCCGGCCGTTATACAATTGA-- 440
BSNT_02595___ 443 AGGATGAAAATAAG--------CGATATATCTCCTTCATACCGTTTTCCG 484
|.||.||| ||.|||||.||.|||||.||||||.|.|
RBAM_015630__ 441 ------AGAAAAAGCGCGCAGACGCTATATTTCTTTCATTCCGTTTACGG 484
BSNT_02595___ 485 AA--GACATACATGAGCTGACCCT-GACCGGTTTTAAATATCCTCTAAAT 531
|| |.||.|| |..|||||.|| || |||||||||||||||.||..||
RBAM_015630__ 485 AAGCGGCAGAC--GGCCTGACACTCGA-CGGTTTTAAATATCCCCTTGAT 531
BSNT_02595___ 532 AATTGTCATATTACGCTCGGTTCAACACTATGTATTAGTAACGAACTCAT 581
||||||||||||.|.||.|||||.||||||||||||||||||||||||||
RBAM_015630__ 532 AATTGTCATATTCCTCTGGGTTCCACACTATGTATTAGTAACGAACTCAT 581
BSNT_02595___ 582 TCATTCACGAGGTACTTTTTCGTTTGCAAAAGGCATATTAATAATGATAA 631
||||||||||||||||||||||||||||||||||||||||||||||.|||
RBAM_015630__ 582 TCATTCACGAGGTACTTTTTCGTTTGCAAAAGGCATATTAATAATGGTAA 631
BSNT_02595___ 632 GAAGCACGGATTAA 645
|.|||.|||||||.
RBAM_015630__ 632 GGAGCGCGGATTAG 645
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