Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02593 and RBAM_015620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:26
# Commandline: needle
# -asequence dna-align/BSNT_02593___rpe.1.9828.seq
# -bsequence dna-align/RBAM_015620___rpe.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02593___rpe-RBAM_015620___rpe.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02593___rpe-RBAM_015620___rpe.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02593___rpe
# 2: RBAM_015620___rpe
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 664
# Identity: 492/664 (74.1%)
# Similarity: 492/664 (74.1%)
# Gaps: 23/664 ( 3.5%)
# Score: 1816.5
#
#
#=======================================
BSNT_02593___ 1 ATGATAAAGGTTGCACCATCTATTCTTTCCGCTGATTTTGCCGCTTTAGG 50
|||||.||||||||.|||||.|||||||||||.||||||||..|..|.||
RBAM_015620__ 1 ATGATTAAGGTTGCGCCATCAATTCTTTCCGCCGATTTTGCTTCACTGGG 50
BSNT_02593___ 51 CAATGAGATTAAAGATGTAGAAAAAGGCGGAGCCGATTGTATTCATATTG 100
|.|.||.||||||||.||.||||||||.||.||.||.|.|||.|||||||
RBAM_015620__ 51 CGAGGAAATTAAAGACGTGGAAAAAGGAGGGGCGGACTATATCCATATTG 100
BSNT_02593___ 101 ATGTTATGGACGGCCATTTTGTCCCGAATATCACAATCGGTCCGCTGATT 150
||||.|||||.||||||||.|||||.||.||.||||||||.|||||.||.
RBAM_015620__ 101 ATGTCATGGATGGCCATTTCGTCCCTAACATTACAATCGGGCCGCTTATC 150
BSNT_02593___ 151 GTAGAAGCAGTCCGGCCGGTAACGGATCTGCCGCTTGATGTCCATTTAAT 200
||.|||||.|||||.|||||.||.|||||||||||.|||||||||.|.||
RBAM_015620__ 151 GTTGAAGCCGTCCGTCCGGTGACTGATCTGCCGCTGGATGTCCATCTTAT 200
BSNT_02593___ 201 GATAGAAGAGCCGGATCGTTATATCCCGGCTTTTGCGAAAGCAGGCGCAG 250
|||.|||.|.|||||.||.||.||||||||.||.||.|||||.||.||.|
RBAM_015620__ 201 GATTGAAAACCCGGACCGCTACATCCCGGCATTCGCAAAAGCCGGTGCGG 250
BSNT_02593___ 251 ATATCCTGTCTGTACATGCTGAGGCATGTCCGCACCTGCACCGTACCATC 300
|.|||||.||.||.|||||||||||.||||||||.||.|||||.|||||.
RBAM_015620__ 251 ACATCCTTTCCGTTCATGCTGAGGCGTGTCCGCATCTTCACCGGACCATT 300
BSNT_02593___ 301 CAGCTCATTAAAGAGCAAGGAGTGAAGGCCGGAGTAGTTCTAAACCCGCA 350
||..|.||.||||||||.||.||.||.||.|||||.||.||.||.|||||
RBAM_015620__ 301 CAATTAATAAAAGAGCAGGGGGTAAAAGCGGGAGTTGTGCTCAATCCGCA 350
BSNT_02593___ 351 TACTCCTGTTCAAGTCATCGAGCATGTTTTCGACGATCTTGATCTTGTTC 400
|||.||.||.|||.|.||.||.|||||..||||.||.|||||.|||||.|
RBAM_015620__ 351 TACGCCCGTCCAAATGATTGAACATGTGATCGAGGAGCTTGACCTTGTGC 400
BSNT_02593___ 401 TTTTAATGACGGTGAACCCGGGCTTCGGCGGCCAGAAATTTATTCATTCA 450
|.|||||||||||.|||||.||.||.|||||.|||...||.||||||||.
RBAM_015620__ 401 TGTTAATGACGGTTAACCCCGGTTTTGGCGGACAGCGCTTCATTCATTCG 450
BSNT_02593___ 451 GTCCTTCCTAAGATAAAAGAGGTTAAGCGAATGGCGGATGAAAAAGGAAA 500
||.||.||.||.||.....||||.||.|...||||.||.||.|||||
RBAM_015620__ 451 GTTCTGCCGAAAATCCGTCAGGTCAAACAGCTGGCTGAGGAGAAAGG--- 497
BSNT_02593___ 501 AAAA-------GATCTGTTAATTGAAGTAGACGGCGGCGTCAACAAAGAA 543
||.||.|||||.||.||.|||||.|||||.||.|.||||
RBAM_015620__ 498 ----CCTGTCTGAGCTTTTAATCGAGGTGGACGGAGGCGTTAATATAGAA 543
BSNT_02593___ 544 ACCGCTCCGCTCGTCATTGAAGCGGGCGCAAATTTACTCGTTGCCGGTTC 593
||.|||||..|...||.||||||||||||.||..|.||.||||||||.||
RBAM_015620__ 544 ACAGCTCCTTTATGCACTGAAGCGGGCGCCAACCTGCTTGTTGCCGGGTC 593
BSNT_02593___ 594 AGCTGTTTATGGGCAGTCTGACCGCAAAAAAGCAATTTCTGAAATCAGAG 643
.||.||.|||...|||.|.||.||.||||||||.||..||||.|||.||
RBAM_015620__ 594 TGCCGTATATAATCAGCCGGATCGGAAAAAAGCCATCGCTGACATCCGA- 642
BSNT_02593___ 644 GAA---GTAAATAA 654
|| ||||
RBAM_015620__ 643 -AACGCGTAA---- 651
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