Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02591 and RBAM_015610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:26
# Commandline: needle
# -asequence dna-align/BSNT_02591___yloQ.1.9828.seq
# -bsequence dna-align/RBAM_015610___engC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02591___yloQ-RBAM_015610___engC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02591___yloQ-RBAM_015610___engC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02591___yloQ
# 2: RBAM_015610___engC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 920
# Identity: 700/920 (76.1%)
# Similarity: 700/920 (76.1%)
# Gaps: 52/920 ( 5.7%)
# Score: 2678.5
#
#
#=======================================
BSNT_02591___ 1 ATGCCTGAGGGCAAAATTATTAAGGCGCTAAGCGGCTTTTACTATGTACT 50
||||||||||||||||||||.||.|||.|||||||.||.||.|||||..|
RBAM_015610__ 1 ATGCCTGAGGGCAAAATTATAAAAGCGTTAAGCGGATTCTATTATGTCTT 50
BSNT_02591___ 51 GGATGAATCAGAGGATTCAGATAAAG-TAATACAATGCAGAGGAAGAGGC 99
||||||||||.|||| .||| |.||.||||||||.||..|.|||
RBAM_015610__ 51 GGATGAATCACAGGA-------CAAGATCATTCAATGCAGGGGCCGGGGC 93
BSNT_02591___ 100 ATTTTCAGAAAAAACAAAATTACCCCTCTTGTCGGTGATTATGTTGTGTA 149
||||||||||||||.|||||.||.||.||.|||||.|||||||..||.||
RBAM_015610__ 94 ATTTTCAGAAAAAATAAAATAACGCCCCTGGTCGGCGATTATGCCGTTTA 143
BSNT_02591___ 150 TCAAGCTGAAAATGACAAAGAAGGATATTTAATGGAAATTAAAGAAAGAA 199
|||.|||||||||||.||||||||.||..|..|||||||.||||||.|||
RBAM_015610__ 144 TCAGGCTGAAAATGATAAAGAAGGCTACCTGCTGGAAATCAAAGAACGAA 193
BSNT_02591___ 200 CCAACGAGCTTATCAGGCCGCCAATTTGCAACGTTGATCAAGCGGTCCTT 249
|.||||||||.|||||||||||.||||..||.||.|||||.||.||.|||
RBAM_015610__ 194 CAAACGAGCTGATCAGGCCGCCGATTTCAAATGTCGATCAGGCCGTTCTT 243
BSNT_02591___ 250 GTTTTCTCAGCGGTTCAGCCTTCTTTCAGCACGGCATTGCTCGACCGCTT 299
||.||.||.||.||||||||..|.|||||||||.|.||..|.|||||.||
RBAM_015610__ 244 GTCTTTTCTGCCGTTCAGCCGGCGTTCAGCACGTCTTTATTGGACCGTTT 293
BSNT_02591___ 300 CCTGGTTCTCGTTGAGGCCAATGATATTCAGCCGATTATATGCATTACTA 349
.||.||.||.||.||.|||||.|..|||||.|||||.||.|||||.||.|
RBAM_015610__ 294 TCTCGTCCTTGTGGAAGCCAACGGCATTCACCCGATCATCTGCATAACCA 343
BSNT_02591___ 350 AAATGGATCTGA-TTGAAG-------ATCAAGATACAGAAGATACGATAC 391
||||||| ||.| .||.|| |||.| ||||..||||||
RBAM_015610__ 344 AAATGGA-CTTAGCTGCAGACGGGGAATCGA-------AAGAGGCGATAC 385
BSNT_02591___ 392 AAGCCTATGCAGAAGACTATCGGAATATTGGTTATGACGTATACCTTACC 441
...|.||.|...|||||||||.|...||.||||||||||||||..|.||.
RBAM_015610__ 386 TTTCTTACGTGAAAGACTATCAGGCGATCGGTTATGACGTATATGTGACG 435
BSNT_02591___ 442 TCCTCTAAGGACCAAGACA---GTTTAACGGACATCATCCCGCATT---- 484
||.||.||.| ||.||| |||||||.| |||||
RBAM_015610__ 436 TCATCAAAAG---AAAACAGCGGTTTAACAG----------GCATTGTGA 472
BSNT_02591___ 485 -----TTC-AGGATAAAACAACGGTATTTGCCGGTCAGTCCGGTGTTGGA 528
||| ||.|.|||||||||||.|||||||||||||||||.||.|||
RBAM_015610__ 473 AACACTTCGAGAACAAAACAACGGTGTTTGCCGGTCAGTCCGGAGTCGGA 522
BSNT_02591___ 529 AAATCCTCGCTTCTCAACGCGATCAGTCCGGAGCTCGGATTGAGAACAAA 578
|||||.||||||.|.||.||||||||.||||||||.|...|||.||||||
RBAM_015610__ 523 AAATCTTCGCTTTTAAATGCGATCAGCCCGGAGCTTGAGCTGAAAACAAA 572
BSNT_02591___ 579 CGAGATTTCCGAGCATTTGGGCCGCGGGAAACACACAACCCGCCACGTGG 628
||||||||||..|||||||||.|||||.|||||.||.||.|||||.||||
RBAM_015610__ 573 CGAGATTTCCACGCATTTGGGACGCGGAAAACATACGACGCGCCATGTGG 622
BSNT_02591___ 629 AGCTGATTCACACGTCCGGAGGTTTGGTTGCAGATACGCCGGGATTCAGC 678
||||.|||||.||.||.||.|||.|||||||.|||||.|||||.|||||.
RBAM_015610__ 623 AGCTCATTCATACATCAGGCGGTCTGGTTGCGGATACTCCGGGGTTCAGT 672
BSNT_02591___ 679 TCGCTTGAATTTACAGACATTGAGGAAGAAGAGCTGGGCTATACCTTCCC 728
||||||||||||||.|.||||||||||||||||||||||...||.|||||
RBAM_015610__ 673 TCGCTTGAATTTACCGGCATTGAGGAAGAAGAGCTGGGCAGCACGTTCCC 722
BSNT_02591___ 729 AGATATCAGAGAAAAAAGCGCTTCATGCAAATTTAGAGGCTGTTTACATC 778
.||.||||||||||.||||||.||.||||||||.|||||||||.|.||||
RBAM_015610__ 723 TGAGATCAGAGAAATAAGCGCCTCTTGCAAATTCAGAGGCTGTCTGCATC 772
BSNT_02591___ 779 TGAAAGAGCCGAAATGCGCGGTGAAACAAGCTGTTGGAGACGGGGA-ATT 827
|.||||||||||||||||||||.||.|||||.||.|.|||.||.|| |||
RBAM_015610__ 773 TTAAAGAGCCGAAATGCGCGGTAAAGCAAGCGGTGGAAGAAGGAGAGATT 822
BSNT_02591___ 828 AAAGCAGTATCGCTATGACCATTATGTTGAATTTATGACGGAGATTAAAG 877
.|||.|||.||||||||.|||||....|||||||||..|||.||.||||
RBAM_015610__ 823 -CAGCCGTACCGCTATGAGCATTACAAAGAATTTATGCAGGAAATAAAAG 871
BSNT_02591___ 878 ACAGAAAGCCGAGGTATTAG 897
|.|||||||||||||||||.
RBAM_015610__ 872 AGAGAAAGCCGAGGTATTAA 891
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