Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02588 and RBAM_015580
See
Amino acid alignment /
Visit
BSNT_02588 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:26
# Commandline: needle
# -asequence dna-align/BSNT_02588___yloN.1.9828.seq
# -bsequence dna-align/RBAM_015580___yloN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02588___yloN-RBAM_015580___yloN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02588___yloN-RBAM_015580___yloN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02588___yloN
# 2: RBAM_015580___yloN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1100
# Identity: 926/1100 (84.2%)
# Similarity: 926/1100 (84.2%)
# Gaps: 16/1100 ( 1.5%)
# Score: 3952.0
#
#
#=======================================
BSNT_02588___ 1 ATGGCAGAACTTAATAAA-ACAAAAGTAAGAAAAGAATTGCGGACAGAGC 49
|||.||.|| ||||.||| ||||..|||.|.|||||..|||||||.||||
RBAM_015580__ 1 ATGACACAA-TTAAAAAAGACAAGCGTACGGAAAGAGCTGCGGACTGAGC 49
BSNT_02588___ 50 GTCCGTCGATTTATTCTTTTGAATTAGACGAAATTAAACAATGGCTGACA 99
..|||||.|||||.||||||||||||||.|||||.||||||||||||||.
RBAM_015580__ 50 AGCCGTCCATTTACTCTTTTGAATTAGATGAAATCAAACAATGGCTGACC 99
BSNT_02588___ 100 GACAACGGAGAGAAACCGTTCCGTGCGGCTCAGATTTTTGAATGGCTATA 149
||.||.||.||.||.||||||||.||.||.|||||||||||||||||.||
RBAM_015580__ 100 GAGAATGGCGAAAAGCCGTTCCGCGCAGCACAGATTTTTGAATGGCTTTA 149
BSNT_02588___ 150 TGAAAAACGCGTATCTTCTTTTGAAGAAATGACAAACCTCTCAAAGGATC 199
|||.||.||.||.|||||.|||||.||||||||||||||||||||....|
RBAM_015580__ 150 TGAGAAGCGGGTTTCTTCATTTGATGAAATGACAAACCTCTCAAAAAGCC 199
BSNT_02588___ 200 TGCGTGAGAAATTAAACACTC-------ACTTTGTGTTAACAACGCTGAA 242
|||||| |||.|||| |.||||||.|.|||||||||||
RBAM_015580__ 200 TGCGTG-------AAAAACTCGAGAGCAATTTTGTGCTGACAACGCTGAA 242
BSNT_02588___ 243 AACGGCTGTTAAACAAACCTCTCAAGACGGTACGATGAAGTTTTTGTTTG 292
|||||||||.|||||.||.|||||||||||.||||||||.|||||.||||
RBAM_015580__ 243 AACGGCTGTAAAACAGACATCTCAAGACGGCACGATGAAATTTTTATTTG 292
BSNT_02588___ 293 AGCTTCATGACGGTTATACCATCGAAACCGTTTTAATGAGACACGAGTAT 342
|||||||||||||||||||.||||||||.|||||||||||||||||||||
RBAM_015580__ 293 AGCTTCATGACGGTTATACGATCGAAACGGTTTTAATGAGACACGAGTAT 342
BSNT_02588___ 343 GGCAATTCTGTATGTGTAACGACACAAGTCGGCTGCCGTATTGGCTGTAC 392
||.|||||||||||||||||||||||.|||||||||||.||.|||||.||
RBAM_015580__ 343 GGTAATTCTGTATGTGTAACGACACAGGTCGGCTGCCGGATCGGCTGCAC 392
BSNT_02588___ 393 ATTCTGTGCGTCAACGCTTGGAGGCTTAAAACGAAACCTTGAAGCGGGGG 442
|||.||.|||||||||||.||.||..|.|||||.||.|||||||||||.|
RBAM_015580__ 393 ATTTTGCGCGTCAACGCTCGGCGGACTGAAACGGAATCTTGAAGCGGGAG 442
BSNT_02588___ 443 AAATTGTCGCTCAAGTAGTCAAAGTGCAAAAAGCTCTTGATGAAACGGAT 492
||||.|||||||||||.||.|||||||||||.||.|||||||||||||||
RBAM_015580__ 443 AAATCGTCGCTCAAGTCGTGAAAGTGCAAAAGGCGCTTGATGAAACGGAT 492
BSNT_02588___ 493 GAACGCGTCAGCTCTGTCGTGATCATGGGAATCGGCGAACCTTTTGATAA 542
||||||||||||||.|||||.||||||||||||||.||.||.||||||||
RBAM_015580__ 493 GAACGCGTCAGCTCAGTCGTCATCATGGGAATCGGAGAGCCGTTTGATAA 542
BSNT_02588___ 543 CTTTAACGAAATGCTCGCTTTCTTGAAAATCATTAACCATGACAAGGGCC 592
.||.||.|||||||||||||||||.|||||||||||||||||.||.||.|
RBAM_015580__ 543 TTTCAATGAAATGCTCGCTTTCTTAAAAATCATTAACCATGATAAAGGGC 592
BSNT_02588___ 593 TGAATATCGGTGCTCGCCATATTACGGTCTCTACGAGTGGAATCATCCCG 642
||||.|||||.||.||.|||||.||.||.||.||.||.||||||||.|||
RBAM_015580__ 593 TGAACATCGGAGCGCGTCATATCACAGTTTCCACCAGCGGAATCATTCCG 642
BSNT_02588___ 643 AAAATTTACGAATTTGCTGATCAGCAAATGCAGATTAACTTTGCAATTTC 692
||.||||||||.||.||.|||||..||||||||||.||.||.||.|||||
RBAM_015580__ 643 AAGATTTACGATTTCGCCGATCAAAAAATGCAGATCAATTTCGCGATTTC 692
BSNT_02588___ 693 TCTGCACGCGCCGAACACAGAAATCAGAAGCCGTTTGATGCCGATTAACA 742
||||||.||.|||||.||.|||||||||||||||.|||||||||||||||
RBAM_015580__ 693 TCTGCATGCTCCGAATACGGAAATCAGAAGCCGTCTGATGCCGATTAACA 742
BSNT_02588___ 743 GAGCATATAAACTGCCTGATCTAATGGAAGCCGTTAAATATTATATTAAT 792
.|||.|||||.||.|||||.||.|||||.|||||.||||||||.||..|.
RBAM_015580__ 743 AAGCCTATAAGCTTCCTGACCTTATGGAGGCCGTCAAATATTACATCGAG 792
BSNT_02588___ 793 AAAACGGGACGCCGCATCAGCTTTGAATACGGGCTGTTCGGAGGCGTAAA 842
|||||.||..|.||.||||||||||||||||||||||||||.||||||||
RBAM_015580__ 793 AAAACAGGCAGACGGATCAGCTTTGAATACGGGCTGTTCGGCGGCGTAAA 842
BSNT_02588___ 843 CGACCAGGTGGAACACGCCGAAGAGCTTGCCGACTTGCTGGAAGGAGTCA 892
.||.|||||.|||||.||.|||||||||||.||..||.|..|||..||.|
RBAM_015580__ 843 TGATCAGGTCGAACATGCAGAAGAGCTTGCAGAACTGTTAAAAGACGTGA 892
BSNT_02588___ 893 AATGCCACGTGAACTTGATTCCGGTAAACTACGTGCCTGAACGGGACTAT 942
|||||||.||.||.||.||||||||||||||.||||||||||||||.||.
RBAM_015580__ 893 AATGCCATGTCAATTTAATTCCGGTAAACTATGTGCCTGAACGGGATTAC 942
BSNT_02588___ 943 GTGCGCACACCGCGTGATCAGATTTTTGCTTTTGAAAAAACGCTGAAATC 992
||.|||||||||.|.|||||||||||.||.||.|||||||||.|.|||||
RBAM_015580__ 943 GTCCGCACACCGAGAGATCAGATTTTCGCATTCGAAAAAACGTTAAAATC 992
BSNT_02588___ 993 CCGCGGAGTAAATGTCACAATCCGAAGAGAGCAAGGACATGACATTGACG 1042
||||||.|||||||||||.|||.|||||||||||||.|||||||||||||
RBAM_015580__ 993 CCGCGGTGTAAATGTCACGATCAGAAGAGAGCAAGGCCATGACATTGACG 1042
BSNT_02588___ 1043 CAGCCTGCGGTCAGCTTCGCGCGAAGGAGCGTCAAGACGAGACGAGGTGA 1092
|.||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015580__ 1043 CGGCCTGCGGTCAGCTTCGCGCGAAGGAGCGTCAAGACGAGACGAGGTGA 1092
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.