Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02585 and RBAM_015550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:25
# Commandline: needle
# -asequence dna-align/BSNT_02585___def.1.9828.seq
# -bsequence dna-align/RBAM_015550___defA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02585___def-RBAM_015550___defA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02585___def-RBAM_015550___defA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02585___def
# 2: RBAM_015550___defA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity: 383/490 (78.2%)
# Similarity: 383/490 (78.2%)
# Gaps: 14/490 ( 2.9%)
# Score: 1469.5
#
#
#=======================================
BSNT_02585___ 1 TTGGCAGTAAAAAAGGTCGTCACACATCCTGCGGAGGTTTTGGAAACACC 50
|||||.||||||||..||||||||||.||.|||||||||.||||||||||
RBAM_015550__ 1 TTGGCTGTAAAAAAAATCGTCACACACCCGGCGGAGGTTCTGGAAACACC 50
BSNT_02585___ 51 TGCGGA--AACCGTGACTGTTTTTGATAAAAAGCTAAAAAAACTGCTTGA 98
|||.|| || |||||.||.|||||||||||..||||||||||||||||
RBAM_015550__ 51 TGCCGATGAA--GTGACAGTGTTTGATAAAAAATTAAAAAAACTGCTTGA 98
BSNT_02585___ 99 TGATATGTACGACACCATGCTTGAAATGGATGGTGTCGGACTGGCAGCGC 148
.|||||||||||.||.|||||.|||||||||||.|||||.||.||.||||
RBAM_015550__ 99 CGATATGTACGATACGATGCTCGAAATGGATGGCGTCGGTCTCGCCGCGC 148
BSNT_02585___ 149 CGCAAATCGGCATTTTAAAAAGAGCGGCCGTTGTAGATATCGGGGATGAC 198
|||||||||||||||||||||||||||||||.||.||.|||||.||.||.
RBAM_015550__ 149 CGCAAATCGGCATTTTAAAAAGAGCGGCCGTCGTGGACATCGGTGAAGAA 198
BSNT_02585___ 199 AGAGGGAGAATTGATCTCGTTAATCCTGAAATTTTAGAAAGAAGCGGCGA 248
||.||..|.||.||.||.||.|||||.|..|||.|.||||..|||||.||
RBAM_015550__ 199 AGCGGCCGGATCGACCTTGTAAATCCGGTTATTCTTGAAAAGAGCGGTGA 248
BSNT_02585___ 249 GCAAACCGGAATTGAAGGATGCTTGAGCTTTCCTGGCGTCTATGGTGATG 298
.||.||||||.|.||.||.||.||.||||||||.||.||.||.||.||||
RBAM_015550__ 249 ACAGACCGGAGTCGAGGGCTGTTTAAGCTTTCCAGGGGTTTACGGCGATG 298
BSNT_02585___ 299 TCAAACGTGCCGATTATGTCAAAGTGCGT----GCGTTTAACCGTCAGGG 344
|||..||..|.|||||.|| |||| || ||.|.|.|||||.|.||
RBAM_015550__ 299 TCACCCGCCCGGATTACGT-AAAG---GTAAAAGCCTATGACCGTAAAGG 344
BSNT_02585___ 345 AAAACCGTTCATTCTGGAAGCGCGA-GGCTTTTTAGCAAGAGCCGTGCAG 393
|||||||||.|||.|.|||||| || ||.|||||.||.||||||||.|||
RBAM_015550__ 345 AAAACCGTTTATTTTAGAAGCG-GAGGGTTTTTTGGCCAGAGCCGTTCAG 393
BSNT_02585___ 394 CATGAAATGGACCACTTAGACGGTGTGCTGTTTACATCTAAAATAAGTAA 443
|||||||||||.||.||||||||..|..|.||.|||||.|||||.|....
RBAM_015550__ 394 CATGAAATGGATCATTTAGACGGCATTTTATTCACATCAAAAATTACGGC 443
BSNT_02585___ 444 ATACTATACAGAAGATGAACTAGCGGATATGGAAGGATGA 483
.|||||.||.|||||.|||||.||.||.||||||||||||
RBAM_015550__ 444 TTACTACACTGAAGAAGAACTGGCAGAAATGGAAGGATGA 483
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