Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02579 and RBAM_015500

See Amino acid alignment / Visit BSNT_02579 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:24
# Commandline: needle
#    -asequence dna-align/BSNT_02579___ylzA.1.9828.seq
#    -bsequence dna-align/RBAM_015500___ylzA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02579___ylzA-RBAM_015500___ylzA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02579___ylzA-RBAM_015500___ylzA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02579___ylzA
# 2: RBAM_015500___ylzA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     264/270 (97.8%)
# Similarity:   264/270 (97.8%)
# Gaps:           0/270 ( 0.0%)
# Score: 1296.0
# 
#
#=======================================

BSNT_02579___      1 ATGACGATTAAACTGATTAATATCGGATTTGGCAATATCATCTCCGCCAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015500__      1 ATGACGATTAAACTGATTAATATCGGATTTGGCAATATCATCTCCGCCAA     50

BSNT_02579___     51 TCGGATGATTTCGATTGTCAGCCCGGAGTCTGCGCCAATCAAACGGATGA    100
                     |||||||||||||||||||||||||||||||||||||||.||.||.||||
RBAM_015500__     51 TCGGATGATTTCGATTGTCAGCCCGGAGTCTGCGCCAATAAAGCGAATGA    100

BSNT_02579___    101 TTCAGGATGCAAGAGACCGCGGAATGCTAATTGACGCTACATACGGACGA    150
                     |.|||||||||||||||||||||||||||||.||||||||||||||||||
RBAM_015500__    101 TCCAGGATGCAAGAGACCGCGGAATGCTAATAGACGCTACATACGGACGA    150

BSNT_02579___    151 AGAACCCGTGCAGTTGTCGTCATGGATAGTGATCACATTATCTTATCTGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015500__    151 AGAACCCGTGCAGTTGTCGTCATGGATAGTGATCACATTATCTTATCTGC    200

BSNT_02579___    201 CGTCCAGCCTGAGACAGTTGCACACAGACTTTCTGTTAAAGAAGAAATTA    250
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_015500__    201 CGTCCAGCCTGAGACAGTTGCACACAGACTTTCTGTGAAAGAAGAAATTA    250

BSNT_02579___    251 TGGATGAAGGGCAGGGGTAA    270
                     ||||||||||||||||||||
RBAM_015500__    251 TGGATGAAGGGCAGGGGTAA    270


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