Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02568 and RBAM_015430
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:23
# Commandline: needle
# -asequence dna-align/BSNT_02568___cysC.1.9828.seq
# -bsequence dna-align/RBAM_015430___cysC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02568___cysC-RBAM_015430___cysC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02568___cysC-RBAM_015430___cysC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02568___cysC
# 2: RBAM_015430___cysC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 604
# Identity: 483/604 (80.0%)
# Similarity: 483/604 (80.0%)
# Gaps: 20/604 ( 3.3%)
# Score: 1935.0
#
#
#=======================================
BSNT_02568___ 1 GTGACAAATCGCGATATTGTATGGCATGAAGCCTCTATCACAAAAGAAGA 50
|||||||||||.|||||.||.||||||||||||||.||.||.||||||||
RBAM_015430__ 1 GTGACAAATCGTGATATCGTGTGGCATGAAGCCTCAATAACGAAAGAAGA 50
BSNT_02568___ 51 GTATCAGCAAAAAAACAAGCATAAAAGCTCCATTCTCTGGCTGACAGGGT 100
.||.|||||.||||||||||||||||||||.||.|||||||||||.||.|
RBAM_015430__ 51 ATACCAGCAGAAAAACAAGCATAAAAGCTCTATCCTCTGGCTGACGGGCT 100
BSNT_02568___ 101 TAAGCGGCTCAGGCAAATCAACCATTGCCAACGCCGCTGCGAGAGAATTG 150
|||||||.|||||.|||||.||.|||||.||||||||.|||.|.||..||
RBAM_015430__ 101 TAAGCGGTTCAGGAAAATCCACGATTGCAAACGCCGCAGCGCGCGAGCTG 150
BSNT_02568___ 151 TTTGAGCAAGGCTACCAAGTCATTGTGCTGGACGGGGATAATATCCGTCA 200
|||||.||||||||.||||||||.|||||.||.||.|||||.|||||.||
RBAM_015430__ 151 TTTGAACAAGGCTATCAAGTCATCGTGCTTGATGGTGATAACATCCGCCA 200
BSNT_02568___ 201 CGGCCTAAATAGGGATCTT-GGTTTTTCTGATGAAGACCGAAAAGAAAAC 249
||||.||||.|.||| ||| ||||||||.|||||.|||||.||.|||||.
RBAM_015430__ 201 CGGCTTAAACAAGGA-CTTAGGTTTTTCCGATGATGACCGCAAGGAAAAT 249
BSNT_02568___ 250 ATCCGCCGGATCGGAGAGGTGGCGAAGCTTTTTGTTCAGCAGGGAACCAT 299
||.|||||.|||||.||.||||||||||||||.|||||||||||||||||
RBAM_015430__ 250 ATACGCCGCATCGGGGAAGTGGCGAAGCTTTTCGTTCAGCAGGGAACCAT 299
BSNT_02568___ 300 TGTGATTACTGCTTTTATCTCTCCTTTCCGCGAGGACAGGCAACAGGTTC 349
.||.||.||.||||||||.|||||.|||||.||||||||..|.|||||..
RBAM_015430__ 300 CGTCATCACGGCTTTTATTTCTCCGTTCCGTGAGGACAGAGATCAGGTGA 349
BSNT_02568___ 350 GCGAGCTTGTGGAAGCGGGCGAATTTAATGAAGTCTACATTAAATGCGAC 399
|.||||||||||.||.||||||||||||||||.|||||.|.|||||||||
RBAM_015430__ 350 GAGAGCTTGTGGCAGAGGGCGAATTTAATGAAATCTACGTGAAATGCGAC 399
BSNT_02568___ 400 CTTGATATTTGTGAACAAAGAGATCCGAAAGGACTTTACAAAAAAGCAAG 449
||.|||||.||||||.|..|.|||||||||||..|.||.|||||||||||
RBAM_015430__ 400 CTCGATATATGTGAAAAGCGCGATCCGAAAGGTTTATATAAAAAAGCAAG 449
BSNT_02568___ 450 AAACGGAGAGATTCCGTTCTTTACAGGAATTGATTCACCTTATGAAGAAC 499
|||.||.||.||||||||||||||.||.||.||.|||||.||||||||.|
RBAM_015430__ 450 AAATGGTGAAATTCCGTTCTTTACGGGGATCGACTCACCGTATGAAGAGC 499
BSNT_02568___ 500 CGGAAGCTCCAGAGCTCGTTCTTGATTCAGGACAGCA----TGACCGTGA 545
||.||||.||.||||||||.|||||||||| ||| |||.||.||
RBAM_015430__ 500 CGAAAGCGCCTGAGCTCGTACTTGATTCAG----GCAAATGTGAACGCGA 545
BSNT_02568___ 546 AGCGTGTA----AAAATCAGCTGATCGAGTTTGTTAAACAAAAATTGAGC 591
||..||.| ||.| |||.|.||.|||||.||| ||.|..|.|||
RBAM_015430__ 546 AGAATGCACCGGAAGA----CTGGTTGACTTTGTGAAA-AACAGCTTAGC 590
BSNT_02568___ 592 TGA- 594
..|
RBAM_015430__ 591 ATAA 594
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