Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02567 and RBAM_015420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:23
# Commandline: needle
# -asequence dna-align/BSNT_02567___sat.1.9828.seq
# -bsequence dna-align/RBAM_015420___sat.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02567___sat-RBAM_015420___sat.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02567___sat-RBAM_015420___sat.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02567___sat
# 2: RBAM_015420___sat
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1164
# Identity: 917/1164 (78.8%)
# Similarity: 917/1164 (78.8%)
# Gaps: 30/1164 ( 2.6%)
# Score: 3559.5
#
#
#=======================================
BSNT_02567___ 1 ATGAGCTTAGCACCACACGGAGGAACATTAGTAAACAGAGTAGATGAATC 50
|||||.||||||||.|||||||||||||||.|.||..|.|||.||| |.|
RBAM_015420__ 1 ATGAGTTTAGCACCGCACGGAGGAACATTAATTAATCGGGTAAATG-AGC 49
BSNT_02567___ 51 A-TATGATGTGAGCGGCA----TTCAAAAAGAAATTGAACTTGATTTAAT 95
| ||||||.|.| || |.||||||||||||||.||||||||.||
RBAM_015420__ 50 AGTATGATCTTA----CATCCGTCCAAAAAGAAATTGAGCTTGATTTGAT 95
BSNT_02567___ 96 TTCTTTCGCGGATTTGGAATTGATCGGTATCGGTGCATACAGCCCGATTG 145
|||.|||||.|||||.||..|||||||.|||||.|..|||||||||||||
RBAM_015420__ 96 TTCGTTCGCTGATTTAGAGCTGATCGGGATCGGGGGGTACAGCCCGATTG 145
BSNT_02567___ 146 AAGGTTTCTTTAATGAAAAAGATTACGTATCTGTAGTCGAAAACATGCGT 195
||||.||.||.|..||||||||||||||.||.||.||.|||||.||||||
RBAM_015420__ 146 AAGGATTTTTCACAGAAAAAGATTACGTGTCAGTCGTTGAAAATATGCGT 195
BSNT_02567___ 196 CTTTCTTCCGGCGTTGTCTGGTCTCTTCCAATCACGCTTCCGGTCGATGC 245
||..|.|||||.|||||||||||.||.||.||||||||||||||||||.|
RBAM_015420__ 196 CTGGCATCCGGGGTTGTCTGGTCCCTGCCGATCACGCTTCCGGTCGATTC 245
BSNT_02567___ 246 GCAAAAAGCAGCGGAACT----GTCACTTGGTGAAACGGTAAAGTTAACG 291
..|||||||.||.||.|| ||| ||.||.|||||.||..|.||.
RBAM_015420__ 246 AGAAAAAGCGGCTGAGCTTGCCGTC----GGCGACACGGTGAAACTGACT 291
BSNT_02567___ 292 TATGAAGGAGAAACATACGGCGTTATCCAAATCGAAGACCTGTACGTGCC 341
||.|..|||||||||||||||||..||.|.||||||||..|.||...|||
RBAM_015420__ 292 TACGGCGGAGAAACATACGGCGTAGTCGACATCGAAGATATTTATACGCC 341
BSNT_02567___ 342 TGACAAACAAAAAGAAGCTGTCAATGTGTACAAAACAGATGA-ACAGGAG 390
.||.||||||||||||||.||..|.||.||.|||||.||||| .|| |.|
RBAM_015420__ 342 GGATAAACAAAAAGAAGCCGTTCACGTATATAAAACCGATGATGCA-GCG 390
BSNT_02567___ 391 CATCCTGGTGTTAAAAA--GCTGTTCAGCCGCGGCAATACATATGTCGGC 438
|||||.||.||.||||| ..|.|||| ||||||.||||.|||||||||
RBAM_015420__ 391 CATCCGGGCGTGAAAAAATTATTTTCA--CGCGGCGATACGTATGTCGGC 438
BSNT_02567___ 439 GGGCCGATTACGTTGATTAAAAAAGCTTCAAAACAGTTCCCTGAATTTAC 488
||||||||.||.||..||||||||||.|||||.|||||.||.||.|||||
RBAM_015420__ 439 GGGCCGATCACATTAGTTAAAAAAGCGTCAAAGCAGTTTCCCGAGTTTAC 488
BSNT_02567___ 489 ATTTGAACCGTTAGAAACGAGACGCCAGTTTGCG--GAAAAAGGCTGGGA 536
|||||||||....||.||.||||| .||.|| || .||||.||||||.|
RBAM_015420__ 489 ATTTGAACCTGCCGATACAAGACG-AAGCTT-CGAACAAAAGGGCTGGAA 536
BSNT_02567___ 537 AACCATTGTCGGTTTCCAAACAAGAAACCCTGTTCACAGAGCGCATGAAT 586
||||||.||||||||||||||.|||||.||.||.|||.|.||.||.||||
RBAM_015420__ 537 AACCATCGTCGGTTTCCAAACGAGAAATCCGGTCCACCGCGCCCACGAAT 586
BSNT_02567___ 587 ACATTCAAAAAACGGCTCTTGAAACAGTAGACGGCTTGTTCTTGAATCCG 636
|.||.||||||||.||.|||||.||.||.||||||.||||.|||||.|||
RBAM_015420__ 587 ATATCCAAAAAACCGCGCTTGAGACGGTTGACGGCCTGTTTTTGAACCCG 636
BSNT_02567___ 637 TTAGTAGGTGAAACAAAATCTGATGACATTCCAGCTGATGTACGGATGGA 686
.|.||.||||||||||||||.|||||||||||.||.|||||..|.|||||
RBAM_015420__ 637 CTCGTCGGTGAAACAAAATCAGATGACATTCCGGCGGATGTCAGAATGGA 686
BSNT_02567___ 687 AAGCTACCAAGTGCTTCTTGATCATTATTACCCGAAAGATCGCGTTTTCC 736
|||||||||.|||||.||.|||||||||||.||||||||.|||||.||||
RBAM_015420__ 687 AAGCTACCAGGTGCTGCTCGATCATTATTATCCGAAAGACCGCGTGTTCC 736
BSNT_02567___ 737 TTGGTGTCTTTTTAGCGGCGATGCGTTATGCAGGCCCGAGAGAAGCAATT 786
|.||.||.|||||.|||||.|||||.|||||.||.|||||||||||.|||
RBAM_015420__ 737 TCGGCGTATTTTTGGCGGCTATGCGGTATGCGGGGCCGAGAGAAGCCATT 786
BSNT_02567___ 787 TTCCACGCGCTTGTCAGAAAGAACTACGGCTGCACACATTTCATCGTCGG 836
||||||||.||||||.|.||.||||||||||||||.|||||.||||||||
RBAM_015420__ 787 TTCCACGCCCTTGTCCGCAAAAACTACGGCTGCACGCATTTTATCGTCGG 836
BSNT_02567___ 837 CCGTGATCATGCAGGTGTAGGCGACTATTACGGAACATACGAAGCACAGG 886
|||.||||||||.||.||.||.||.||.|||||.|||||.|||||.||.|
RBAM_015420__ 837 CCGCGATCATGCCGGCGTCGGTGATTACTACGGCACATATGAAGCGCAAG 886
BSNT_02567___ 887 AGCTGTTTGA-CACATTTAAACCTGAAGAACTCGGAATTACACCGCTGAA 935
|||||||||| || |||||.|.|.||.||||||||.|||||||||.||||
RBAM_015420__ 887 AGCTGTTTGATCA-ATTTACAGCGGATGAACTCGGGATTACACCGATGAA 935
BSNT_02567___ 936 ATTTGAGCACAGCTTCTTCTGTAAAAAATGCGGAAATATGGGAACAGCGA 985
|||.|||||||||||||||||..|.||||||||.||.||||||||.||.|
RBAM_015420__ 936 ATTCGAGCACAGCTTCTTCTGCCAGAAATGCGGCAACATGGGAACGGCCA 985
BSNT_02567___ 986 AAACTTGCCCTCATGGCAGAGAGCATCACGTCATTTTATCAGGCACTAAG 1035
||||.|||||.||||.||.|||..|.|||||||||.|.|||||.||.|||
RBAM_015420__ 986 AAACATGCCCGCATGACAAAGAAGACCACGTCATTCTGTCAGGAACAAAG 1035
BSNT_02567___ 1036 GTAAGAGGTATGCTGAGAGACGGTGTGCTGCCGCCTGCTGAATTCAGTCG 1085
||.||||..||||||.||..|||.||..|||||||.||.||||||||.||
RBAM_015420__ 1036 GTCAGAGAAATGCTGCGAAGCGGCGTCATGCCGCCGGCGGAATTCAGCCG 1085
BSNT_02567___ 1086 AAAAGAAGTAGTAGAAGTGTTAATCAAAGGGATGAAGAAAAAAGAAGAAG 1135
....|||||.||.||.|||||.||.||||||.||||.|..||||||||||
RBAM_015420__ 1086 TCCGGAAGTTGTCGAGGTGTTGATTAAAGGGCTGAAAACGAAAGAAGAAG 1135
BSNT_02567___ 1136 TAGGCGTATCTTAA 1149
.||||||.||||||
RBAM_015420__ 1136 CAGGCGTTTCTTAA 1149
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