Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02566 and RBAM_015410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:23
# Commandline: needle
# -asequence dna-align/BSNT_02566___cysP.1.9828.seq
# -bsequence dna-align/RBAM_015410___cysP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02566___cysP-RBAM_015410___cysP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02566___cysP-RBAM_015410___cysP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02566___cysP
# 2: RBAM_015410___cysP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1076
# Identity: 812/1076 (75.5%)
# Similarity: 812/1076 (75.5%)
# Gaps: 22/1076 ( 2.0%)
# Score: 2967.0
#
#
#=======================================
BSNT_02566___ 1 ATGGAATTAGCCGCTATTTTATTTAGCTTGTTTTTCGCGATGAATATTGG 50
|||||||||||||||||||||||..||.|||||||.||.||||||||.||
RBAM_015410__ 1 ATGGAATTAGCCGCTATTTTATTCTGCCTGTTTTTTGCCATGAATATCGG 50
BSNT_02566___ 51 TGCAAGCGGCGCTGCAGCTTCGATGGGGGTTGCTTACGGCTCCGGAGCCA 100
.||||||||.||.||.|||||.|||||.||.|||||.||.|||||.|||.
RBAM_015410__ 51 AGCAAGCGGAGCCGCGGCTTCAATGGGAGTCGCTTATGGGTCCGGCGCCG 100
BSNT_02566___ 101 TCAAAAAGAAAACCTACGCTTTGATCCTATGCGCAGTCGGTGTCTTTGCC 150
|.|||||||||||.||.||..|||||.|.|||||.|.|||.|||.|..|.
RBAM_015410__ 101 TTAAAAAGAAAACGTATGCGCTGATCATCTGCGCGGCCGGGGTCCTGTCA 150
BSNT_02566___ 151 GGGGCGGTCATTGGCGGAGGCGAGGTTGTAAAAACAATCAGCTCCGGCAT 200
||||||||.||.|||||.||.||.||.||.||.||.||||||..|||.||
RBAM_015410__ 151 GGGGCGGTTATCGGCGGCGGAGAAGTCGTTAAGACGATCAGCGGCGGAAT 200
BSNT_02566___ 201 TATTCCTGAGCAGACGATTACACTGACGATTGTTTGCATCATTATTGGAG 250
.|||||.||.||.||.|||||.||.||.|||||.|||||.|||||.|||.
RBAM_015410__ 201 CATTCCCGAACAAACCATTACGCTCACCATTGTCTGCATTATTATCGGAT 250
BSNT_02566___ 251 CTGCTGCCCTGTCGCTCTTTACTGCTAATCTGCTCGGCATTCCTTTGTCG 300
|.||.||.||.|||.|.||.||.||.|||.|||||||||||||..|||||
RBAM_015410__ 251 CGGCGGCGCTATCGTTATTCACGGCGAATGTGCTCGGCATTCCGCTGTCG 300
BSNT_02566___ 301 ACAAGTGAAGTAACAGTCGGCGCGGTTGTCGGCGTGGGAGTGGCTTATAA 350
||.|||||.||.||.|||||.|||.|||||||.||.||.||.||.||.||
RBAM_015410__ 301 ACGAGTGAGGTCACTGTCGGGGCGATTGTCGGTGTCGGCGTCGCGTACAA 350
BSNT_02566___ 351 AGTATTGTTTGTGAACA--ATCTTCTGATCATTGTGTCATTTTGGGTTTT 398
||||||||||.| ||| |||||.|..||||.|||...||||||||..|
RBAM_015410__ 351 AGTATTGTTTTT--ACAGCATCTTTTAGTCATCGTGAGTTTTTGGGTGCT 398
BSNT_02566___ 399 TGTCCCGCTGTTCGCTTTCGGCTTCACCTATTTCGTATCTAAGCTGTTTC 448
|||.|||.|..||||.|||.|.|||||.|.|.||||.||.|||.|.||..
RBAM_015410__ 399 TGTACCGTTTGTCGCGTTCTGTTTCACGTTTCTCGTCTCGAAGGTATTCA 448
BSNT_02566___ 449 GTTATTTTAAGATTGAAGTAAAATCTTCTAA----AAAGCAAAAAATCCT 494
|||.|.|.||.|||..|||.| .|||.|| ||| ||.||.||..|
RBAM_015410__ 449 GTTCTCTGAATATTCGAGTCA---TTTCGAATCGGAAA-CAGAAGATTTT 494
BSNT_02566___ 495 CGGCGTTGTTTTGTTAGTTGCCGGATTTTTCGAAGCATTCTCTGCCGGCA 544
.||..||||..||.|..||||.||.||||..|||||.||.||.|||||.|
RBAM_015410__ 495 AGGGATTGTGCTGCTGATTGCGGGGTTTTGGGAAGCTTTTTCAGCCGGAA 544
BSNT_02566___ 545 TGAATAACGTGGCGAATGCTGTTGGCCCGTTAGTAGCTGCCGGTGTGCTT 594
||||.||.||.||.|||||.||.|||||.||.||.|||||.||.|||| |
RBAM_015410__ 545 TGAACAATGTCGCAAATGCGGTGGGCCCATTGGTTGCTGCGGGCGTGC-T 593
BSNT_02566___ 595 GA---TGTCGGAAAAGGAACCTTGTATGGAGG-AGCTTTTGTTGCTCTTG 640
.| |||| .||||||||..||||.||||| |.| |||||.|||||.|
RBAM_015410__ 594 CAGCGTGTC--CAAAGGAACGCTGTACGGAGGCATC-TTTGTCGCTCTCG 640
BSNT_02566___ 641 GCGCACTGTTATTAGGCCGGCGTGTGCTAGAAACAAACGGGAAGAAAATT 690
||||.|||.|.|||||.||....|||||.|||||.||||||||.||.|||
RBAM_015410__ 641 GCGCTCTGCTTTTAGGACGCAAAGTGCTTGAAACCAACGGGAAAAAGATT 690
BSNT_02566___ 691 ACGAGATTCTCCAAAGGGGAAGGCATTCT-CTTATCCGGTACAGGAGCCG 739
||||||||.||....||.||||||||.|| ||| ||.||.||.||.||.|
RBAM_015410__ 691 ACGAGATTTTCAGCCGGAGAAGGCATACTGCTT-TCAGGAACCGGCGCGG 739
BSNT_02566___ 740 GACTGGTGATCATCAGTTCTGTATTTGGGATGCCGGTGCCCTTGGCGCAA 789
|.||.||.||.||||||||.||.||.||..|||||||.||.|||||||||
RBAM_015410__ 740 GTCTTGTCATTATCAGTTCCGTCTTCGGTCTGCCGGTCCCATTGGCGCAA 789
BSNT_02566___ 790 GTCACGTCATCGTCTATTATCGGAATAGGCATGGCAAAAAACGGTCCGAA 839
|||||.|||||.||.||||||||.||.||.|||||.||||||||.|||||
RBAM_015410__ 790 GTCACATCATCATCAATTATCGGTATCGGAATGGCCAAAAACGGGCCGAA 839
BSNT_02566___ 840 CGTGTTCCATAAACAAGTTGTTCAAACGATGCTGAAGGTATGGATCGTAT 889
|||.||.||||||.||||.||..||||||||||.||.||||||.||||.|
RBAM_015410__ 840 CGTTTTTCATAAAGAAGTCGTGAAAACGATGCTCAAAGTATGGGTCGTTT 889
BSNT_02566___ 890 CGCCGTTTTTATCTTTATCGATTTCTTATCTGCTTGTATCCTTGTTTTTA 939
|.||||||||.||..|.||||||||.|||.|||||||.|||.||.|.|||
RBAM_015410__ 890 CACCGTTTTTGTCACTGTCGATTTCGTATTTGCTTGTCTCCCTGCTGTTA 939
BSNT_02566___ 940 AAAGCAGATTATTATTCGATCTTTATCATGGTAAGTGTGCTTTTAGCGGC 989
||||.||||||.|||||.||||||||.||||..||.||||||||.||.||
RBAM_015410__ 940 AAAGGAGATTACTATTCCATCTTTATGATGGCCAGCGTGCTTTTGGCAGC 989
BSNT_02566___ 990 GGGCGGTGCCGTCAGCCTGACAAAGGCCATTCGTAAAGAGAGACGCTCAG 1039
.|||||.||||.|||.||||..||.|||||.||.|||||||.||||||.|
RBAM_015410__ 990 TGGCGGAGCCGCCAGTCTGATGAAAGCCATCCGAAAAGAGAAACGCTCTG 1039
BSNT_02566___ 1040 TCCACGAACAAGGCGGGGGAATCTGA 1065
||||.|||||||||||.||.||.|.|
RBAM_015410__ 1040 TCCATGAACAAGGCGGAGGCATTTAA 1065
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