Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02557 and RBAM_015330
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:22
# Commandline: needle
# -asequence dna-align/BSNT_02557___pyrC.1.9828.seq
# -bsequence dna-align/RBAM_015330___pyrC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02557___pyrC-RBAM_015330___pyrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02557___pyrC-RBAM_015330___pyrC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02557___pyrC
# 2: RBAM_015330___pyrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1305
# Identity: 1027/1305 (78.7%)
# Similarity: 1027/1305 (78.7%)
# Gaps: 36/1305 ( 2.8%)
# Score: 4016.0
#
#
#=======================================
BSNT_02557___ 1 ATGTCATATCTCATTAAAAACGGCTGGATACTAAACGAAAATGGTGAAAA 50
|||||.|||||||||||||||||||||||..||||.|||.|.||.|||||
RBAM_015330__ 1 ATGTCTTATCTCATTAAAAACGGCTGGATGTTAAATGAACAGGGAGAAAA 50
BSNT_02557___ 51 A-----ACAGAAGCGGATATCCGAGTGACTGGAGAAACCATCACCGCAAT 95
| ||| |||||||||.||.||.||.|||..|||..|.|.||.
RBAM_015330__ 51 AGTGGCACA-----GGATATCCGGGTAACGGGTGAATTCATTTCGGAAAC 95
BSNT_02557___ 96 CGGCAAGCT--TGATGCA-------ACGGATAATGAAACGGTAATTGATG 136
||| ||| ||| || ||||| ||||||||.||.||.|
RBAM_015330__ 96 CGG---GCTTCTGA--CAGCGAAAGACGGA----GAAACGGTGATCGACG 136
BSNT_02557___ 137 CAAAAGGTTTGCTCGTTTCACCTGGGTTTGTTGATCTCCACGTGCATTTC 186
|..|.||..||.||||||||||.|||.|.||.||.||.||.||.||.|||
RBAM_015330__ 137 CTGAGGGACTGTTCGTTTCACCGGGGCTCGTAGACCTTCATGTCCACTTC 186
BSNT_02557___ 187 AGAGAGCCGGGCGGAGAGAAAAAAGAAACTATTGAAACCGGGGCCAAAGC 236
|||||.||||||||.||||||||||||||.|||||.||.||..|.|||||
RBAM_015330__ 187 AGAGAACCGGGCGGCGAGAAAAAAGAAACCATTGAGACGGGCTCTAAAGC 236
BSNT_02557___ 237 GGCGGCACGCGGCGGCTATACTACAGTAGCAGCAATGCCGAATACGCGGC 286
.|||||.||.|||||||.|||.|||||.|||||.|||||||||||..|||
RBAM_015330__ 237 CGCGGCGCGGGGCGGCTTTACCACAGTCGCAGCCATGCCGAATACAAGGC 286
BSNT_02557___ 287 CGGTTCCTGATACAAAGGAGCAGATGGAATGGGTGCAAAACAGAATTAAA 336
||||.||.|||||.||.|||||||||||||||.||||||||.|.||.|||
RBAM_015330__ 287 CGGTGCCGGATACGAAAGAGCAGATGGAATGGCTGCAAAACCGGATCAAA 336
BSNT_02557___ 337 GAAACATCATGCGTCAGAGTTCTTCCATATGCATCCATTACGATCAGACA 386
|||||.||||..|||||.||||||||.||.||||||||||||||||||||
RBAM_015330__ 337 GAAACCTCATCTGTCAGGGTTCTTCCTTACGCATCCATTACGATCAGACA 386
BSNT_02557___ 387 AATCGGCGATGAAATGACAAACTTTGAAGCGTTAAAAGAAGCCGGGGCAT 436
||.||||||.|||||||||.|.|||.|.|||.|..|.||||||||.||||
RBAM_015330__ 387 AACCGGCGAAGAAATGACAGATTTTAAGGCGCTTCATGAAGCCGGCGCAT 436
BSNT_02557___ 437 TTGCTTTTACAGATGACGGCGTTGGTATACAGACAGCAGGCATGATGTAT 486
|.||.||.||.|||||||||||.||..|.|||||.||.||.|||||||||
RBAM_015330__ 437 TCGCCTTCACCGATGACGGCGTCGGCGTTCAGACGGCCGGAATGATGTAT 486
BSNT_02557___ 487 GAAGCGATGAAACGGGCAGCCGCAATTGACAAGGCGATTGTTGCACATTG 536
|||||.|||||||||||.||..||||..|.||.||||||||.||.|||||
RBAM_015330__ 487 GAAGCCATGAAACGGGCGGCTTCAATGAATAAAGCGATTGTCGCTCATTG 536
BSNT_02557___ 537 CGAGGACAACTC-CTTAATTTACGGAGGAAGCGTACATGAGGGGACATTC 585
.|||||.||||| ||| |||||||||||.|||||.|||||.||..|.||.
RBAM_015330__ 537 TGAGGATAACTCACTT-ATTTACGGAGGGAGCGTGCATGAAGGATCTTTT 585
BSNT_02557___ 586 TCCAAAGCGAACGGGCTAAACGGCATACCTTCTGTGTGTGAATCGGTTCA 635
||.|||||||||||.||.||||||||||||||..|.||||||.||||.||
RBAM_015330__ 586 TCAAAAGCGAACGGCCTGAACGGCATACCTTCCATTTGTGAAGCGGTACA 635
BSNT_02557___ 636 TATTGCCCGCGATGTGCTGCTGGCTGAGGCGGCAAACTGCCATTACCATG 685
|||.|||||.||.||.||||||||.||.|||||...||||||||||||.|
RBAM_015330__ 636 TATCGCCCGTGACGTCCTGCTGGCGGAAGCGGCGGGCTGCCATTACCACG 685
BSNT_02557___ 686 TATGCCATATCAGTACAAAAGAATCTGTCAGGGTCGTACGCGATGCGAAA 735
|.||.||||||||.||.||||||||.|||||.|.||||.|.||.||.|||
RBAM_015330__ 686 TGTGTCATATCAGCACGAAAGAATCCGTCAGAGCCGTAAGAGACGCAAAA 735
BSNT_02557___ 736 AAAGCGGGAATCAGAGTGACAGCAGAAGTGTCGCCGCATCATTTGCTGCT 785
||||||||||||.|.|||||.||.||||||||||||||.||..|||||||
RBAM_015330__ 736 AAAGCGGGAATCCGCGTGACGGCGGAAGTGTCGCCGCACCACCTGCTGCT 785
BSNT_02557___ 786 TTGTGATGAGGACATCCCGGGGCTGGACACAAACTATAAAATGAATCCTC 835
||||||.||.||.||||||||.||.||.||.||.|.||||||||||||.|
RBAM_015330__ 786 TTGTGACGAAGATATCCCGGGACTTGATACCAATTTTAAAATGAATCCGC 835
BSNT_02557___ 836 CGCTCCGCAGCGCAGAAGACAGAGCTGCTTTAATTGAAGGTCTTTTAGAC 885
||||.||||||..|||.|||||||..||..|.||||||||.|||||||||
RBAM_015330__ 836 CGCTTCGCAGCAAAGAGGACAGAGAGGCGCTGATTGAAGGGCTTTTAGAC 885
BSNT_02557___ 886 GGAACAATTGATTTTATTGCAACAGACCATGCACCGCATACGGAAGAAGA 935
||.||.||||||||.||.||.||.||||||||.||||||||.||||||||
RBAM_015330__ 886 GGTACGATTGATTTCATCGCCACTGACCATGCGCCGCATACAGAAGAAGA 935
BSNT_02557___ 936 GAAAAACACAGAAATGAAACTGGCGCCATTCGGAATTGTCGGCTTAGAAA 985
|||||||||.||.|||||.||.|||||.|||||.||.|||||.|||||||
RBAM_015330__ 936 GAAAAACACGGACATGAAGCTTGCGCCTTTCGGGATCGTCGGTTTAGAAA 985
BSNT_02557___ 986 CAGCATTCCCGCTTCTTTACACACACTTTGTCAAAAA-TGGCAGCTGGTC 1034
||||.||.||||||||.||||||||.|||||.||||| .||.|| |||.|
RBAM_015330__ 986 CAGCCTTTCCGCTTCTGTACACACATTTTGTGAAAAACGGGGAG-TGGAC 1034
BSNT_02557___ 1035 GCTGAAGCAGCTGATTGACTACATGACAATCAAGCCATGCGAAGCGTTCG 1084
|||||||||||||.||||.|.||||||..|.||.||.|||||.||.||||
RBAM_015330__ 1035 GCTGAAGCAGCTGGTTGATTTCATGACGGTAAAACCTTGCGAGGCATTCG 1084
BSNT_02557___ 1085 GTCTCCCATATGGAAC-ATTACAAACGGGGCAAG-CTGCGGACATTACGT 1132
.|||.||.||.||||| .||.||...||||| | |.||.|||||.||..
RBAM_015330__ 1085 CTCTTCCGTACGGAACGCTTGCACCGGGGGC--GCCGGCTGACATCACCC 1132
BSNT_02557___ 1133 TAATCGATTTAGAAAAAGAAGCAGTTATAGACAAAGAGACATTTTTATCA 1182
|.||.|||.|.|||||||||||||..||.||||||||.|||||||||||.
RBAM_015330__ 1133 TGATTGATCTGGAAAAAGAAGCAGCCATTGACAAAGATACATTTTTATCT 1182
BSNT_02557___ 1183 AAAGGAAAAAATACACCATTCAACGGCATCAGCTGCACCGGCTGGCCGGT 1232
||||||||||||||.|||||||||...||.|..|||..|||||||||.||
RBAM_015330__ 1183 AAAGGAAAAAATACGCCATTCAACAAGATGAAGTGCTTCGGCTGGCCTGT 1232
BSNT_02557___ 1233 CGCTACAATTGCGGCAGGGAAGCTTGCTTATGAAGAGGGGAGACTTGTCA 1282
.||.||.||.||.||.||.||||||||.||.|||||.||||||||.||||
RBAM_015330__ 1233 TGCAACGATGGCTGCCGGTAAGCTTGCATACGAAGAAGGGAGACTCGTCA 1282
BSNT_02557___ 1283 AATGA 1287
|||||
RBAM_015330__ 1283 AATGA 1287
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