Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02545 and RBAM_015250

See Amino acid alignment / Visit BSNT_02545 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:20
# Commandline: needle
#    -asequence dna-align/BSNT_02545___divIVA.1.9828.seq
#    -bsequence dna-align/RBAM_015250___divIVA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02545___divIVA-RBAM_015250___divIVA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02545___divIVA-RBAM_015250___divIVA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02545___divIVA
# 2: RBAM_015250___divIVA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 495
# Identity:     426/495 (86.1%)
# Similarity:   426/495 (86.1%)
# Gaps:           0/495 ( 0.0%)
# Score: 1854.0
# 
#
#=======================================

BSNT_02545___      1 ATGCCATTAACGCCAAATGATATTCACAACAAGACGTTTACAAAAAGTTT     50
                     ||||||||||||||.||||||||.||.|||||.||||||||||||.||||
RBAM_015250__      1 ATGCCATTAACGCCGAATGATATCCATAACAAAACGTTTACAAAAGGTTT     50

BSNT_02545___     51 TCGCGGATATGATGAAGATGAAGTAAATGAATTCCTAGCCCAAGTCAGAA    100
                     |||||||||||||||||||||||||||||||||..||...||.|||||||
RBAM_015250__     51 TCGCGGATATGATGAAGATGAAGTAAATGAATTTTTAATGCAGGTCAGAA    100

BSNT_02545___    101 AAGATTACGAAATTGTTCTCCGCAAGAAAACTGAGCTTGAAGCGAAAGTC    150
                     |||||||||||||.|..|||||.||.|||||.||||||||.||||||||.
RBAM_015250__    101 AAGATTACGAAATCGCACTCCGTAAAAAAACGGAGCTTGAGGCGAAAGTG    150

BSNT_02545___    151 AATGAGCTAGATGAAAGAATCGGACACTTTGCCAATATTGAGGAAACATT    200
                     ||.|||||.||.||||.||||||.||||||||||||||.||.|||||..|
RBAM_015250__    151 AACGAGCTGGACGAAAAAATCGGCCACTTTGCCAATATCGAAGAAACGCT    200

BSNT_02545___    201 GAATAAATCAATTTTAGTTGCTCAAGAAGCGGCTGAAGACGTAAAACGCA    250
                     |||||||||||||.|.||.||.||.|||||.||.|||||||||||.||||
RBAM_015250__    201 GAATAAATCAATTCTCGTAGCCCAGGAAGCCGCAGAAGACGTAAAGCGCA    250

BSNT_02545___    251 ATTCTCAAAAAGAGGCAAAGCTGATCGTTCGGGAAGCGGAGAAAAACGCT    300
                     |.||.||.|||||.||.|||||||||||.||.|||||.||.|||||.|||
RBAM_015250__    251 ACTCGCAGAAAGAAGCGAAGCTGATCGTCCGTGAAGCAGAAAAAAATGCT    300

BSNT_02545___    301 GATCGCATTATCAACGAATCGTTATCAAAATCAAGAAAAATTGCAATGGA    350
                     ||||||||.|||||.||.|||.|.||.||||||||||||||.||||||||
RBAM_015250__    301 GATCGCATCATCAATGAGTCGCTTTCCAAATCAAGAAAAATCGCAATGGA    350

BSNT_02545___    351 AATTGAAGAGCTGAAAAAACAGTCTAAAGTGTTCAGAACACGTTTCCAAA    400
                     |||.||||||||||||||||||||||||||.|||||||||||||||||||
RBAM_015250__    351 AATCGAAGAGCTGAAAAAACAGTCTAAAGTCTTCAGAACACGTTTCCAAA    400

BSNT_02545___    401 TGCTGATTGAAGCTCAGCTTGATCTTCTGAAAAATGACGATTGGGATCAT    450
                     |||||||||||||.|||||.||.||..||||.||.||.||||||||||||
RBAM_015250__    401 TGCTGATTGAAGCGCAGCTCGACCTGTTGAAGAACGATGATTGGGATCAT    450

BSNT_02545___    451 CTCCTTGAGTATGAAGTCGACGCTGTATTTGAGGAAAAGGAATAA    495
                     ||.||.||.||.|||||||||||.||||||||||||||.||||||
RBAM_015250__    451 CTGCTGGAATACGAAGTCGACGCGGTATTTGAGGAAAAAGAATAA    495


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.