Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02539 and RBAM_015210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:20
# Commandline: needle
# -asequence dna-align/BSNT_02539___ylmE.1.9828.seq
# -bsequence dna-align/RBAM_015210___ylmE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02539___ylmE-RBAM_015210___ylmE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02539___ylmE-RBAM_015210___ylmE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02539___ylmE
# 2: RBAM_015210___ylmE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 700
# Identity: 542/700 (77.4%)
# Similarity: 542/700 (77.4%)
# Gaps: 14/700 ( 2.0%)
# Score: 2032.0
#
#
#=======================================
BSNT_02539___ 1 TTGCGTGTTGTTGATAATTTACGACATATAAACGAACGAATAAACGAAGC 50
||||||||||.||||.|.||||||||||||||||||.|||||||||||||
RBAM_015210__ 1 TTGCGTGTTGCTGATCAATTACGACATATAAACGAAAGAATAAACGAAGC 50
BSNT_02539___ 51 ATGTAACAGATCGGGCCGCAGCTCCGATGAAGTTACGGTTATTGCAGTCA 100
||||||||||||||||||.|||.||||.||.|||||.||.||.||.||.|
RBAM_015210__ 51 ATGTAACAGATCGGGCCGAAGCCCCGAAGATGTTACCGTCATCGCGGTTA 100
BSNT_02539___ 101 CAAAATATGTATCACCTGAAAGAGCACAGGAGGCAGTAGATGCTGGCATC 150
|||||||.||||||.|.|||||.||.||.|||||.||.|||||.||.||.
RBAM_015210__ 101 CAAAATACGTATCAGCCGAAAGGGCTCAAGAGGCCGTTGATGCCGGTATT 150
BSNT_02539___ 151 ACCTGCCTCGGAGAGAATCGGGATGCGGAACTGCTCCGCAAACAGGAATT 200
||..|.||.|||||.||.||||||||.||.||..|||..||.||||||.|
RBAM_015210__ 151 ACAAGTCTGGGAGAAAACCGGGATGCCGAGCTTATCCATAAGCAGGAAGT 200
BSNT_02539___ 201 GATGAAAGGTAATCCGGAATGGCATTTTATCGGCAGTTTGCAATCAAGAA 250
.||.|||||.|..|||||.|||||.||||||||||||.|.||.||.||||
RBAM_015210__ 201 CATCAAAGGCAGCCCGGAGTGGCACTTTATCGGCAGTCTTCAGTCCAGAA 250
BSNT_02539___ 251 AAGCAAAATCTGTCGTCAATG--CG-GTTTCCTATATCCATTCCCTAGAC 297
|.|..||..|.||||| || || ||.||.|||||.||||||.|||||
RBAM_015210__ 251 AGGTGAAGGCCGTCGT---TGACCGTGTATCTTATATTCATTCCTTAGAC 297
BSNT_02539___ 298 CGGCTCTCATTAGCGAAAGAAATTGAAAAACGGGCTGAAG-GTACTGTAC 346
.|.||.|||||.||.|||||.|||||||||||||| |.|| .|.|.||.|
RBAM_015210__ 298 AGACTGTCATTGGCAAAAGAGATTGAAAAACGGGC-GCAGCATGCGGTTC 346
BSNT_02539___ 347 GATGCTTTGTGCAGGTCAATACCTCTCTTGAGCCTTCTAAACACGGCATG 396
|.||.|||||||||||.|||||.||.||||||||.|||||.|||||..||
RBAM_015210__ 347 GCTGTTTTGTGCAGGTGAATACTTCGCTTGAGCCGTCTAAGCACGGTTTG 396
BSNT_02539___ 397 AAAAAAGAAGAAGTCATTCCATTCATACAG-GAGCTTTCCG-GTTTCG-A 443
||||.|||.||.|||||.||.||.|| ||| ||||||||.| ||||.| |
RBAM_015210__ 397 AAAACAGAGGAGGTCATCCCCTTTAT-CAGAGAGCTTTCTGAGTTTAGAA 445
BSNT_02539___ 444 ACATATCCTTGTTGCCGGGCTGATGACAATGGCTCCGCTGACTGATGATC 493
||||.|| |||.|..||.||||||||.||||||||.|||||.||.|||.
RBAM_015210__ 446 ACATTTC--TGTAGAGGGCCTGATGACGATGGCTCCCCTGACAGACGATA 493
BSNT_02539___ 494 AAGATCAGATCAGAAGCTGTTTCAGGTCGCTGAGAGAACTCCGTGACCAG 543
.|||...|||||||..|||.|||.||....||.|.||.||..|.||.|||
RBAM_015210__ 494 CAGAAACGATCAGAGCCTGCTTCCGGCAATTGCGTGATCTGAGGGATCAG 543
BSNT_02539___ 544 GTTCAGAAACTGAACCAGCCGAACGCTCCGTGTACTGAACTGTCGATGGG 593
||.||.||||||||.|||.|.|||||.|||||....|||.||||.|||||
RBAM_015210__ 544 GTGCAAAAACTGAATCAGACAAACGCACCGTGCCGGGAATTGTCAATGGG 593
BSNT_02539___ 594 CATGTCAAATGATTTTGAAATTGCAATTGAAGAAGGAGCTACTTATATTA 643
||||||||||||||.||||||.||..|||||||.||.||.||||.|||.|
RBAM_015210__ 594 CATGTCAAATGATTATGAAATCGCTGTTGAAGAGGGCGCAACTTTTATCA 643
BSNT_02539___ 644 GAATCGGCTCATCGTTAGTCGGAAATGAAACAGGGGGTGTACAGCAATGA 693
||||||||||.||.|||||||||||||||.|.|||||||||.|..|||||
RBAM_015210__ 644 GAATCGGCTCTTCATTAGTCGGAAATGAACCGGGGGGTGTAAACAAATGA 693
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