Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02531 and RBAM_015150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:19
# Commandline: needle
# -asequence dna-align/BSNT_02531___sigE.1.9828.seq
# -bsequence dna-align/RBAM_015150___sigE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02531___sigE-RBAM_015150___sigE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02531___sigE-RBAM_015150___sigE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02531___sigE
# 2: RBAM_015150___sigE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 720
# Identity: 587/720 (81.5%)
# Similarity: 587/720 (81.5%)
# Gaps: 0/720 ( 0.0%)
# Score: 2403.0
#
#
#=======================================
BSNT_02531___ 1 ATGAAAAAACTGAAATTACGGTTGACGCACCTCTGGTATAAGCTGCTGAT 50
|||||||||||.||..|.||..||||..|..|.||||||||...||||||
RBAM_015150__ 1 ATGAAAAAACTTAAGCTGCGTCTGACATATTTGTGGTATAAATGGCTGAT 50
BSNT_02531___ 51 GAAACTTGGGCTGAAAAGTGATGAAGTCTATTACATAGGCGGGAGTGAAG 100
||||||.||.||||||||.||||||||.|||||||||||.||.||.||.|
RBAM_015150__ 51 GAAACTCGGACTGAAAAGCGATGAAGTGTATTACATAGGAGGAAGCGAGG 100
BSNT_02531___ 101 CCCTGCCGCCTCCATTATCTAAAGATGAGGAGCAGGTTTTGTTAATGAAG 150
|.||||||||.||.||.||||||||.|||||||||||..|.|||.|.|||
RBAM_015150__ 101 CGCTGCCGCCGCCTTTGTCTAAAGAAGAGGAGCAGGTGCTCTTATTAAAG 150
BSNT_02531___ 151 CTCCCAAACGGCGATCAGGCGGCGCGCGCCATTCTAATTGAACGCAATTT 200
||.||.|.|||.||||||||||||||.|||||.||.|||||..|.||.||
RBAM_015150__ 151 CTACCGAGCGGGGATCAGGCGGCGCGGGCCATCCTGATTGAGAGAAACTT 200
BSNT_02531___ 201 GCGTCTGGTCGTATATATCGCCCGTAAATTTGAAAATACGGGAATTAATA 250
.|||||.|||||.||.||.|||||.|||||.||||||||.||.||.||.|
RBAM_015150__ 201 ACGTCTTGTCGTTTACATTGCCCGCAAATTCGAAAATACCGGCATCAACA 250
BSNT_02531___ 251 TAGAGGATTTAATCAGCATCGGTACCATCGGACTAATCAAAGCTGTGAAT 300
|.|||||.||||||||||||||.|||||.||..|.||||||||.||.||.
RBAM_015150__ 251 TCGAGGACTTAATCAGCATCGGCACCATTGGTTTGATCAAAGCGGTAAAC 300
BSNT_02531___ 301 ACATTCAATCCAGAAAAGAAAATCAAGCTTGCTACCTATGCCTCCCGGTG 350
||.||.|||||.||||||||||||||.||.||.|||||.||.||.||.||
RBAM_015150__ 301 ACGTTTAATCCGGAAAAGAAAATCAAACTCGCCACCTACGCGTCGCGATG 350
BSNT_02531___ 351 TATAGAAAATGAAATCCTGATGTATTTAAGAAGAAATAACAAAATCCGTT 400
|||.|||||.|||||..|.|||||.||..|..||||.||.||||||||||
RBAM_015150__ 351 TATCGAAAACGAAATTTTAATGTACTTGCGCCGAAACAATAAAATCCGTT 400
BSNT_02531___ 401 CAGAGGTTTCCTTTGATGAACCGCTTAATATTGATTGGGACGGCAATGAG 450
|||||||.|||||||||||||||||.|||||||||||||||||.||.||.
RBAM_015150__ 401 CAGAGGTATCCTTTGATGAACCGCTGAATATTGATTGGGACGGAAACGAA 450
BSNT_02531___ 451 CTTTTGCTTTCTGATGTGCTCGGCACTGACGATGACATCATCACTAAAGA 500
||..|||||||.||||||||||||||.||.|||||.||.||.||.|||||
RBAM_015150__ 451 CTGCTGCTTTCGGATGTGCTCGGCACAGATGATGATATTATTACAAAAGA 500
BSNT_02531___ 501 CATAGAAGCTAACGTCGATAAAAAGCTTTTGAAAAAAGCGCTTGAACAGC 550
|||.|||||.||.||.||||||||.||||||||||||||||||||.||..
RBAM_015150__ 501 CATTGAAGCCAATGTGGATAAAAAACTTTTGAAAAAAGCGCTTGAGCAAT 550
BSNT_02531___ 551 TTAATGAGAGAGAAAAGCAAATCATGGAGCTGCGGTTTGGGCTTGTCGGT 600
|.||.||.|||||||||||.||.|||||.|||||.||.|||||||||||.
RBAM_015150__ 551 TAAACGAAAGAGAAAAGCAGATTATGGAACTGCGTTTCGGGCTTGTCGGA 600
BSNT_02531___ 601 GAAGAAGAAAAAACCCAAAAGGATGTAGCGGATATGATGGGGATTTCTCA 650
||||||||||||||.|||||.||||||||.||.||||||||||||||.||
RBAM_015150__ 601 GAAGAAGAAAAAACACAAAAAGATGTAGCCGACATGATGGGGATTTCACA 650
BSNT_02531___ 651 GTCTTATATTTCGCGGCTTGAGAAAAGAATTATAAAAAGATTGAGAAAAG 700
.||||||||.||.|||||.||.||..|.|||||.||||||.|||||||||
RBAM_015150__ 651 ATCTTATATCTCCCGGCTCGAAAAGCGGATTATCAAAAGACTGAGAAAAG 700
BSNT_02531___ 701 AGTTCAACAAAATGGTGTAA 720
||||.|||||||||||||||
RBAM_015150__ 701 AGTTTAACAAAATGGTGTAA 720
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