Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02515 and RBAM_015080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:17
# Commandline: needle
# -asequence dna-align/BSNT_02515___murG.1.9828.seq
# -bsequence dna-align/RBAM_015080___murG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02515___murG-RBAM_015080___murG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02515___murG-RBAM_015080___murG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02515___murG
# 2: RBAM_015080___murG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1104
# Identity: 883/1104 (80.0%)
# Similarity: 883/1104 (80.0%)
# Gaps: 24/1104 ( 2.2%)
# Score: 3529.5
#
#
#=======================================
BSNT_02515___ 1 ATGCGAATTGCAATAAGCGGAGGCGGTACAGGGGGACATATTTATCCTGC 50
|||||.||||||.|||||||||||||.||.||.||||||||||||||.||
RBAM_015080__ 1 ATGCGTATTGCAGTAAGCGGAGGCGGAACCGGAGGACATATTTATCCGGC 50
BSNT_02515___ 51 GCTTGCTTTTATTAAAGAAGTGCAAAGACGTCATCCTAATGTGGAATTTT 100
.||.||.||||||||||||||.||..|.||.|||||..||||||||||||
RBAM_015080__ 51 CCTGGCCTTTATTAAAGAAGTTCAGCGCCGGCATCCGGATGTGGAATTTT 100
BSNT_02515___ 101 TATATATTGGAACAGAAAACGGGCTGGAGAAAAAAATTGTTGAGCGGGAG 150
|.|||||.||||||||.|||||.||.|||||||||||||||||.|||||.
RBAM_015080__ 101 TGTATATCGGAACAGAGAACGGTCTTGAGAAAAAAATTGTTGAACGGGAA 150
BSNT_02515___ 151 AATATACCGTTTCGTTCAATTGAAATTACAGGATTTAAAAGAAAATTGTC 200
|||||.|||||.||..|.||||||||||||||.||.|||.|||||.|.||
RBAM_015080__ 151 AATATTCCGTTCCGCGCCATTGAAATTACAGGTTTCAAACGAAAACTTTC 200
BSNT_02515___ 201 ATTTGAAAATGTCAAGACTGTGATGCGTTTTCTGAAGGGCGTCAAAAAGA 250
.|||||||||||.||.||.||.|||||.||..|.||.|||||.||.||.|
RBAM_015080__ 201 TTTTGAAAATGTAAAAACCGTCATGCGCTTCTTAAAAGGCGTGAAGAAAA 250
BSNT_02515___ 251 GTAAATCGTATTTAGCGGAATTTAAGCCCGATGCCGTAATTGGAACGGGC 300
|.|||||.||||||...||.|||||.||.||||||||.||.||.||.|||
RBAM_015080__ 251 GCAAATCATATTTAAAAGAGTTTAAACCAGATGCCGTTATCGGTACAGGC 300
BSNT_02515___ 301 GGTTATGTATGCGGGCCGGTTGTCTATGCCGCTGCGAAAATGGGAATTCC 350
||.|||||||||||.|||||.||.||.||.||.||.||||||||||||||
RBAM_015080__ 301 GGCTATGTATGCGGTCCGGTCGTATACGCGGCGGCAAAAATGGGAATTCC 350
BSNT_02515___ 351 GACTATTGTCCATGAACAAAACAGCCTGCCGGGCATCACGAATAAGTTTC 400
|||.||..|.|||||.||||||||||||||.||||||||.||||||||||
RBAM_015080__ 351 GACGATCATTCATGAGCAAAACAGCCTGCCCGGCATCACAAATAAGTTTC 400
BSNT_02515___ 401 TTTCAAAATATGTTAATAAAGTAGCGATTTGTTTTGAAGAAGCGAAATCA 450
|.||.||||||||||||||.|||||.|||||.||||||||.||.|||||.
RBAM_015080__ 401 TCTCGAAATATGTTAATAAGGTAGCAATTTGCTTTGAAGAGGCAAAATCG 450
BSNT_02515___ 451 CATTTTCCTAGC-GAGAAAGTTGTATTTACGGGAAACCCGCGAGCCTCTG 499
||||||||| || ||.||||||||.|||||||||||||||.|||||||||
RBAM_015080__ 451 CATTTTCCT-GCTGAAAAAGTTGTGTTTACGGGAAACCCGAGAGCCTCTG 499
BSNT_02515___ 500 AAGTCGTCTCAATAAAGACGGGACGATCAATGGCTGAATTTGGGCTTTCT 549
|||||||||||||.|||||.||.||.|||.|..||||.||.||| ||
RBAM_015080__ 500 AAGTCGTCTCAATTAAGACAGGCCGCTCATTAACTGAGTTCGGG----CT 545
BSNT_02515___ 550 GAAGAGA-----AAAAAACGGTCTTAATTTTCGGCGGAAGCCGAGGCGCT 594
||| ||| ||||||||||..|.|||||||||||||||.|||||||.
RBAM_015080__ 546 GAA-AGACAATCAAAAAACGGTGCTCATTTTCGGCGGAAGCAGAGGCGCG 594
BSNT_02515___ 595 GCACCGATTAACCGCGCTGTCATTGACATGCAGGATGCGCTGAAAACAAG 644
||.||.||||||||.||.||.||.||.||||||||.|...||||||| |
RBAM_015080__ 595 GCTCCCATTAACCGTGCCGTTATAGATATGCAGGAAGAATTGAAAAC--G 642
BSNT_02515___ 645 AGAC--TATCAAGTGCTGTATATCACCGGTGAAGTTCACTATGAAAAAGT 692
|||| ||.||||||||.|||||.|||||.|||||.||.||.||.||.||
RBAM_015080__ 643 AGACCTTACCAAGTGCTTTATATTACCGGGGAAGTACATTACGAGAAGGT 692
BSNT_02515___ 693 AATGAATGAGCTGAAAAGC----AAGGGTGCCGCTGATAATATGGTCACA 738
||.|..||||||||||.|| || |||||||||||||||||.|||
RBAM_015080__ 693 AACGGCTGAGCTGAAAGGCGGAAAA----GCCGCTGATAATATGGTGACA 738
BSNT_02515___ 739 AAGCCGTTTCTTCATCAAATGCCTGAGTATTTAAAGGCCATTGATGTCAT 788
||.||||||.|.||.||||||||.|||||.|||.|..|.|||||||||||
RBAM_015080__ 739 AAACCGTTTTTGCACCAAATGCCGGAGTACTTACAATCAATTGATGTCAT 788
BSNT_02515___ 789 TGTGGCCAGAGCCGGTGCGACAACGATTGCCGAAATTACTGCTCTCGGAA 838
|||||||||||||||.|||||.||||||||.||.||.||.||||||||.|
RBAM_015080__ 789 TGTGGCCAGAGCCGGAGCGACGACGATTGCGGAGATCACCGCTCTCGGCA 838
BSNT_02515___ 839 TCCCAAGTGTTCTGATCCCGAGTCCATATGTGACAGCGAATCACCAGGAG 888
|.||.||.||.||.||.|||||.||.|||||||||||.|||||||||||.
RBAM_015080__ 839 TTCCGAGCGTGCTTATTCCGAGCCCGTATGTGACAGCCAATCACCAGGAA 888
BSNT_02515___ 889 GTCAATGCGAGATCTCTCGGCCAGCATGATGCGGCGATTGTACTGAAAGA 938
||||||||||...|.|||.||||||||||.||.||.||.||||||||.||
RBAM_015080__ 889 GTCAATGCGAAGGCGCTCAGCCAGCATGACGCTGCAATCGTACTGAAGGA 938
BSNT_02515___ 939 AACAGAGCTCAGCGGGGAGAAGCTGATTGAAGCGCTAGACCGAATTGTAC 988
|||.|||||||||||.||.||.|||||.|..|||||.|||..|||.||..
RBAM_015080__ 939 AACCGAGCTCAGCGGAGAAAAACTGATCGCTGCGCTGGACAAAATCGTCA 988
BSNT_02515___ 989 TGAATGAGCAAACGTTAAAGGAAATGAGCGAACGAACAAAGTCACTCGGT 1038
|||||||..||||.|||||.||.|||||.||.||.|||||.|||||||||
RBAM_015080__ 989 TGAATGAAGAAACCTTAAAAGACATGAGTGAGCGGACAAAATCACTCGGT 1038
BSNT_02515___ 1039 GTTCCTGACGCGGCTGCCCGTTTATACAGCGTACTCGAGGAATTAAAAAA 1088
|||||.||.|||||.|||.|..|.|||||..|..|.||.||..|||||||
RBAM_015080__ 1039 GTTCCGGATGCGGCAGCCAGACTGTACAGTATCATGGAAGACATAAAAAA 1088
BSNT_02515___ 1089 ATAG 1092
||||
RBAM_015080__ 1089 ATAG 1092
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