Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02514 and RBAM_015070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:17
# Commandline: needle
# -asequence dna-align/BSNT_02514___spoVE.1.9828.seq
# -bsequence dna-align/RBAM_015070___spoVE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02514___spoVE-RBAM_015070___spoVE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02514___spoVE-RBAM_015070___spoVE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02514___spoVE
# 2: RBAM_015070___spoVE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1114
# Identity: 912/1114 (81.9%)
# Similarity: 912/1114 (81.9%)
# Gaps: 14/1114 ( 1.3%)
# Score: 3788.0
#
#
#=======================================
BSNT_02514___ 1 GTGTCGATTGCTTTGACTACTAAAAAAACATCGCCTGATTTGTTATTGGT 50
||||||||||||||||||.||||||||||||||||.||
RBAM_015070__ 1 ------------TTGACTACTAAAAAAACAGCGCCTGATTTGTTATTAGT 38
BSNT_02514___ 51 CATCATTACGTTATTATTATTAACAATCGGATTAATTATGGTGTACAGTG 100
.||||||||||||||..|.||||||||.||||||||||||||.|||||||
RBAM_015070__ 39 TATCATTACGTTATTGCTTTTAACAATAGGATTAATTATGGTCTACAGTG 88
BSNT_02514___ 101 CGAGTGCGGTATGGGCGGATTATAAATTTGACGACTCATTCTTTTTCGCG 150
|.|||||||||||||||||||||||||||||||||||.||.||.||||||
RBAM_015070__ 89 CAAGTGCGGTATGGGCGGATTATAAATTTGACGACTCGTTTTTCTTCGCG 138
BSNT_02514___ 151 AAACGGCAGCTTTTGTTTGCGGGAATCGGCGTCATTGCTATGTTTTTTAT 200
|||||||||||..||||||||||.||||||||||||||.||||||||.||
RBAM_015070__ 139 AAACGGCAGCTGCTGTTTGCGGGGATCGGCGTCATTGCCATGTTTTTCAT 188
BSNT_02514___ 201 CATGAATGTCGATTATTGGACTTGGAGGACATGGTCCAAATTGCTGATGG 250
.||||||||.|||||||||||.|||.|.||||||||.||..||||..||.
RBAM_015070__ 189 TATGAATGTGGATTATTGGACATGGCGTACATGGTCGAAGCTGCTTCTGA 238
BSNT_02514___ 251 TTATCTGCTTTTTCCTTCTGGTGCTTGTTTTGATACCGGGCGTCGGAATG 300
|.||.||.|||||.||.||.||||||||..||||.|||||.|||||||||
RBAM_015070__ 239 TCATTTGTTTTTTTCTGCTTGTGCTTGTGCTGATTCCGGGAGTCGGAATG 288
BSNT_02514___ 301 GTGCGGAACGGTTCAAGAAGCTGGATCGGAGTCGGAGCATTCAGCATACA 350
||||||||||||||||||||||||||||||||.|||||.||||||||.||
RBAM_015070__ 289 GTGCGGAACGGTTCAAGAAGCTGGATCGGAGTGGGAGCGTTCAGCATTCA 338
BSNT_02514___ 351 GCCTTCAGAGTTTATGAAGCTTGCGATGATTGCATTCCTTGCTAAATTTC 400
||||||.|||||||||||.||.|||||||||||.||.||.||||||||||
RBAM_015070__ 339 GCCTTCGGAGTTTATGAAACTCGCGATGATTGCGTTTCTGGCTAAATTTC 388
BSNT_02514___ 401 TCTCTGAAAAACAAAAAAACATCACATCGTTCAGACGGGGGTTCGTCCCT 450
|.|||||||||||.||.||.||.||.||.||||||||.||.|||||.||.
RBAM_015070__ 389 TTTCTGAAAAACAGAAGAATATTACGTCATTCAGACGCGGATTCGTTCCC 438
BSNT_02514___ 451 GCACTTGGCATCGTGTTTTCAGCATTTTTGATTATCATGTGCCAGCCTGA 500
||.||.||.|||||||||||.||||||.|.|||||.|||||||||||.||
RBAM_015070__ 439 GCGCTCGGAATCGTGTTTTCTGCATTTATTATTATTATGTGCCAGCCAGA 488
BSNT_02514___ 501 CCTCGGAACGGGGACAGTAATGGTCGGAACTTGTATTGTCATGATTTTTG 550
|||.|||||||||||.||||||||.||.||.||.||.||.||||||||||
RBAM_015070__ 489 CCTGGGAACGGGGACGGTAATGGTGGGCACGTGCATCGTGATGATTTTTG 538
BSNT_02514___ 551 TAGCCGGCGCGCGGATCGCCCATTTCGTCTTTCTCGGACTGATCGGCCTC 600
|..||||.|||||.|||||.|||||.|..||.||||||||.|||||..|.
RBAM_015070__ 539 TTTCCGGTGCGCGAATCGCTCATTTTGCGTTCCTCGGACTCATCGGTTTA 588
BSNT_02514___ 601 AGCGGATTTGTCGG-GCTCGTACTATCAGCTCCATATCGGATTAAGCGGA 649
|||||||||| ||| |||.||.||.||.|||||.|||||||||||.||||
RBAM_015070__ 589 AGCGGATTTG-CGGCGCTAGTTCTGTCCGCTCCTTATCGGATTAAACGGA 637
BSNT_02514___ 650 TTACCTCATACTTAAATCCATGGGAAGACCCGCTCGGAAGCGGATTTCAG 699
|||||||.||||||||.||.|||||.||.|||||.|||||||||||||||
RBAM_015070__ 638 TTACCTCTTACTTAAACCCGTGGGAGGATCCGCTTGGAAGCGGATTTCAG 687
BSNT_02514___ 700 ATCATTCAATCGCTTTATGCAGTGGGGCCCGGCGGGTTGTTTGGAATGGG 749
||||||||.|||||.|||||.||.||.||.|||||..||||.||.|||||
RBAM_015070__ 688 ATCATTCAGTCGCTCTATGCCGTAGGTCCGGGCGGTCTGTTCGGGATGGG 737
BSNT_02514___ 750 GCTCGGACAAAGCAGACAGAAATTCTTTTATCTGCCTGAGCCGCAAACAG 799
||||||.||||||.|.||.||.||.|||||.|||||.|||||||||||.|
RBAM_015070__ 738 GCTCGGCCAAAGCCGGCAAAAGTTTTTTTACCTGCCGGAGCCGCAAACCG 787
BSNT_02514___ 800 ACTTTATTTTCGCCATCTTGTCAGAGGAGCTGGGCTTTATCGGGGGAACA 849
|.||.|||||.||.||.||.||.|||||.||.|||||||||||.||..|.
RBAM_015070__ 788 ATTTCATTTTTGCTATTTTATCTGAGGAACTCGGCTTTATCGGCGGTTCG 837
BSNT_02514___ 850 CTTATTTTGCTCCTCTTCAGCGTCCTGCTGTGGAGAGGAATCAGAATTGC 899
||.||.|||||.||.|||||..|..|..|.|||.|.||..||||.|||||
RBAM_015070__ 838 CTCATATTGCTGCTGTTCAGTATTTTATTATGGCGGGGCGTCAGGATTGC 887
BSNT_02514___ 900 GCTTGGTGCCCCTGATCTGTACGGAAGCTTTGTCGCAGTCGGTATTATTT 949
.||.||.||.||.|||.|.|||||||||||||||||..||||||||||||
RBAM_015070__ 888 CCTCGGCGCGCCGGATTTATACGGAAGCTTTGTCGCCATCGGTATTATTT 937
BSNT_02514___ 950 CAATGATTGCCATTCAAGTCATGATCAATATCGGCGTAGTCACGGGCCTG 999
|.|||||.||.||||||||||||||.|||||||||||.||.|||||.|||
RBAM_015070__ 938 CTATGATAGCTATTCAAGTCATGATTAATATCGGCGTTGTGACGGGGCTG 987
BSNT_02514___ 1000 ATTCCTGTAACAGGCATCACGCTCCCGTTTCTGAGCTACGGAGGCTCTTC 1049
||.||.||||||||.||.|||||.||||||.|.||||||||||||||.||
RBAM_015070__ 988 ATCCCGGTAACAGGAATTACGCTGCCGTTTTTAAGCTACGGAGGCTCATC 1037
BSNT_02514___ 1050 ATTGACTCTAATGCTGATGGCAGTTGGTGTGCTGCTGAATGTAAGCCGCT 1099
|.||||.||.|||||....||.||.||.|||||..|.|||||.||.||.|
RBAM_015070__ 1038 ACTGACGCTGATGCTCGCAGCGGTCGGCGTGCTTTTAAATGTCAGTCGGT 1087
BSNT_02514___ 1100 ACTCGAGGTATTAA 1113
||||||||||||.|
RBAM_015070__ 1088 ACTCGAGGTATTGA 1101
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