Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02514 and RBAM_015070

See Amino acid alignment / Visit BSNT_02514 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:17
# Commandline: needle
#    -asequence dna-align/BSNT_02514___spoVE.1.9828.seq
#    -bsequence dna-align/RBAM_015070___spoVE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02514___spoVE-RBAM_015070___spoVE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02514___spoVE-RBAM_015070___spoVE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02514___spoVE
# 2: RBAM_015070___spoVE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1114
# Identity:     912/1114 (81.9%)
# Similarity:   912/1114 (81.9%)
# Gaps:          14/1114 ( 1.3%)
# Score: 3788.0
# 
#
#=======================================

BSNT_02514___      1 GTGTCGATTGCTTTGACTACTAAAAAAACATCGCCTGATTTGTTATTGGT     50
                                 ||||||||||||||||||.||||||||||||||||.||
RBAM_015070__      1 ------------TTGACTACTAAAAAAACAGCGCCTGATTTGTTATTAGT     38

BSNT_02514___     51 CATCATTACGTTATTATTATTAACAATCGGATTAATTATGGTGTACAGTG    100
                     .||||||||||||||..|.||||||||.||||||||||||||.|||||||
RBAM_015070__     39 TATCATTACGTTATTGCTTTTAACAATAGGATTAATTATGGTCTACAGTG     88

BSNT_02514___    101 CGAGTGCGGTATGGGCGGATTATAAATTTGACGACTCATTCTTTTTCGCG    150
                     |.|||||||||||||||||||||||||||||||||||.||.||.||||||
RBAM_015070__     89 CAAGTGCGGTATGGGCGGATTATAAATTTGACGACTCGTTTTTCTTCGCG    138

BSNT_02514___    151 AAACGGCAGCTTTTGTTTGCGGGAATCGGCGTCATTGCTATGTTTTTTAT    200
                     |||||||||||..||||||||||.||||||||||||||.||||||||.||
RBAM_015070__    139 AAACGGCAGCTGCTGTTTGCGGGGATCGGCGTCATTGCCATGTTTTTCAT    188

BSNT_02514___    201 CATGAATGTCGATTATTGGACTTGGAGGACATGGTCCAAATTGCTGATGG    250
                     .||||||||.|||||||||||.|||.|.||||||||.||..||||..||.
RBAM_015070__    189 TATGAATGTGGATTATTGGACATGGCGTACATGGTCGAAGCTGCTTCTGA    238

BSNT_02514___    251 TTATCTGCTTTTTCCTTCTGGTGCTTGTTTTGATACCGGGCGTCGGAATG    300
                     |.||.||.|||||.||.||.||||||||..||||.|||||.|||||||||
RBAM_015070__    239 TCATTTGTTTTTTTCTGCTTGTGCTTGTGCTGATTCCGGGAGTCGGAATG    288

BSNT_02514___    301 GTGCGGAACGGTTCAAGAAGCTGGATCGGAGTCGGAGCATTCAGCATACA    350
                     ||||||||||||||||||||||||||||||||.|||||.||||||||.||
RBAM_015070__    289 GTGCGGAACGGTTCAAGAAGCTGGATCGGAGTGGGAGCGTTCAGCATTCA    338

BSNT_02514___    351 GCCTTCAGAGTTTATGAAGCTTGCGATGATTGCATTCCTTGCTAAATTTC    400
                     ||||||.|||||||||||.||.|||||||||||.||.||.||||||||||
RBAM_015070__    339 GCCTTCGGAGTTTATGAAACTCGCGATGATTGCGTTTCTGGCTAAATTTC    388

BSNT_02514___    401 TCTCTGAAAAACAAAAAAACATCACATCGTTCAGACGGGGGTTCGTCCCT    450
                     |.|||||||||||.||.||.||.||.||.||||||||.||.|||||.||.
RBAM_015070__    389 TTTCTGAAAAACAGAAGAATATTACGTCATTCAGACGCGGATTCGTTCCC    438

BSNT_02514___    451 GCACTTGGCATCGTGTTTTCAGCATTTTTGATTATCATGTGCCAGCCTGA    500
                     ||.||.||.|||||||||||.||||||.|.|||||.|||||||||||.||
RBAM_015070__    439 GCGCTCGGAATCGTGTTTTCTGCATTTATTATTATTATGTGCCAGCCAGA    488

BSNT_02514___    501 CCTCGGAACGGGGACAGTAATGGTCGGAACTTGTATTGTCATGATTTTTG    550
                     |||.|||||||||||.||||||||.||.||.||.||.||.||||||||||
RBAM_015070__    489 CCTGGGAACGGGGACGGTAATGGTGGGCACGTGCATCGTGATGATTTTTG    538

BSNT_02514___    551 TAGCCGGCGCGCGGATCGCCCATTTCGTCTTTCTCGGACTGATCGGCCTC    600
                     |..||||.|||||.|||||.|||||.|..||.||||||||.|||||..|.
RBAM_015070__    539 TTTCCGGTGCGCGAATCGCTCATTTTGCGTTCCTCGGACTCATCGGTTTA    588

BSNT_02514___    601 AGCGGATTTGTCGG-GCTCGTACTATCAGCTCCATATCGGATTAAGCGGA    649
                     |||||||||| ||| |||.||.||.||.|||||.|||||||||||.||||
RBAM_015070__    589 AGCGGATTTG-CGGCGCTAGTTCTGTCCGCTCCTTATCGGATTAAACGGA    637

BSNT_02514___    650 TTACCTCATACTTAAATCCATGGGAAGACCCGCTCGGAAGCGGATTTCAG    699
                     |||||||.||||||||.||.|||||.||.|||||.|||||||||||||||
RBAM_015070__    638 TTACCTCTTACTTAAACCCGTGGGAGGATCCGCTTGGAAGCGGATTTCAG    687

BSNT_02514___    700 ATCATTCAATCGCTTTATGCAGTGGGGCCCGGCGGGTTGTTTGGAATGGG    749
                     ||||||||.|||||.|||||.||.||.||.|||||..||||.||.|||||
RBAM_015070__    688 ATCATTCAGTCGCTCTATGCCGTAGGTCCGGGCGGTCTGTTCGGGATGGG    737

BSNT_02514___    750 GCTCGGACAAAGCAGACAGAAATTCTTTTATCTGCCTGAGCCGCAAACAG    799
                     ||||||.||||||.|.||.||.||.|||||.|||||.|||||||||||.|
RBAM_015070__    738 GCTCGGCCAAAGCCGGCAAAAGTTTTTTTACCTGCCGGAGCCGCAAACCG    787

BSNT_02514___    800 ACTTTATTTTCGCCATCTTGTCAGAGGAGCTGGGCTTTATCGGGGGAACA    849
                     |.||.|||||.||.||.||.||.|||||.||.|||||||||||.||..|.
RBAM_015070__    788 ATTTCATTTTTGCTATTTTATCTGAGGAACTCGGCTTTATCGGCGGTTCG    837

BSNT_02514___    850 CTTATTTTGCTCCTCTTCAGCGTCCTGCTGTGGAGAGGAATCAGAATTGC    899
                     ||.||.|||||.||.|||||..|..|..|.|||.|.||..||||.|||||
RBAM_015070__    838 CTCATATTGCTGCTGTTCAGTATTTTATTATGGCGGGGCGTCAGGATTGC    887

BSNT_02514___    900 GCTTGGTGCCCCTGATCTGTACGGAAGCTTTGTCGCAGTCGGTATTATTT    949
                     .||.||.||.||.|||.|.|||||||||||||||||..||||||||||||
RBAM_015070__    888 CCTCGGCGCGCCGGATTTATACGGAAGCTTTGTCGCCATCGGTATTATTT    937

BSNT_02514___    950 CAATGATTGCCATTCAAGTCATGATCAATATCGGCGTAGTCACGGGCCTG    999
                     |.|||||.||.||||||||||||||.|||||||||||.||.|||||.|||
RBAM_015070__    938 CTATGATAGCTATTCAAGTCATGATTAATATCGGCGTTGTGACGGGGCTG    987

BSNT_02514___   1000 ATTCCTGTAACAGGCATCACGCTCCCGTTTCTGAGCTACGGAGGCTCTTC   1049
                     ||.||.||||||||.||.|||||.||||||.|.||||||||||||||.||
RBAM_015070__    988 ATCCCGGTAACAGGAATTACGCTGCCGTTTTTAAGCTACGGAGGCTCATC   1037

BSNT_02514___   1050 ATTGACTCTAATGCTGATGGCAGTTGGTGTGCTGCTGAATGTAAGCCGCT   1099
                     |.||||.||.|||||....||.||.||.|||||..|.|||||.||.||.|
RBAM_015070__   1038 ACTGACGCTGATGCTCGCAGCGGTCGGCGTGCTTTTAAATGTCAGTCGGT   1087

BSNT_02514___   1100 ACTCGAGGTATTAA   1113
                     ||||||||||||.|
RBAM_015070__   1088 ACTCGAGGTATTGA   1101


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