Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02512 and RBAM_015050
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:17
# Commandline: needle
# -asequence dna-align/BSNT_02512___mraY.1.9828.seq
# -bsequence dna-align/RBAM_015050___mraY.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02512___mraY-RBAM_015050___mraY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02512___mraY-RBAM_015050___mraY.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02512___mraY
# 2: RBAM_015050___mraY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 975
# Identity: 792/975 (81.2%)
# Similarity: 792/975 (81.2%)
# Gaps: 0/975 ( 0.0%)
# Score: 3228.0
#
#
#=======================================
BSNT_02512___ 1 ATGCTTGAGCAAGTCATTCTGTTTACAATTTTAATGGGGTTTTTAATTAG 50
||||||||||||||.|||.|.||||||||..|||||||.||||||||.||
RBAM_015050__ 1 ATGCTTGAGCAAGTGATTTTATTTACAATAATAATGGGATTTTTAATCAG 50
BSNT_02512___ 51 TGTTCTGCTCTCTCCGATTCTTATTCCGTTTTTAAGAAGATTAAAATTCG 100
|||||||.|.||||||||||||||.||||||||||||.|.||||||||||
RBAM_015050__ 51 TGTTCTGATATCTCCGATTCTTATCCCGTTTTTAAGACGTTTAAAATTCG 100
BSNT_02512___ 101 GCCAGAGTATTAGAGAAGAAGGACCGAAATCACATCAGAAAAAATCAGGG 150
||||.|||||.||.|||||.||.||||||||||||..|||||||||||||
RBAM_015050__ 101 GCCAAAGTATCAGGGAAGAGGGGCCGAAATCACATATGAAAAAATCAGGG 150
BSNT_02512___ 151 ACACCGACAATGGGCGGGGTCATGATCATACTTTCTATCATAGTGACAAC 200
||.|||||.|||||||||||||||||.||..|.||.|||....|.||..|
RBAM_015050__ 151 ACGCCGACGATGGGCGGGGTCATGATTATCGTATCCATCGCCATTACGGC 200
BSNT_02512___ 201 AATTGTTATGACACAGAAGTTTTCAGAAATAAGCCCCGAAATGGTGCTGC 250
.|||||.|||||.|||||.|||||..|..|.|||.|.||||||.|.||.|
RBAM_015050__ 201 GATTGTCATGACGCAGAAATTTTCGCATCTGAGCGCGGAAATGTTTCTTC 250
BSNT_02512___ 251 TTCTGTTTGTTACGCTAGGCTACGGTTTGCTTGGCTTTTTAGATGATTAC 300
|.||||||||.|||.|.||.|||||..||||.||||||.|.|||||.||.
RBAM_015050__ 251 TGCTGTTTGTCACGATCGGATACGGCCTGCTCGGCTTTCTGGATGACTAT 300
BSNT_02512___ 301 ATCAAGGTTGTCATGAAGCGCAATCTTGGATTGACATCAAAGCAAAAGCT 350
||.||.||.||.|||||.||.|||||.||||||||.||.|||||.||..|
RBAM_015050__ 301 ATTAAAGTAGTAATGAAACGGAATCTCGGATTGACGTCGAAGCAGAAATT 350
BSNT_02512___ 351 GATCGGACAAATTATTATTGCAGTTGTATTTTACGCCGTGTATCATTACT 400
||||||.||.||.||||||||..||||||||||||..||.||||||||.|
RBAM_015050__ 351 GATCGGCCAGATCATTATTGCCATTGTATTTTACGGAGTATATCATTATT 400
BSNT_02512___ 401 ACAATTTTGCGACGGATATTCGCATTCCTGGAACTGACTTATCATTTGAT 450
.|.|||||.|.||.|..||..|..|.||.||.||..|..|.|||.|.|||
RBAM_015050__ 401 GCCATTTTTCAACCGGCATCAGGGTGCCGGGCACACATCTGTCAATCGAT 450
BSNT_02512___ 451 CTTGGCTGGGCTTACTTTATCCTTGTGCTCTTTATGCTTGTCGGCGGATC 500
||.|||||||..|||||||||||.||.|||||||||||||||||.||.||
RBAM_015050__ 451 CTCGGCTGGGGATACTTTATCCTCGTTCTCTTTATGCTTGTCGGAGGTTC 500
BSNT_02512___ 501 AAACGCAGTTAACCTGACTGACGGCCTTGACGGGTTATTATCCGGTACTG 550
|||.||.||.||||||||.|||||.||.|||||..|.||.||||||||.|
RBAM_015050__ 501 AAATGCCGTCAACCTGACAGACGGTCTGGACGGTCTCTTGTCCGGTACCG 550
BSNT_02512___ 551 CGGCGATTGCCTTTGGCGCCTTTGCCATTCTGGCATGGAATCAGTCTCAA 600
||||.||.||.||.|||||.||.|||||.||.||.|||||.|||||.|||
RBAM_015050__ 551 CGGCTATCGCATTCGGCGCTTTCGCCATCCTTGCGTGGAACCAGTCACAA 600
BSNT_02512___ 601 TATGACGTAGCGATTTTCTCAGTTGCCGTTGTCGGTGCAGTTCTGGGCTT 650
||||||||.|||||||||||.||||||||||||||.||.|||||.||.||
RBAM_015050__ 601 TATGACGTTGCGATTTTCTCGGTTGCCGTTGTCGGCGCCGTTCTCGGTTT 650
BSNT_02512___ 651 CCTTGTATTTAATGCTCATCCGGCCAAAGTTTTTATGGGAGATACGGGAT 700
.||||||||.||.||.|||||.|||||.||.||||||||.|||||.||.|
RBAM_015050__ 651 TCTTGTATTCAACGCCCATCCCGCCAAGGTATTTATGGGGGATACCGGTT 700
BSNT_02512___ 701 CGCTTGCATTGGGAGGAGCCATCGTTACCATTGCCATTTTAACGAAATTA 750
|||||||..|.||||||||.|||||.|||.||||||||||.|||||..|.
RBAM_015050__ 701 CGCTTGCGCTCGGAGGAGCGATCGTGACCGTTGCCATTTTGACGAAGCTT 750
BSNT_02512___ 751 GAGATCCTGCTGGTTATCATCGGCGGTGTATTCGTTATCGAGACATTATC 800
||.||.|||||.||.||.||||||||.|||||.|||||.|||||.|||||
RBAM_015050__ 751 GAAATTCTGCTCGTCATTATCGGCGGAGTATTTGTTATTGAGACCTTATC 800
BSNT_02512___ 801 TGTTATTTTGCAGGTCATCAGCTTTAAAACGACAGGTAAACGAATCTTTA 850
||||||.||.||.|||||||||||||||||||||||.|||||||||||||
RBAM_015050__ 801 TGTTATCTTACAAGTCATCAGCTTTAAAACGACAGGAAAACGAATCTTTA 850
BSNT_02512___ 851 AAATGAGTCCGCTTCATCACCATTATGAGCTTGTCGGCTGGTCTGAATGG 900
|.||||||||||||||.||||||||.||..|.|||||.||||||||||||
RBAM_015050__ 851 AGATGAGTCCGCTTCACCACCATTACGAATTGGTCGGATGGTCTGAATGG 900
BSNT_02512___ 901 AGAGTAGTCGTGACGTTTTGGGCTGCGGGACTTTTGCTTGCCGTTTTAGG 950
|||||.|||||.||.||.|||.||||||||||..||||||||||||||||
RBAM_015050__ 901 AGAGTTGTCGTCACATTCTGGACTGCGGGACTGCTGCTTGCCGTTTTAGG 950
BSNT_02512___ 951 AATTTACATCGAGGTGTGGTTATAA 975
|||||||||||||||||||||||||
RBAM_015050__ 951 AATTTACATCGAGGTGTGGTTATAA 975
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