Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02510 and RBAM_015040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:17
# Commandline: needle
# -asequence dna-align/BSNT_02510___murE.1.9828.seq
# -bsequence dna-align/RBAM_015040___murE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02510___murE-RBAM_015040___murE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02510___murE-RBAM_015040___murE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02510___murE
# 2: RBAM_015040___murE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1490
# Identity: 1182/1490 (79.3%)
# Similarity: 1182/1490 (79.3%)
# Gaps: 22/1490 ( 1.5%)
# Score: 4695.0
#
#
#=======================================
BSNT_02510___ 1 ATGAAACTTACAAAGCTGCTTACATACTTAACAACCGAACCTTCTGTAAA 50
||||||||||||||||||||||||||.||||...||||||||..|..|||
RBAM_015040__ 1 ATGAAACTTACAAAGCTGCTTACATATTTAATGGCCGAACCTGTTCAAAA 50
BSNT_02510___ 51 CGACTCACAAGACCCTGAAATAACTTCAATTGAGATGGACTCCAGGGAAG 100
.||||..||.||||||||.|||||||||||||||||||||||||||||||
RBAM_015040__ 51 TGACTTTCATGACCCTGACATAACTTCAATTGAGATGGACTCCAGGGAAG 100
BSNT_02510___ 101 TAAAGAAAGGGAGTCTTTTTGTATGTGTAAAAGGGTATACGGTGGATGGC 150
|.|..|||||||||||||||||.|||.||||||||||||||||.||.||.
RBAM_015040__ 101 TGAGAAAAGGGAGTCTTTTTGTGTGTATAAAAGGGTATACGGTAGACGGA 150
BSNT_02510___ 151 CACGATTTTGCGCAAAAAGCAGTAGAAAACGGTGCAGCGGCTATTGTGGC 200
||.||||||||.||||||||.|.|||||||||.||||||||.||.||.||
RBAM_015040__ 151 CATGATTTTGCCCAAAAAGCCGCAGAAAACGGCGCAGCGGCCATCGTTGC 200
BSNT_02510___ 201 AGAAAGAGAGGTCGATGTGAATGTTCCTGTTATTATTGTCCGGCAGTCAC 250
.||.|.||||.|.||.||..||||||||||.|||||||||||.|.|||||
RBAM_015040__ 201 CGAGAAAGAGCTTGACGTCGATGTTCCTGTCATTATTGTCCGCCGGTCAC 250
BSNT_02510___ 251 TTCGCGCGCTCAGCGTTTTGTCTGATGCGTTTTACGGACAGCCGACGAAG 300
..||.||||||||||||.|.|||||.|||||||||||.||||||||.|||
RBAM_015040__ 251 AGCGGGCGCTCAGCGTTCTTTCTGACGCGTTTTACGGGCAGCCGACAAAG 300
BSNT_02510___ 301 AAGCTTCAGCTGATTGGGATAACAGGGACAAACGGCAAAACATCAACGAC 350
.||||||||||.||.||.||.||.||.|||||||||||||||||||||||
RBAM_015040__ 301 CAGCTTCAGCTTATCGGCATCACCGGCACAAACGGCAAAACATCAACGAC 350
BSNT_02510___ 351 CCACATGGTCGATGAGATTCTGAAAAAAGCGGGAAAACGCACAGGCTTGA 400
.||||||||.|||||||||.|.|||||||||||||.||..||.||.||.|
RBAM_015040__ 351 GCACATGGTTGATGAGATTTTCAAAAAAGCGGGAAGACAGACCGGTTTAA 400
BSNT_02510___ 401 TCGGTACAATGTACATGAAAATCGGAGACGAAACACTTCCTGTTAAAAAC 450
||||.||.||||||||.||||||||.||.||.|||.|.||.||.|||||.
RBAM_015040__ 401 TCGGAACGATGTACATTAAAATCGGGGATGAGACATTCCCGGTCAAAAAT 450
BSNT_02510___ 451 ACGACTCCGGAAAGCGTCACGCTGCAGAAAACGTTTAAGAAAATGAATGA 500
||.||.||.|||||||||||.|||||.||||||||.||||||||||||||
RBAM_015040__ 451 ACAACGCCCGAAAGCGTCACACTGCAAAAAACGTTCAAGAAAATGAATGA 500
BSNT_02510___ 501 CAAGCATGTTGACACTGCAATCATGGAGGTTTCTTCCCACGCTTTGTCTT 550
..|||||||||||||.||.||.|||||.||.|||||.||||||.||||..
RBAM_015040__ 501 TGAGCATGTTGACACAGCTATTATGGAAGTGTCTTCTCACGCTCTGTCAC 550
BSNT_02510___ 551 TAGGACGCGTCCATGGCTGTGATTATGATATTGCCGTGTTTACGAATTTA 600
|.||..|.||.||.|||||.|||||||||||.|||||.||.|||||..|.
RBAM_015040__ 551 TCGGCAGGGTTCACGGCTGCGATTATGATATCGCCGTATTCACGAACCTG 600
BSNT_02510___ 601 ACACAGGACCATCTGGACTATCATAAAACGATGGATGAGTACCGGCATGC 650
||.|||||||||.|.||.|||||.||.||||||||.||.|||.|.||.||
RBAM_015040__ 601 ACGCAGGACCATTTAGATTATCACAAGACGATGGAAGACTACAGACAGGC 650
BSNT_02510___ 651 AAAAAGCTTGCTCTTTTCCCAACTTGGCGGGGCTTTCAACCATGAACATC 700
.||||||.|.||.||||||||.||.|||||..|.||.||.||.|||.|.|
RBAM_015040__ 651 TAAAAGCCTCCTGTTTTCCCAGCTGGGCGGCTCCTTTAATCACGAAAAGC 700
BSNT_02510___ 701 CAAAGCGTGCCGTCCTGAATGCTGACGATGAGGCGAGCGCTTATTTTGAA 750
|.|||||.|||||..|.||.||.||.||..|.||.||.||||||||||||
RBAM_015040__ 701 CGAAGCGGGCCGTTTTAAACGCAGATGACAAAGCCAGTGCTTATTTTGAA 750
BSNT_02510___ 751 AAGGTAACAGCTGCGCATATCTCTACATACGGAATTAAAAACGATGCTGA 800
||.||.||.||.|||||.|||..||||||||||||..|.||.|||||.||
RBAM_015040__ 751 AAAGTGACGGCGGCGCACATCCTTACATACGGAATCGAGAATGATGCCGA 800
BSNT_02510___ 801 TGTGATGGCGAAGAACATC-AGTATCACTGCACAGGGCACAAGCTTTGAT 849
|||.||||||||..|.||| || |||.||||.||.||||||||||||||.
RBAM_015040__ 801 TGTCATGGCGAAACAAATCGAG-ATCTCTGCGCAAGGCACAAGCTTTGAA 849
BSNT_02510___ 850 CTCGTGACAAACAAAGGCACGAAGCACATCACGATGTCTCTCGTCGGACA 899
||.||.||....|||||.||.|||||.|||||..|.||.||||||||.|.
RBAM_015040__ 850 CTTGTTACGCCAAAAGGAACAAAGCAGATCACAGTTTCACTCGTCGGCCG 899
BSNT_02510___ 900 ATTTAATGTGTATAACGTGCTGGCCGCTGTTGCGACATGTATTGCAGCAG 949
.||.||.|||||||||||.|||||.||.|..||||||.|.||.|||||.|
RBAM_015040__ 900 CTTCAACGTGTATAACGTACTGGCTGCAGCGGCGACAGGGATCGCAGCGG 949
BSNT_02510___ 950 GCATACCGTTTGAAATCATCACTGAG-GCTGTTGAAGAATTGCATGGTGT 998
|..|.||||||||.|..||||| .|| |||.|||||||..||||.|||||
RBAM_015040__ 950 GTCTGCCGTTTGATACGATCAC-AAGCGCTCTTGAAGAGCTGCAAGGTGT 998
BSNT_02510___ 999 AAGAGGCCGTTTTGAATTGGTCAATCAGCAGCAGGAGTTTCCTGTCATTG 1048
.||||||||.||||||.||||.|||||..|.|||..|||||||||..|||
RBAM_015040__ 999 CAGAGGCCGGTTTGAACTGGTGAATCATAATCAGCCGTTTCCTGTGGTTG 1048
BSNT_02510___ 1049 TAGACTACGCGCACACACCGGACAGCCTTGAAAATGTGCTGGAGACATGC 1098
|.||.|||||||||||.||.|||||.||.|||||.||.|||.|.||||||
RBAM_015040__ 1049 TCGATTACGCGCACACGCCTGACAGTCTGGAAAACGTCCTGAATACATGC 1098
BSNT_02510___ 1099 AGAGACATGACGGAAGGAAAGCTATTTGTCGTTGTCGGCTGCGGAGGAGA 1148
|.|||||||||.||.||.|||||.||.|||||.|||||||||||.||.||
RBAM_015040__ 1099 AAAGACATGACAGAGGGCAAGCTTTTCGTCGTCGTCGGCTGCGGCGGTGA 1148
BSNT_02510___ 1149 CAGAGATAAGACGAAGCGCCCGAAAATGGCTAAAATTGCTGTGGAGCTGG 1198
|.|.||.||.|||||.||||||||||||||..|||||||.|||..|.|.|
RBAM_015040__ 1149 CCGGGACAAAACGAAACGCCCGAAAATGGCGGAAATTGCGGTGCGGATTG 1198
BSNT_02510___ 1199 CTGACGAGCCGATTTTCACGTCAGATAACCCGAGAAGCGAAGATCCTCGC 1248
|.|||||.|||||||||||.||||||||||||||||||||.||.||.|..
RBAM_015040__ 1199 CCGACGAACCGATTTTCACTTCAGATAACCCGAGAAGCGAGGACCCGCTG 1248
BSNT_02510___ 1249 GCGATTTTAAGAGATATGGAAGCCGGAGTAGAGAACGCA--TACTATCAC 1296
||.||.|||||||||||||||...||.|| ||||.||| |||||||||
RBAM_015040__ 1249 GCCATATTAAGAGATATGGAAAGAGGGGT--AGAAGGCACTTACTATCAC 1296
BSNT_02510___ 1297 AGTATTGCAAACCGCGAGCAGGCGATCTTTTTCGCAATTGCCAATGCCAA 1346
|||||.|||||.|||||||||||.||||||||.||.||||||||.||.||
RBAM_015040__ 1297 AGTATCGCAAATCGCGAGCAGGCTATCTTTTTTGCCATTGCCAACGCGAA 1346
BSNT_02510___ 1347 AAAAGGCGACGTTGTCCTCATTGCCGGAAAAGGACATGAAACCTATCAGC 1396
|||.||.||.||.||.||.||||||||.|||||.||||||||||||||||
RBAM_015040__ 1347 AAAGGGAGATGTGGTTCTGATTGCCGGGAAAGGGCATGAAACCTATCAGC 1396
BSNT_02510___ 1397 AGATCGGAAATGAAACTTTCGATTTTGATGATGCTGAAGTAGCGGCGAGA 1446
|.|||||.||||||||.|||||.||||||||.||.||||||||||..|||
RBAM_015040__ 1397 AAATCGGCAATGAAACATTCGACTTTGATGACGCCGAAGTAGCGGGAAGA 1446
BSNT_02510___ 1447 GCCATTGTTGAACTCAATAAGAA-TAAGACGAATTCATAG 1485
||.||||||||.||.|||||.|| |||
RBAM_015040__ 1447 GCTATTGTTGAGCTGAATAAAAAGTAA------------- 1473
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