Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02503 and RBAM_014980
See
Amino acid alignment /
Visit
BSNT_02503 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence dna-align/BSNT_02503___yllA.1.9828.seq
# -bsequence dna-align/RBAM_014980___yllA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02503___yllA-RBAM_014980___yllA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02503___yllA-RBAM_014980___yllA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02503___yllA
# 2: RBAM_014980___yllA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1657
# Identity: 1239/1657 (74.8%)
# Similarity: 1239/1657 (74.8%)
# Gaps: 74/1657 ( 4.5%)
# Score: 4497.0
#
#
#=======================================
BSNT_02503___ 1 ATGCAGCTAACTGAACTTTCCATCAAAAATCAGAATGTGTTTGTACAGCA 50
||||||||||||||||||||||||||||.|||.|||..||||||.|||||
RBAM_014980__ 1 ATGCAGCTAACTGAACTTTCCATCAAAAGTCAAAATAAGTTTGTGCAGCA 50
BSNT_02503___ 51 CTATATAGATGGCAAAGAAGAAATGTCTTCTTTTTTTGATTACAGTATTC 100
|||||||||||| ||||.|.||||||||.|||||||||||...|||||
RBAM_014980__ 51 CTATATAGATGG---AGAAAACATGTCTTCATTTTTTGATTATGATATTC 97
BSNT_02503___ 101 A-TCATAAGGACATGTGGCGCGAAA---GACTGGAAGACTTATCTTC--- 143
| ||| .|||||.|.|||| ||| |.||..|.|||.|.|||||
RBAM_014980__ 98 ATTCA-GAGGACGTATGGC---AAAAGCGGCTTCATGACCTGTCTTCGCA 143
BSNT_02503___ 144 -CCGGTTTTTCGCAAGAGAGGAATTGGCGGCGTACTTAACCTCTTACCAT 192
||| ||.||.|||||.|||||.||||..||.|||.||||.||.||.
RBAM_014980__ 144 GCCG----TTTGCCAGAGAAGAATTAGCGGATTATTTATCCTCCTATCAC 189
BSNT_02503___ 193 AATAAATTCGGTTCAAGT-----GCGATGCAGTCTGCTATTGAGAAGCTG 237
.|.|||| ||| |.| ||.||||||.|..|.||.||.||.|||
RBAM_014980__ 190 GAAAAAT----TTC-ACTCCGCCGCCATGCAGGCCTCCATCGAAAAACTG 234
BSNT_02503___ 238 AAGGACCCGTCAAGTGCCGCTGTAGTCGGCGGACAGCAGGCAGGACTTTT 287
|..||.||...|||.||.||.|||||.|||||.||||||||.||.|||||
RBAM_014980__ 235 AGAGATCCAAAAAGCGCAGCGGTAGTAGGCGGCCAGCAGGCCGGTCTTTT 284
BSNT_02503___ 288 AACAGGACCGCTTTACACCATACATAAAATCATTTCAATCATTGTTTTAG 337
|||.||.||.||||||||||||||||||||.||.||.||.||.||..|.|
RBAM_014980__ 285 AACGGGGCCTCTTTACACCATACATAAAATTATCTCCATTATCGTACTTG 334
BSNT_02503___ 338 CAAAGCAACAAGAAAAGGAACTGCAAGTGCCTGTCATACCAATCTTCTGG 387
|.|..||.||.|||.|||...||||..|.||||||.|.||.||.||||||
RBAM_014980__ 335 CCAGACAGCAGGAAGAGGCGTTGCAGATTCCTGTCGTTCCGATTTTCTGG 384
BSNT_02503___ 388 GTGGCTGGAGAAGACCACGATTTGGATGAGATTAATTTTGTTCACACATC 437
|||||.||.|||||.||||||.||||.||.||.||||||||.||.||.||
RBAM_014980__ 385 GTGGCGGGTGAAGATCACGATCTGGAAGAAATCAATTTTGTGCATACGTC 434
BSNT_02503___ 438 TGAAGAGAAT---GGGCCTGTGAAAAAAAAGCTGCCTCAGTCTTATTGGA 484
...||||||| ||.||.||||||.|.||.|||||.|||||.||.||||
RBAM_014980__ 435 AACAGAGAATAAAGGTCCGGTGAAACAGAAACTGCCGCAGTCGTACTGGA 484
BSNT_02503___ 485 AGAAATCATCAGCCGCGAGTACATCGCTTGATCAGGAAAAGTGTGCCGCG 534
|.|||.||||.||.||.|..||...|||||||||||||||.||.||.||.
RBAM_014980__ 485 AAAAAACATCGGCGGCTAAAACCGAGCTTGATCAGGAAAAATGCGCGGCT 534
BSNT_02503___ 535 TGGATAGATGATGTTTTTGCCGCTTTTGAAGAAACAGACCATACGAATAC 584
|||||.|||||.||.||.||.||||||||.||.||.||.||.||.||.||
RBAM_014980__ 535 TGGATTGATGAAGTGTTCGCTGCTTTTGAGGAGACGGATCACACAAACAC 584
BSNT_02503___ 585 ACTTCTCGACAATGTGAAACGATGTTTAAGGGAATCTGTTACGTTTACTG 634
|||.||..|.||.|||||.|||||||||.|...|||.|..||.||.||.|
RBAM_014980__ 585 ACTCCTTCAAAACGTGAAGCGATGTTTACGCTCATCAGAGACATTCACGG 634
BSNT_02503___ 635 ACTTCTTTGAACTGCTGATCGCGGATTTGTTCCAAGAAG-AGGGCTTAGT 683
||||.|||||||||.|||||||.||.|||||.||||||| |||.|||| |
RBAM_014980__ 635 ACTTTTTTGAACTGTTGATCGCCGACTTGTTTCAAGAAGAAGGCCTTA-T 683
BSNT_02503___ 684 TTTATTAAATTCTGGGGATCCGGGGATTAAAAAGCTGGAAACGGCCATGT 733
|.|..|.|||||.||.||||||||||||||||||||||||||||..||||
RBAM_014980__ 684 TCTGATGAATTCGGGAGATCCGGGGATTAAAAAGCTGGAAACGGGTATGT 733
BSNT_02503___ 734 TCCAAAAGATTCTTCGAGAAAATGATGAACTCGCCCGGGCTGTATCAGAT 783
|.||..|||||.|...|.|.|||.|||||||.|||...||.||.|||||.
RBAM_014980__ 734 TTCAGCAGATTTTAAAACACAATCATGAACTTGCCAAAGCCGTGTCAGAC 783
BSNT_02503___ 784 CAGCAG-GCCTTCATGCGTCAAGCAGGCTACAAACCGATTATCGAGTCCG 832
|||||| |.||| |||||..||||.||.||..|.||||||||.||.| ||
RBAM_014980__ 784 CAGCAGCGTCTT-ATGCGGGAAGCCGGTTATCATCCGATTATTGAAT-CG 831
BSNT_02503___ 833 GA-AAAGAGCAGGCGAATCTGTTTTATGAATACGAAGAAGAGCGTTTTTT 881
|| |||||.|||||.|||||||||||.|||.||||.|.|||||||||.||
RBAM_014980__ 832 GACAAAGATCAGGCCAATCTGTTTTACGAACACGAGGGAGAGCGTTTCTT 881
BSNT_02503___ 882 AATTGAAAAAGATAACGGCCGATTTGTCATCAAAGAGCTTGATCTAGGA- 930
||||||||||||.||||||...||||||||.||.||||||||||| ||
RBAM_014980__ 882 AATTGAAAAAGAAAACGGCGTTTTTGTCATTAAGGAGCTTGATCT--GAA 929
BSNT_02503___ 931 -TGGACGATGGATGAACTTCATACACATATGGAAGAACATCCAGAGCGTT 979
|||||||..||.||.||||||||.||||||||||||.|.||.||..|||
RBAM_014980__ 930 GTGGACGAACGACGAGCTTCATACCCATATGGAAGAAAAACCGGAATGTT 979
BSNT_02503___ 980 TCAGCAACAATGTTGTAACGAGACCGTTAATGCAGGAATTTCTCATTCCG 1029
|||||||.||.|||||.||.||.|||.|.||||||||.||||||||.|||
RBAM_014980__ 980 TCAGCAATAACGTTGTGACAAGGCCGCTTATGCAGGAGTTTCTCATCCCG 1029
BSNT_02503___ 1030 ACTTTAGCATTTATTGCAGGGCCTGGAGAAATCAACTATTGGGGCGAGCT 1079
|||.|.||.|||||.||.||.||.||.||||||||.||||||||.|||||
RBAM_014980__ 1030 ACTCTGGCGTTTATCGCGGGACCGGGGGAAATCAATTATTGGGGTGAGCT 1079
BSNT_02503___ 1080 CAAACAGGCTTTTGCGGTGATGGG-TTTCAAAATGCCTCCTGTCATGCCA 1128
.||.|.||||||..|..|.||||| |||| ..|||.|.||.||..||||.
RBAM_014980__ 1080 GAAGCGGGCTTTCTCATTAATGGGCTTTC-GCATGACGCCGGTAGTGCCG 1128
BSNT_02503___ 1129 AGGCTGAACATTACGATACTTGAGCGGCATATTGAGAAAAAACTGGCTGA 1178
||.||||||||||||||.||||||||.||||||||.||.||.||..|.||
RBAM_014980__ 1129 AGACTGAACATTACGATTCTTGAGCGCCATATTGAAAAGAAGCTTTCAGA 1178
BSNT_02503___ 1179 ACGGAATATCTCGTTACAAGACGCGATTG-AGAGCGGAACGGA-----GA 1222
||||||||||.||.|.||.||.|||||.| |.|..|.|.|||| ||
RBAM_014980__ 1179 ACGGAATATCCCGCTTCAGGAAGCGATCGAACATGGCACCGGACACCTGA 1228
BSNT_02503___ 1223 ATCAAAGAGAGACATACTTCG-AGCGCCAGATTCCGGAAGAGTTTACGGC 1271
| |||.||.||.||.| ||.| ||||||||||||||||||.|..|
RBAM_014980__ 1229 A------AGACACTTATTTTGAAGAG-CAGATTCCGGAAGAGTTTTCTTC 1271
BSNT_02503___ 1272 GGTGATGGATCAGGCGAAAAGCCAAATTGAAGCGATTCACAAAACG-GTC 1320
.||.|||||.||||||||....||.||||||||..|.|| .||||| |..
RBAM_014980__ 1272 TGTAATGGAACAGGCGAAGTCGCAGATTGAAGCCGTCCA-TAAACGCGCA 1320
BSNT_02503___ 1321 CGGCAGGAGGCGTTAAAGGTTGATCAAAGCATGGAACCTTTACTCCTGAA 1370
.||.|.||.|||.|.|||||.|||..||||.|.||.||..|..|.|.|||
RBAM_014980__ 1321 AGGGACGAAGCGCTGAAGGTCGATTCAAGCCTTGAGCCGCTCTTACAGAA 1370
BSNT_02503___ 1371 AAATGCCGCTTTTATTCAGGATCAGCTTCAATTCTTAGAGCACACGGTGA 1420
.||||||||.||.|||||.||||||||....||.|||||.|..|||||.|
RBAM_014980__ 1371 GAATGCCGCCTTCATTCAAGATCAGCTCTTGTTTTTAGAACGGACGGTAA 1420
BSNT_02503___ 1421 CGAAGCGAATTGAAGAAAAAGAAG-------GCTACGTCTTGAAGGATTA 1463
||||..|||||||||||||||||| |||.||| ||.||
RBAM_014980__ 1421 CGAAAAGAATTGAAGAAAAAGAAGGTTTTGTGCTGCGT-------GACTA 1463
BSNT_02503___ 1464 TGAAAGAATTCAAAATAGCATTAAGCCGCTTCTTGCGCCGCAAGAACGGA 1513
|||||||||.|||||.|||||.|..|||||....||.|||||.|||||||
RBAM_014980__ 1464 TGAAAGAATCCAAAACAGCATCAGACCGCTCGGCGCTCCGCAGGAACGGA 1513
BSNT_02503___ 1514 TTTGGAATATCATGTATTATTTGAACAGGTACGGTCCAAAATTCTTCACG 1563
||||||||.|.|||||||||.|||||.|.||||||||||||||||||||.
RBAM_014980__ 1514 TTTGGAATGTGATGTATTATCTGAACCGCTACGGTCCAAAATTCTTCACA 1563
BSNT_02503___ 1564 ACATTCAAGAATCTGCCATTTTCTTTTCAAAATCAACATCAAGTTGTCAA 1613
||.|||||..||||||||||||||||||||||.||||||||..|||||||
RBAM_014980__ 1564 ACCTTCAAACATCTGCCATTTTCTTTTCAAAACCAACATCAGATTGTCAA 1613
BSNT_02503___ 1614 ACTTTGA 1620
|||||||
RBAM_014980__ 1614 ACTTTGA 1620
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.