Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02501 and RBAM_014960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence dna-align/BSNT_02501___ylbP.1.9828.seq
# -bsequence dna-align/RBAM_014960___ylbP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02501___ylbP-RBAM_014960___ylbP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02501___ylbP-RBAM_014960___ylbP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02501___ylbP
# 2: RBAM_014960___ylbP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity: 390/490 (79.6%)
# Similarity: 390/490 (79.6%)
# Gaps: 14/490 ( 2.9%)
# Score: 1553.0
#
#
#=======================================
BSNT_02501___ 1 ---TTGACAAAGGTAGAACGTCTGCTTATCAACTATAAAACGCTGGAAGA 47
||||.|| ||||.||.|||||.|||||||.|||.||.||.|||||
RBAM_014960__ 1 GTGTTGAAAA---TAGAGCGACTGCTCATCAACTTTAAGACACTCGAAGA 47
BSNT_02501___ 48 ATTCAAGAAATTCAAAGAATACGGCATTCAGGAGCTTTCAATGCTTGAAG 97
|||.||.|..||.||.||||||||.||.||||||||.||.||||||||||
RBAM_014960__ 48 ATTTAAAAGGTTTAAGGAATACGGGATGCAGGAGCTGTCGATGCTTGAAG 97
BSNT_02501___ 98 AACTTCAGGATAATATTATTGAAAATGACAGCACCTCGCCTTTTTACGGG 147
|.||||||||||||||.|||||||||||||||||||||||||||||||||
RBAM_014960__ 98 ATCTTCAGGATAATATCATTGAAAATGACAGCACCTCGCCTTTTTACGGG 147
BSNT_02501___ 148 ATTTATTTTGGCGATAAACTTGTAGCACGAATGAGCCTGTATCAAGTTAA 197
|||||.||.||.||||||||.||.||..|||||||..|.|||||.||.||
RBAM_014960__ 148 ATTTACTTCGGGGATAAACTAGTGGCGAGAATGAGTTTATATCAGGTAAA 197
BSNT_02501___ 198 C---GGCAAATCGAATCCCTATTTTGACAACCGCCAGGATTATTTGGAGC 244
| |||| |||||||.||||||||..|.||.|||||.|.||||||.|
RBAM_014960__ 198 CGGAGGCA---CGAATCCGTATTTTGATCAGCGTCAGGACTTTTTGGAAC 244
BSNT_02501___ 245 TGTGGAAGCTTGAGGTTCTTCCGGGCTACCAGAACAGGGGATACGGGAGA 294
|.||||||||||||||||||||||||||.||.||||..||||||||.|.|
RBAM_014960__ 245 TTTGGAAGCTTGAGGTTCTTCCGGGCTATCAAAACAACGGATACGGAAAA 294
BSNT_02501___ 295 GC-CTTGGTTGAATTTGCAAAATCATTCAAAATGCCGATCCGGACAAATC 343
|| ||| |||||.|||||||||||.||||.||||||||||.||||||||.
RBAM_014960__ 295 GCGCTT-GTTGATTTTGCAAAATCCTTCAGAATGCCGATCAGGACAAATT 343
BSNT_02501___ 344 CGAGAATGAAATCAGCGGAATTTTGGAACAAAATGAACTTTAAAACTGTT 393
|..|.|||||||||||.||.||.|||.|.||.|||||.|||.|..|.|||
RBAM_014960__ 344 CACGCATGAAATCAGCAGATTTCTGGGATAAGATGAATTTTGAGCCCGTT 393
BSNT_02501___ 394 AAGTATGATATGGCGCGGGACAAAGGGGAAAACCCGCTCATCTGGCATCC 443
||.||||||||||||||.||.|||||.|||||.||....|||||||||||
RBAM_014960__ 394 AAATATGATATGGCGCGTGATAAAGGAGAAAATCCTTATATCTGGCATCC 443
BSNT_02501___ 444 TGATATGGATCACGAAATGACACCGGGAGAGTCTGCATAG 483
.||||||||....|||||||||.|.|||||..|.|||||.
RBAM_014960__ 444 CGATATGGACGGTGAAATGACATCCGGAGAAACGGCATAA 483
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