Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02500 and RBAM_014950

See Amino acid alignment / Visit BSNT_02500 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence dna-align/BSNT_02500___ylbO.1.9828.seq
#    -bsequence dna-align/RBAM_014950___ylbO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02500___ylbO-RBAM_014950___ylbO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02500___ylbO-RBAM_014950___ylbO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02500___ylbO
# 2: RBAM_014950___ylbO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 594
# Identity:     430/594 (72.4%)
# Similarity:   430/594 (72.4%)
# Gaps:          30/594 ( 5.1%)
# Score: 1466.0
# 
#
#=======================================

BSNT_02500___      1 TTGACCATTACAAGACAAGATGCTTGGACTCAGGATGAGGATTTGCTGCT     50
                     |||||.||.||.||||||||.||.|||||.||.|||||.|||||||||||
RBAM_014950__      1 TTGACGATAACGAGACAAGACGCGTGGACGCAAGATGAAGATTTGCTGCT     50

BSNT_02500___     51 GGCAGAAGTGGTGCTTCGTCATATTCGAGAGGGAGGAACACAGCTTTCAG    100
                     |||.|||||||||||..|.||||||||.||.||.||.||.||||||||.|
RBAM_014950__     51 GGCCGAAGTGGTGCTCAGGCATATTCGGGAAGGCGGGACCCAGCTTTCCG    100

BSNT_02500___    101 CCTTTGAGGAGGTTGGGAGGGCGCTGACCAGAACCGCGGCAGCCTGTGGT    150
                     |.|||||.||.||.||.||.||||||||.|||||.||.||.|||||.||.
RBAM_014950__    101 CTTTTGAAGAAGTCGGCAGAGCGCTGACGAGAACGGCTGCCGCCTGCGGG    150

BSNT_02500___    151 TTCAGGTGGAACTCGTATGTGAGAAAACAATACCAGTCAGGTATAGAGCT    200
                     |||||.|||||.||.|||||.|||||||||||.||||||||.|||||.||
RBAM_014950__    151 TTCAGATGGAATTCTTATGTCAGAAAACAATATCAGTCAGGGATAGAACT    200

BSNT_02500___    201 TGCAAAAAAGCAAAGGAAAGAACTGAGAAAGCAAATCGGCGTTCATTCGG    250
                     .||.|||||.||..||||.|||.|.||||||||.|||||.||.|||||.|
RBAM_014950__    201 GGCGAAAAAACAGCGGAAGGAATTAAGAAAGCAGATCGGGGTGCATTCCG    250

BSNT_02500___    251 TCAATATGCC--GAATTCCATGAAGCAGACTGCC--TCAGCATCGTCAGA    296
                     .||||.||||  |||  ||.|.||.|||.|| ||  ||.||| .|.|.||
RBAM_014950__    251 CCAATCTGCCGGGAA--CCGTCAAACAGCCT-CCGATCCGCA-GGGCGGA    296

BSNT_02500___    297 AGGAAAACGAGATTTGTCCATTCAGGATGTCATTCAATTTCTCGAACAAT    346
                     ||||.||..|||..||||||||.|.|||||||||...|||||..|.||||
RBAM_014950__    297 AGGAGAAAAAGAGCTGTCCATTGATGATGTCATTTTGTTTCTGCAGCAAT    346

BSNT_02500___    347 TCAAAGAAGCACCGTCTGCACAAGAATTTCAGCTTGAAAGGGAAAAATTG    396
                     |.|||||..|.||..|.|||...||..|.|..|.|||||..||||||.|.
RBAM_014950__    347 TTAAAGAGTCGCCAGCCGCAGCGGATATGCGTCATGAAAAAGAAAAACTC    396

BSNT_02500___    397 AAGGAGCAAAT--CCAATCGCTGCAAAAAGAGCTTGAGGATTTGCG-GAG    443
                     |..||.||..|  ||  .|||||||||||||..|.||||||.|||| |||
RBAM_014950__    397 ACAGAACAGCTGACC--GCGCTGCAAAAAGAAGTCGAGGATCTGCGTGAG    444

BSNT_02500___    444 TGAAAATCAGACATTGCGGAATCAGCTAGAGATGACAGAAGAGGATTACA    493
                      ||||||.|.|..|||.|.||..||||.||||||||.|||||.|||||.|
RBAM_014950__    445 -GAAAATGAAAGCTTGAGAAACAAGCTGGAGATGACGGAAGAAGATTATA    493

BSNT_02500___    494 AGGCACTGATCGATATCATGGATCGGGCCAGAAAAATGGTTGT----TTC    539
                     |.||..|.||.||.||.|||||..|.||.||||    ||.|||    |||
RBAM_014950__    494 AAGCGTTAATTGACATTATGGACAGAGCGAGAA----GGATGTTCAATTC    539

BSNT_02500___    540 GAAGGAAGACGGAAGAATGAAAAAAACGGCTCAAGAAAC-GTAA    582
                     .||.|||||||..||      ||||.||||.| |||..| ||||
RBAM_014950__    540 AAAAGAAGACGACAG------AAAATCGGCGC-AGAGCCTGTAA    576


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