Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02500 and RBAM_014950
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:15
# Commandline: needle
# -asequence dna-align/BSNT_02500___ylbO.1.9828.seq
# -bsequence dna-align/RBAM_014950___ylbO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02500___ylbO-RBAM_014950___ylbO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02500___ylbO-RBAM_014950___ylbO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02500___ylbO
# 2: RBAM_014950___ylbO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 594
# Identity: 430/594 (72.4%)
# Similarity: 430/594 (72.4%)
# Gaps: 30/594 ( 5.1%)
# Score: 1466.0
#
#
#=======================================
BSNT_02500___ 1 TTGACCATTACAAGACAAGATGCTTGGACTCAGGATGAGGATTTGCTGCT 50
|||||.||.||.||||||||.||.|||||.||.|||||.|||||||||||
RBAM_014950__ 1 TTGACGATAACGAGACAAGACGCGTGGACGCAAGATGAAGATTTGCTGCT 50
BSNT_02500___ 51 GGCAGAAGTGGTGCTTCGTCATATTCGAGAGGGAGGAACACAGCTTTCAG 100
|||.|||||||||||..|.||||||||.||.||.||.||.||||||||.|
RBAM_014950__ 51 GGCCGAAGTGGTGCTCAGGCATATTCGGGAAGGCGGGACCCAGCTTTCCG 100
BSNT_02500___ 101 CCTTTGAGGAGGTTGGGAGGGCGCTGACCAGAACCGCGGCAGCCTGTGGT 150
|.|||||.||.||.||.||.||||||||.|||||.||.||.|||||.||.
RBAM_014950__ 101 CTTTTGAAGAAGTCGGCAGAGCGCTGACGAGAACGGCTGCCGCCTGCGGG 150
BSNT_02500___ 151 TTCAGGTGGAACTCGTATGTGAGAAAACAATACCAGTCAGGTATAGAGCT 200
|||||.|||||.||.|||||.|||||||||||.||||||||.|||||.||
RBAM_014950__ 151 TTCAGATGGAATTCTTATGTCAGAAAACAATATCAGTCAGGGATAGAACT 200
BSNT_02500___ 201 TGCAAAAAAGCAAAGGAAAGAACTGAGAAAGCAAATCGGCGTTCATTCGG 250
.||.|||||.||..||||.|||.|.||||||||.|||||.||.|||||.|
RBAM_014950__ 201 GGCGAAAAAACAGCGGAAGGAATTAAGAAAGCAGATCGGGGTGCATTCCG 250
BSNT_02500___ 251 TCAATATGCC--GAATTCCATGAAGCAGACTGCC--TCAGCATCGTCAGA 296
.||||.|||| ||| ||.|.||.|||.|| || ||.||| .|.|.||
RBAM_014950__ 251 CCAATCTGCCGGGAA--CCGTCAAACAGCCT-CCGATCCGCA-GGGCGGA 296
BSNT_02500___ 297 AGGAAAACGAGATTTGTCCATTCAGGATGTCATTCAATTTCTCGAACAAT 346
||||.||..|||..||||||||.|.|||||||||...|||||..|.||||
RBAM_014950__ 297 AGGAGAAAAAGAGCTGTCCATTGATGATGTCATTTTGTTTCTGCAGCAAT 346
BSNT_02500___ 347 TCAAAGAAGCACCGTCTGCACAAGAATTTCAGCTTGAAAGGGAAAAATTG 396
|.|||||..|.||..|.|||...||..|.|..|.|||||..||||||.|.
RBAM_014950__ 347 TTAAAGAGTCGCCAGCCGCAGCGGATATGCGTCATGAAAAAGAAAAACTC 396
BSNT_02500___ 397 AAGGAGCAAAT--CCAATCGCTGCAAAAAGAGCTTGAGGATTTGCG-GAG 443
|..||.||..| || .|||||||||||||..|.||||||.|||| |||
RBAM_014950__ 397 ACAGAACAGCTGACC--GCGCTGCAAAAAGAAGTCGAGGATCTGCGTGAG 444
BSNT_02500___ 444 TGAAAATCAGACATTGCGGAATCAGCTAGAGATGACAGAAGAGGATTACA 493
||||||.|.|..|||.|.||..||||.||||||||.|||||.|||||.|
RBAM_014950__ 445 -GAAAATGAAAGCTTGAGAAACAAGCTGGAGATGACGGAAGAAGATTATA 493
BSNT_02500___ 494 AGGCACTGATCGATATCATGGATCGGGCCAGAAAAATGGTTGT----TTC 539
|.||..|.||.||.||.|||||..|.||.|||| ||.||| |||
RBAM_014950__ 494 AAGCGTTAATTGACATTATGGACAGAGCGAGAA----GGATGTTCAATTC 539
BSNT_02500___ 540 GAAGGAAGACGGAAGAATGAAAAAAACGGCTCAAGAAAC-GTAA 582
.||.|||||||..|| ||||.||||.| |||..| ||||
RBAM_014950__ 540 AAAAGAAGACGACAG------AAAATCGGCGC-AGAGCCTGTAA 576
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