Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02492 and RBAM_014880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:15
# Commandline: needle
# -asequence dna-align/BSNT_02492___coaD.1.9828.seq
# -bsequence dna-align/RBAM_014880___coaD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02492___coaD-RBAM_014880___coaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02492___coaD-RBAM_014880___coaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02492___coaD
# 2: RBAM_014880___coaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 486
# Identity: 386/486 (79.4%)
# Similarity: 386/486 (79.4%)
# Gaps: 3/486 ( 0.6%)
# Score: 1531.0
#
#
#=======================================
BSNT_02492___ 1 GTGGCGAGTATAGCTGTCTGTCCCGGCAGTTTTGATCCGGTGACCTACGG 50
|||||.|||||||||||.||||||||.|||||||||||.||.||||||||
RBAM_014880__ 1 GTGGCAAGTATAGCTGTATGTCCCGGAAGTTTTGATCCCGTCACCTACGG 50
BSNT_02492___ 51 GCATCTGGACATCATCAAACGCGGGGCGCATATTTTTGAACAAGTGTATG 100
.|||||||||||.||||.|||.|||||..|..|.|||||.||.|||||.|
RBAM_014880__ 51 ACATCTGGACATTATCAGACGGGGGGCAAACGTGTTTGAGCAGGTGTACG 100
BSNT_02492___ 101 TATGTGTGCTGAATAATTCTTCAAAAAAGCCTTTGTTCAGTGTGGAAGAA 150
||||.|||||.|||||||||||.||..||||..||||.|..||.||.|||
RBAM_014880__ 101 TATGCGTGCTCAATAATTCTTCTAAGCAGCCGCTGTTTACAGTTGAGGAA 150
BSNT_02492___ 151 CGGTGTGAGCTTCTGAGAGAAGTGACAAAAGACATTCCGAACATAACAGT 200
||.||||||||..|.||||||||||||||||||||.|||||..|.||.||
RBAM_014880__ 151 CGATGTGAGCTGTTAAGAGAAGTGACAAAAGACATACCGAATGTTACGGT 200
BSNT_02492___ 201 TGAAACATCGCAAGGCCTGTTAATTGATTATGCAAAAAGAAAAAATGCGA 250
.||.||.||.||.||.||||||||.||.|||||.||||.|||....||||
RBAM_014880__ 201 CGAGACGTCACAGGGACTGTTAATCGACTATGCGAAAAAAAAGCGGGCGA 250
BSNT_02492___ 251 AAGCGATTTTAAGAGGCTTGAGAGCTGTATCTGATTTTGAATACGAGATG 300
|.||||||.|.||.||..|.|||||.||.|||||.||.|||||.||||||
RBAM_014880__ 251 AGGCGATTATCAGGGGGCTCAGAGCCGTTTCTGACTTCGAATATGAGATG 300
BSNT_02492___ 301 CAGGGGACATCAGTAAACCGTGTGCTTGATGAATCTATTGAGACATTTTT 350
||||||||.||.||.|||||.|||||.||.|||||.||.||.||.|||||
RBAM_014880__ 301 CAGGGGACTTCCGTCAACCGCGTGCTCGACGAATCAATAGAAACTTTTTT 350
BSNT_02492___ 351 TATGATGACAAACAATCAATATTCGTTTCTAAGTTCAAGCATCGTAAAAG 400
|||||||||.||||||||.||.||.|||.|||||||||||||||||||||
RBAM_014880__ 351 TATGATGACGAACAATCAGTACTCTTTTTTAAGTTCAAGCATCGTAAAAG 400
BSNT_02492___ 401 AAGTGGCGAGATACAACGGCTCGGTATCAGAGTTTGTACCGCCGGAAGTA 450
||||.||.|.|||.|||||..|.||.|||||||||||.||.||||||||.
RBAM_014880__ 401 AAGTCGCAAAATATAACGGGCCTGTTTCAGAGTTTGTTCCTCCGGAAGTT 450
BSNT_02492___ 451 GAGCTGGCGCTTCAGCAAAAATTCAGACAAGGATGA 486
||.|.||||||...|||.|||||.| ||||||||
RBAM_014880__ 451 GAACAGGCGCTGATGCAGAAATTTA---AAGGATGA 483
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