Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02487 and RBAM_014850

See Amino acid alignment / Visit BSNT_02487 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence dna-align/BSNT_02487___ylbF.1.9828.seq
#    -bsequence dna-align/RBAM_014850___ylbF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02487___ylbF-RBAM_014850___ylbF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02487___ylbF-RBAM_014850___ylbF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02487___ylbF
# 2: RBAM_014850___ylbF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity:     372/450 (82.7%)
# Similarity:   372/450 (82.7%)
# Gaps:           0/450 ( 0.0%)
# Score: 1548.0
# 
#
#=======================================

BSNT_02487___      1 ATGTATGCGACGATGGAATCCGTGCGGCTTCAAAGTGAAGCTCAGCAGCT     50
                     ||||||||.||.||.||.|||||...|||||||||||||||..|||||||
RBAM_014850__      1 ATGTATGCAACAATTGAGTCCGTCAAGCTTCAAAGTGAAGCGGAGCAGCT     50

BSNT_02487___     51 TGCCGAGATGATTCTGCAGTCGGAGACGGCTGAGAACTACCGCAATTGTT    100
                     |||||..||||||||||||||.|||||||||||.||.||||||.||||||
RBAM_014850__     51 TGCCGGCATGATTCTGCAGTCTGAGACGGCTGAAAATTACCGCGATTGTT    100

BSNT_02487___    101 ACAAGCGTCTCCAGGAAGATGAAGAGGCAGGTCGGATTATTCGTTCTTTT    150
                     ||||||||||||..|||||||||||||||||.|||||.||||||||||||
RBAM_014850__    101 ACAAGCGTCTCCGTGAAGATGAAGAGGCAGGGCGGATCATTCGTTCTTTT    150

BSNT_02487___    151 ATCAAAATAAAAGAGCAGTATGAGGATGTACAGCGTTTTGGCAAATATCA    200
                     ||.|...|.||||||||||||||||||||.|||||.|||||||||||.||
RBAM_014850__    151 ATGAGCGTTAAAGAGCAGTATGAGGATGTGCAGCGCTTTGGCAAATACCA    200

BSNT_02487___    201 TCCTGACTATAGAGAAATATCCCGGAAAATGAGGGAGATCAAACGTGAGC    250
                     ||||||.||||||||.||.|||||.||||||||.||.||.||.||.||.|
RBAM_014850__    201 TCCTGATTATAGAGAGATTTCCCGCAAAATGAGAGAAATGAAGCGGGAAC    250

BSNT_02487___    251 TGGACCTGAACGACAAGGTGGCTGACTTCAAGAGAGCTGAAAATGAGCTC    300
                     ||||..|.|||||.||||||||.||.||.||.|.|||.||.|.||||||.
RBAM_014850__    251 TGGATTTAAACGATAAGGTGGCCGAATTTAAAAAAGCGGAGACTGAGCTT    300

BSNT_02487___    301 CAGTCCATTCTTGATGAGGTCAGCGTTGAGATTGGGACAGCTGTTTCGGA    350
                     |||||..|.|||||.|||.|||||.||||..|.||.||.||.||.|||||
RBAM_014850__    301 CAGTCGCTGCTTGACGAGATCAGCATTGAACTCGGAACGGCCGTCTCGGA    350

BSNT_02487___    351 GCATGTGAAAGTTCCGACTGGGAACCCTTATTTTGACGGTTTGTCTTCAT    400
                     ||||||.|||||.|||||.|||||.||||||||||||||..||||.||.|
RBAM_014850__    351 GCATGTAAAAGTGCCGACGGGGAATCCTTATTTTGACGGCCTGTCATCCT    400

BSNT_02487___    401 GCGGAGGCGGCTGCGGTTCAGGCGGAAGCTGCGGATGTAAAGTGTCCTGA    450
                     ||||.|||||.||||||||.|||||..||||||||||.|||||.||||||
RBAM_014850__    401 GCGGCGGCGGGTGCGGTTCCGGCGGCGGCTGCGGATGCAAAGTTTCCTGA    450


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