Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02486 and RBAM_014840

See Amino acid alignment / Visit BSNT_02486 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:14
# Commandline: needle
#    -asequence dna-align/BSNT_02486___ylbE.1.9828.seq
#    -bsequence dna-align/RBAM_014840___ylbE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02486___ylbE-RBAM_014840___ylbE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02486___ylbE-RBAM_014840___ylbE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02486___ylbE
# 2: RBAM_014840___ylbE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 245
# Identity:     195/245 (79.6%)
# Similarity:   195/245 (79.6%)
# Gaps:          10/245 ( 4.1%)
# Score: 772.0
# 
#
#=======================================

BSNT_02486___      1 ATGCGCAAAGAGGTTCAGGAATATATTTTAGCAAACGAAGAACGGAAACG     50
                     |||||.||||||||||||||||..||.|..|||.|.||.|||||||||||
RBAM_014840__      1 ATGCGAAAAGAGGTTCAGGAATTCATATCCGCAGATGAGGAACGGAAACG     50

BSNT_02486___     51 ATTCAT-CAGAGAACAG----CCGATATGGTACCGCAGACTTTCAAGAAA     95
                     .||.|| |.|    |||    ||| |.|||||||||||||||.|.|||||
RBAM_014840__     51 GTTTATACGG----CAGCGCCCCG-TCTGGTACCGCAGACTTGCGAGAAA     95

BSNT_02486___     96 ACCGGATGATCTGTCCTCCTTTCAGCTTGAAATGATGAATTTTTATGAAA    145
                     ||||||.|||||....||.|||||||||||.|||||||||||||||||||
RBAM_014840__     96 ACCGGACGATCTCAATTCTTTTCAGCTTGACATGATGAATTTTTATGAAA    145

BSNT_02486___    146 AAACCATTCCGCATCGGGTGAACCAGTTTACGAACGGGATTCAAATGGCG    195
                     |.||.||.|||||||||||.|.|||.||..|.||||||||||||||||||
RBAM_014840__    146 AGACGATACCGCATCGGGTAAGCCAATTCTCAAACGGGATTCAAATGGCG    195

BSNT_02486___    196 CAAATGATGATGCAAATGTTTCAAGCGATGCGGACAAAAGATTAA    240
                     ||.|||||||||||.|||.||||.||.|||||..||.|.||||||
RBAM_014840__    196 CAGATGATGATGCAGATGGTTCACGCCATGCGTTCACAGGATTAA    240


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