Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02477 and RBAM_014770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence dna-align/BSNT_02477___ctaE.1.9828.seq
# -bsequence dna-align/RBAM_014770___ctaE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02477___ctaE-RBAM_014770___ctaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02477___ctaE-RBAM_014770___ctaE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02477___ctaE
# 2: RBAM_014770___ctaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 627
# Identity: 502/627 (80.1%)
# Similarity: 502/627 (80.1%)
# Gaps: 6/627 ( 1.0%)
# Score: 2012.0
#
#
#=======================================
BSNT_02477___ 1 ATGCAAGTTCAAGAAAAATTCACCGCAGAAACCTTTCCAGCTTCTCCCGA 50
|||||..|.||.||||||.|.||.||.|||||||||||.||||||||.||
RBAM_014770__ 1 ATGCAGCTGCAGGAAAAAATGACGGCTGAAACCTTTCCGGCTTCTCCTGA 50
BSNT_02477___ 51 AAAAGTAACCCTGGAAGGGAAAAATAAATTTTTAGGCTTTTGGCTTTTTC 100
|||||.|||.|||||||||||||||||.|||||.||.||||||||.||||
RBAM_014770__ 51 AAAAGCAACGCTGGAAGGGAAAAATAAGTTTTTGGGATTTTGGCTGTTTC 100
BSNT_02477___ 101 TTGGCGGAGAGACTGTTCTGTTTGCGTCTCTCTTCGCCACGTTTCTTGCG 150
|.|||||.||.||.||||||||.||.||.||.||.||.||.||.|||||.
RBAM_014770__ 101 TCGGCGGGGAAACGGTTCTGTTCGCCTCGCTATTTGCAACATTCCTTGCT 150
BSNT_02477___ 151 CTTCGGAATTCAAATGCCGGTGATCCGCCTACGACGGAAATGTTCGATGT 200
.|.|||.|.||.||.|||||.|..|||.|.||..|.||.|||||.||..|
RBAM_014770__ 151 TTACGGGAATCTAAAGCCGGAGGGCCGTCAACAGCTGAGATGTTTGAGCT 200
BSNT_02477___ 201 GACACTTGTATTCATTGCCACAATGCTTCTATTAACGAGCAGTTTAACGA 250
|.|..|.|||||.||.||.||.||||||||.|||||||||||.|||||||
RBAM_014770__ 201 GCCGATCGTATTTATCGCGACGATGCTTCTTTTAACGAGCAGCTTAACGA 250
BSNT_02477___ 251 GTGTGTACGCGATGTACCACATGAAGAACTTTTCCTTCGGCAAGATGCAG 300
|||||||.||||||||.||.|||||.||.||.|||||....||.||||||
RBAM_014770__ 251 GTGTGTATGCGATGTATCATATGAAAAATTTCTCCTTTAAAAAAATGCAG 300
BSNT_02477___ 301 CTTTGGC---TGGGAATTACGATTTTATTGGGGGCCGGCTTTTTAGGACT 347
.|.|||| ||| ||||..||||||||||.||.||.||||||||..|
RBAM_014770__ 301 GTGTGGCTTTTGG---TTACCGTTTTATTGGGAGCAGGATTTTTAGGGGT 347
BSNT_02477___ 348 GGAAATCTATGAGTTCAAGCATTACACCCATGAATTTGGCTTTACCATCA 397
.|||||||||||.||.|.|||||||||.||.|||||.|||||||||||.|
RBAM_014770__ 348 AGAAATCTATGAATTTATGCATTACACTCACGAATTCGGCTTTACCATTA 397
BSNT_02477___ 398 CAAGCTCTGCCCTTGGTTCTGCGTTTTACACGCTTGTCGGTACACACGGC 447
||||||||||.||.||.||.||||||||||||||.|||||.||||||||.
RBAM_014770__ 398 CAAGCTCTGCGCTCGGCTCAGCGTTTTACACGCTCGTCGGCACACACGGA 447
BSNT_02477___ 448 GCCCACGTGGCATTTGGGCTTATGTGGATCAGCACGCTTATGATCCGCAA 497
||.||||||||.||.|||||..|||||||||||.||||.||||||||.||
RBAM_014770__ 448 GCACACGTGGCGTTCGGGCTGTTGTGGATCAGCGCGCTGATGATCCGGAA 497
BSNT_02477___ 498 TGCTAAGAGAGGGCTGAATCTGTATACGGCGCCTAAGTTTTACGTTGCCA 547
|||.||.||||||||.|..||.||||..|||||.||.|.|||.||.||||
RBAM_014770__ 498 TGCAAAAAGAGGGCTCAGCCTTTATAATGCGCCGAAATATTATGTGGCCA 547
BSNT_02477___ 548 GCCTTTATTGGCACTTTATTGATGTCGTGTGGGTCTTCATCTTTACCGTT 597
||.|.||||||||.|||||.|||||||||||||||||.||||||||||||
RBAM_014770__ 548 GCTTATATTGGCATTTTATCGATGTCGTGTGGGTCTTTATCTTTACCGTT 597
BSNT_02477___ 598 GTATATTTAATGGGGATGGTGGGATAA 624
||||||||.||||||||||||||||||
RBAM_014770__ 598 GTATATTTGATGGGGATGGTGGGATAA 624
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