Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02475 and RBAM_014750
See
Amino acid alignment /
Visit
BSNT_02475 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:13
# Commandline: needle
# -asequence dna-align/BSNT_02475___ctaC.1.9828.seq
# -bsequence dna-align/RBAM_014750___ctaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02475___ctaC-RBAM_014750___ctaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02475___ctaC-RBAM_014750___ctaC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02475___ctaC
# 2: RBAM_014750___ctaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1074
# Identity: 856/1074 (79.7%)
# Similarity: 856/1074 (79.7%)
# Gaps: 6/1074 ( 0.6%)
# Score: 3382.0
#
#
#=======================================
BSNT_02475___ 1 ATGGTAAAGCATTGGCGTCTTATTTTATTATTAGCCTTAGTGCCGCTTCT 50
|||.||||||.||||||||||.|.|.||||||||||||||||||||||.|
RBAM_014750__ 1 ATGTTAAAGCGTTGGCGTCTTTTATCATTATTAGCCTTAGTGCCGCTTTT 50
BSNT_02475___ 51 ATTAAGCGGATGTGGAAAACCTTTTTTATCCACGCTCAAGCCTGCTGGCG 100
|||.|||||.|||||||||||.|||.|.|||||.|||||||||||.||||
RBAM_014750__ 51 ATTGAGCGGCTGTGGAAAACCGTTTCTGTCCACACTCAAGCCTGCCGGCG 100
BSNT_02475___ 101 AGGTGGCTGATAAACAGTTTGACCTGACAGTGCTCAGCACATTGATTATG 150
|.||||||||||||||.|.|||.|||||.||||||||||||.|.||.|||
RBAM_014750__ 101 AAGTGGCTGATAAACAATATGATCTGACGGTGCTCAGCACACTTATCATG 150
BSNT_02475___ 151 GTGGTTGTTGTTGCAGTAGTATCTGTTATCTTCTTTTATGTGATTGTGAG 200
||.||.||.|||||.||.|||.|.|||||.||||||||.||.||||||||
RBAM_014750__ 151 GTTGTCGTCGTTGCGGTCGTAGCAGTTATTTTCTTTTACGTCATTGTGAG 200
BSNT_02475___ 201 ATTCAGAAGATCACGGGTCGGTGAGAACACGATACCGAAACAGGTAGAGG 250
|||||||.|.||.||..|.||.||..|||||||||||||||||||.||||
RBAM_014750__ 201 ATTCAGACGGTCGCGTATAGGGGAAGACACGATACCGAAACAGGTGGAGG 250
BSNT_02475___ 251 GGAATAAATTTTTAGAAATCACATGGACCGTGATCCCGATTTTGCTGCTC 300
||||....||||||||||||||.||||||||.||.|||||..||||.||.
RBAM_014750__ 251 GGAACCGTTTTTTAGAAATCACCTGGACCGTTATTCCGATCCTGCTTCTG 300
BSNT_02475___ 301 ATTATTCTTGTGATTCCTGTTGTATTATATACGCTAGAGCTAGCGGACAC 350
|||||||||||.|||||.|||||..|..||||..|.|.|||.|||||.||
RBAM_014750__ 301 ATTATTCTTGTCATTCCGGTTGTCATCGATACATTGGCGCTGGCGGATAC 350
BSNT_02475___ 351 ATCACCAATGGATAAAAAAGGCCGCAAAGCTGAGGATGCTCTTGTAGTCA 400
.||.||.||||||||.|||..|||.|||||.||||||||.||.||..|.|
RBAM_014750__ 351 GTCGCCGATGGATAAGAAAAACCGTAAAGCAGAGGATGCGCTCGTGATTA 400
BSNT_02475___ 401 ATGTTAGGGCAAATTTATACTGGTGGGAGTTTGAGTACCCTGATTACGAC 450
||||.|||||.|||||||||||||||||.||.|||||.||||||||||..
RBAM_014750__ 401 ATGTAAGGGCGAATTTATACTGGTGGGAATTCGAGTATCCTGATTACGGG 450
BSNT_02475___ 451 ATTATCACAAGCCAGGAGCTGATTGTACCGACAGATCAGCGTGTATATTT 500
.||.|.|||||.|||||||||||.||.||.||||||.|.||.||.|||||
RBAM_014750__ 451 TTTGTGACAAGTCAGGAGCTGATCGTTCCCACAGATGAACGCGTCTATTT 500
BSNT_02475___ 501 TAATTTAAAAGCCTCTGATGTAAAACATTCCTTCTGGATTCCTTCAGTTG 550
.||..|.||..||||.|||||.|||||.||.|||||||||||.||||..|
RBAM_014750__ 501 CAAGCTGAAGTCCTCAGATGTGAAACACTCTTTCTGGATTCCGTCAGCCG 550
BSNT_02475___ 551 GAGGAAAACTTGATACGAATACGGATAATGAAAATAAGTTCTTCCTGACA 600
|.||||||.|.|||||.||||||||||||||.||||..|||||.|||||.
RBAM_014750__ 551 GGGGAAAAATCGATACAAATACGGATAATGACAATACTTTCTTTCTGACC 600
BSNT_02475___ 601 TTTGATTCAAAACGAAGCAAAGAGGCAGGAG-ATATGTTTTTTGGGAAGT 649
||.|||||.|||||.||||||||.||.|||| |||| ||.||.|||||.|
RBAM_014750__ 601 TTCGATTCTAAACGCAGCAAAGAAGCGGGAGAATAT-TTCTTCGGGAAAT 649
BSNT_02475___ 650 GTGCAGAGCTTTGCGGCCCTTCACATGCGCTGATGGATTTTAAGGTGAAG 699
|.||||||||.|||||.|||||||||||||||||||||||.||.|||||.
RBAM_014750__ 650 GCGCAGAGCTGTGCGGACCTTCACATGCGCTGATGGATTTCAAAGTGAAA 699
BSNT_02475___ 700 ACGATGTCTGCAAAAGAATTTCAGGGCTGGACAAAAGAAATGAAAAACTA 749
.||.||.|..|||||||||||.|....|||||.||||..||||||||.||
RBAM_014750__ 700 CCGCTGCCGTCAAAAGAATTTAAACAATGGACGAAAGCGATGAAAAATTA 749
BSNT_02475___ 750 TAAATCTACAGCAGAGAGCGATTTGGCTAAGCAGGGTGAAGAACTGTTTA 799
|||...||||.||||...||.|||.||...|||.||.|||||.|||||||
RBAM_014750__ 750 TAAGCATACAACAGACTCCGGTTTAGCCGCGCAAGGAGAAGAGCTGTTTA 799
BSNT_02475___ 800 AAGAGAAAAACTGCCTGAGCTGCCATGCGGTAGAGCCGAATGATAAGCGT 849
|.||.|||||||||||||||||.||||||||.|||||.||||||||.||.
RBAM_014750__ 800 AGGAAAAAAACTGCCTGAGCTGTCATGCGGTTGAGCCCAATGATAAACGG 849
BSNT_02475___ 850 GCAGAAGCCGCTAGAACGGCACCTAACTTGGCGACCTTCGGTGAAAGGAC 899
||.|||||.||.||||||||.||.|||.|.||.||||||||||||.||..
RBAM_014750__ 850 GCTGAAGCGGCAAGAACGGCTCCGAACCTCGCTACCTTCGGTGAACGGGT 899
BSNT_02475___ 900 AAAAGTGGCAGGGGTGAAAGAGGCCAACAAAGAAAATGTGAAGGCTTGGC 949
.||||||||.||..|.||.||.||.||.|||||.|||.|.||.||.||||
RBAM_014750__ 900 CAAAGTGGCCGGCATTAAGGATGCGAATAAAGAGAATATAAAAGCCTGGC 949
BSNT_02475___ 950 TAAAGGACCCTGACAGCATAAAGCCGGGGAACAAAATGACAGGCACATAT 999
|.||..|.||.||||||||.||.|||||.||.||||||||||||||.|||
RBAM_014750__ 950 TGAAAAATCCGGACAGCATTAAACCGGGCAATAAAATGACAGGCACTTAT 999
BSNT_02475___ 1000 CCAAAGCTCTCAGACAGC-GAAACAGATGCGCTTTATGAATACTTAAAAG 1048
||.||||||||.||| || |||||.||||||||.||||||||.|||||||
RBAM_014750__ 1000 CCGAAGCTCTCGGAC-GCTGAAACGGATGCGCTGTATGAATATTTAAAAG 1048
BSNT_02475___ 1049 GCTTAAAAGCGGAAAGCAAGTAG- 1071
|..|.||||||||.|.||||| |
RBAM_014750__ 1049 GGCTGAAAGCGGAGAACAAGT-GA 1071
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.