Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02472 and RBAM_014740
See
Amino acid alignment /
Visit
BSNT_02472 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:13
# Commandline: needle
# -asequence dna-align/BSNT_02472___ctaB.1.9828.seq
# -bsequence dna-align/RBAM_014740___ctaB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02472___ctaB-RBAM_014740___ctaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02472___ctaB-RBAM_014740___ctaB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02472___ctaB
# 2: RBAM_014740___ctaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 921
# Identity: 750/921 (81.4%)
# Similarity: 750/921 (81.4%)
# Gaps: 6/921 ( 0.7%)
# Score: 3068.0
#
#
#=======================================
BSNT_02472___ 1 ATGGCTAACTCCAGAATCTTAAATGATACAGCTATAGACGGACAAATTGA 50
||||||||.||||||||.|||||.||||||||||||||||||||.|||||
RBAM_014740__ 1 ATGGCTAATTCCAGAATTTTAAACGATACAGCTATAGACGGACAGATTGA 50
BSNT_02472___ 51 AGAAACAACGGCATGGAAAGATTTTCTGTCCCTTATTAAAATAGGGATCG 100
|||.||.|||||||||||.|||||.||.||.||||||||||||||.||||
RBAM_014740__ 51 AGAGACGACGGCATGGAAGGATTTCCTTTCGCTTATTAAAATAGGAATCG 100
BSNT_02472___ 101 TCAATTCTAACCTCATCACGACTTTCACTGGAATGTGGCTTGCACTGCAT 150
|||||||.||..|.||.||||||||.||.||.|||||||||||..|.|||
RBAM_014740__ 101 TCAATTCGAATTTAATTACGACTTTTACCGGCATGTGGCTTGCGTTACAT 150
BSNT_02472___ 151 ATATCCGGTTTAAGTTTTTTAGGCAATATAAACACCGTTCTTCTTACGTT 200
|||||||||.|.|||||||||||||||.||||||||||.||||||||.||
RBAM_014740__ 151 ATATCCGGTCTGAGTTTTTTAGGCAATTTAAACACCGTGCTTCTTACATT 200
BSNT_02472___ 201 AATCGGGTCTTCACTGATTATTGCGGGCTCCTGCGCGATCAATAACTGGT 250
|||.||.|||||..||||.||.||.||.||.||.|||.|.||.||||..|
RBAM_014740__ 201 AATAGGATCTTCTTTGATCATCGCCGGTTCTTGTGCGGTTAACAACTATT 250
BSNT_02472___ 251 ATGACCGGGACATTGACCATCTTATGGAGCGTACGAAAGTAAGACCGACG 300
|.|||||.||.|||||.|||.|.|||||.||.||||||||||||||||||
RBAM_014740__ 251 ACGACCGTGATATTGATCATTTAATGGAACGCACGAAAGTAAGACCGACG 300
BSNT_02472___ 301 GTTACGGGTAAAATTCAGCCGAGTCAGGCGTTATGGTCTGGAATTTTGCT 350
||.||.||.||.||||||||||.|||.|||.|.|||||.||||||||.||
RBAM_014740__ 301 GTAACCGGAAAGATTCAGCCGAATCAAGCGCTGTGGTCAGGAATTTTACT 350
BSNT_02472___ 351 GGTTGCTTTAGGATTGATCATGCTGCTGATGACAACTGTCATGGCTGCTG 400
..|||||||||||.|.||||||||..|||||||.||.||.|||||.||.|
RBAM_014740__ 351 CATTGCTTTAGGACTTATCATGCTTTTGATGACCACCGTGATGGCAGCAG 400
BSNT_02472___ 401 TTATCGGTTTTATCGGAGTCTTTACGTATGTTGTATTGTACACAATGTGG 450
|.||||||||||||||.||.||||||||.|||||..|.||.|||||||||
RBAM_014740__ 401 TCATCGGTTTTATCGGCGTGTTTACGTACGTTGTTCTTTATACAATGTGG 450
BSNT_02472___ 451 ACGAAACGCCGCTATACGATTAACACAGTAGTAGGAAGCGTTTCCGGTGC 500
||.||||||||.|||||||||||.||.||.||.|||||.||.||.||.||
RBAM_014740__ 451 ACCAAACGCCGTTATACGATTAATACGGTTGTCGGAAGTGTATCAGGCGC 500
BSNT_02472___ 501 AGTGCCGCCGCTTATTGGATGGACGGCAGTGGAAGGGAATATCGGTGTCG 550
.|||||||||.|.||.||.|||||.||.||.||||||.|.||||||||.|
RBAM_014740__ 501 CGTGCCGCCGTTAATCGGCTGGACAGCGGTTGAAGGGCACATCGGTGTTG 550
BSNT_02472___ 551 TAGCATGGGTGTTATTCATGATTTTATTTATTTGGCAGATTCCTCACTTC 600
|.||.|||||.|||||||||||||||||.||.|||||||||||.|||||.
RBAM_014740__ 551 TCGCGTGGGTTTTATTCATGATTTTATTCATCTGGCAGATTCCGCACTTT 600
BSNT_02472___ 601 TTAGCATTGGCTATTAAGAAAACAGAGGATTACAGAGCTGCAAATATTCC 650
|||||..|.||.|||||.||.||.||.|||||||||||.||.||||||||
RBAM_014740__ 601 TTAGCGCTTGCGATTAAAAAGACGGAAGATTACAGAGCAGCGAATATTCC 650
BSNT_02472___ 651 GATGCTTCCTGTCGTATACGGATTTGAAGTGACAAAAAGACAAATTATTG 700
|||||||||.||.||..||||.|||||||||||.||||||||.|||||.|
RBAM_014740__ 651 GATGCTTCCGGTAGTGCACGGCTTTGAAGTGACGAAAAGACAGATTATCG 700
BSNT_02472___ 701 TGTGGGTTGCGTGCCTGATGCCGCTTCCGTTTTTCCTTGGTAGCCTGGGT 750
|.|||||.||.||||||.|||||||.|||||||||||.||.||.||.|||
RBAM_014740__ 701 TCTGGGTCGCATGCCTGCTGCCGCTGCCGTTTTTCCTCGGCAGTCTCGGT 750
BSNT_02472___ 751 CTTCCGATTGTGATTCTCGGC---TTGCTGTTAAATATCGGCTGGCTGAT 797
||||||||.||.||||||||| |||||| |||.||||.|||||..|
RBAM_014740__ 751 CTTCCGATCGTCATTCTCGGCACTTTGCTG---AATGTCGGATGGCTTGT 797
BSNT_02472___ 798 TCTTGGCTTAATGGGATTCCGCTCCAAGAATATCATGAAGTGGGCAACAC 847
|||.||..|.||||||||||||...||.||.|||||||||||||||||.|
RBAM_014740__ 798 TCTCGGACTGATGGGATTCCGCATGAAAAACATCATGAAGTGGGCAACTC 847
BSNT_02472___ 848 AAATGTTCGTTTACTCGCTTAACTACATGACAATCTATTTCGTTGCCATG 897
..|||||.||.||.||||||||.||||||||.||.|||||.||.||.|||
RBAM_014740__ 848 TTATGTTTGTCTATTCGCTTAATTACATGACCATTTATTTTGTAGCGATG 897
BSNT_02472___ 898 GTTGTCTTGACGCTTTTCTAA 918
||.|||||.|||||.||.|||
RBAM_014740__ 898 GTGGTCTTCACGCTGTTTTAA 918
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.