Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02466 and RBAM_014700

See Amino acid alignment / Visit BSNT_02466 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:12
# Commandline: needle
#    -asequence dna-align/BSNT_02466___ylaN.1.9828.seq
#    -bsequence dna-align/RBAM_014700___ylaN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02466___ylaN-RBAM_014700___ylaN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02466___ylaN-RBAM_014700___ylaN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02466___ylaN
# 2: RBAM_014700___ylaN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     246/282 (87.2%)
# Similarity:   246/282 (87.2%)
# Gaps:           0/282 ( 0.0%)
# Score: 1086.0
# 
#
#=======================================

BSNT_02466___      1 TTGGCTTCAGAGATGATAGTTGACCATCGGCAAAAAGCTTTTGAACTCTT     50
                     ||||||||||||||.|||||||||||||.|||.|||||.||.||.||.||
RBAM_014700__      1 TTGGCTTCAGAGATTATAGTTGACCATCAGCAGAAAGCATTCGAGCTGTT     50

BSNT_02466___     51 AAAAGTGGACGCTGAGAAGATTTTGAAGCTGATCCGAGTACAAATGGATA    100
                     .||..|.||.||||||||||||||||||||||||||||||||||||||||
RBAM_014700__     51 GAAGTTAGATGCTGAGAAGATTTTGAAGCTGATCCGAGTACAAATGGATA    100

BSNT_02466___    101 ACTTAACGATGCCTCAATGTCCTCTATATGAAGAGGTTTTAGATACTCAA    150
                     |||||||||||||||||||||||||.|||||||||||.||.||||||||.
RBAM_014700__    101 ACTTAACGATGCCTCAATGTCCTCTGTATGAAGAGGTCTTGGATACTCAG    150

BSNT_02466___    151 ATGTTCGGGCTTTCGAGGGAAATCGATTTTGCTGTCCGCCTGGGATTGGT    200
                     ||||||||.||.|||||||||||||||||||||||||||||||||||.||
RBAM_014700__    151 ATGTTCGGACTGTCGAGGGAAATCGATTTTGCTGTCCGCCTGGGATTAGT    200

BSNT_02466___    201 TGATGAAAAAGACGGTAAAGACCTTTTATACACATTGGAACGCGAATTGT    250
                     |||.|||||.|||||.|||||.||..|..|||.|.|.|||.|.|||.|||
RBAM_014700__    201 TGACGAAAACGACGGCAAAGAGCTGCTGGACAGACTTGAAAGAGAACTGT    250

BSNT_02466___    251 CTGCTTTACATGACGCGTTTACAGCTAAATAA    282
                     |||||||.||||||||||||||||..||||||
RBAM_014700__    251 CTGCTTTGCATGACGCGTTTACAGGAAAATAA    282


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