Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02442 and RBAM_014530

See Amino acid alignment / Visit BSNT_02442 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:10
# Commandline: needle
#    -asequence dna-align/BSNT_02442___yktC.1.9828.seq
#    -bsequence dna-align/RBAM_014530___suhB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02442___yktC-RBAM_014530___suhB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02442___yktC-RBAM_014530___suhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02442___yktC
# 2: RBAM_014530___suhB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 801
# Identity:     638/801 (79.7%)
# Similarity:   638/801 (79.7%)
# Gaps:           6/801 ( 0.7%)
# Score: 2540.0
# 
#
#=======================================

BSNT_02442___      1 ATGACAAATTGGACGGAAATTGATGAGATTGCAAAGAAATGGATAAGAGA     50
                     ||||||||||||||||||||||||||.||.|||||..|||||.|||.|||
RBAM_014530__      1 ATGACAAATTGGACGGAAATTGATGATATCGCAAAACAATGGGTAAAAGA     50

BSNT_02442___     51 AGCAGGCGCGAGAATTAAACAATCCATGCATGAAAGCCTGACAATTGAAA    100
                     |||.||..|||||||.|.||||||||||||.||||||.||||.|||||||
RBAM_014530__     51 AGCCGGAACGAGAATCAGACAATCCATGCAGGAAAGCTTGACGATTGAAA    100

BSNT_02442___    101 CGAAATCAAATCCGAATGATTTAGTCACCAATATTGACAAAGAAACCGAA    150
                     |.||||||||||||||||||||||||||.||||||||.|||||.||.||.
RBAM_014530__    101 CAAAATCAAATCCGAATGATTTAGTCACAAATATTGATAAAGAGACGGAG    150

BSNT_02442___    151 AAGTTTTTCATTGATCGAATTCAAGAAACATTTCCGGGACATCGGATACT    200
                     ...|||||||||||.||.||.||.|.|||.|||||.|||||.|||||.||
RBAM_014530__    151 CGCTTTTTCATTGACCGTATACAGGGAACTTTTCCCGGACACCGGATTCT    200

BSNT_02442___    201 CGGTGAAGAGGGGCAAGGAGACAAAATCCACTCACTTGAGGGAGTCGTAT    250
                     |||.|||||.|||||.|||||.||..|||.|||.|||||.|||.||||.|
RBAM_014530__    201 CGGAGAAGAAGGGCAGGGAGATAAGCTCCGCTCCCTTGACGGAATCGTCT    250

BSNT_02442___    251 GGATTATTGATCCAATTGATGGGACGATGAATTTTGTGCACCAGCAAA--    298
                     ||||.||||||||.|||||.||.||||||||||||||   |||.||||  
RBAM_014530__    251 GGATCATTGATCCGATTGACGGAACGATGAATTTTGT---CCATCAAAAG    297

BSNT_02442___    299 -GAAATTTTGCGATTTCCATTGGGATTTTTGAAAACGGTGAAGGGAAAAT    347
                      |..||||.|||||.|||||.||.||.||||||.||||..||||.|||||
RBAM_014530__    298 CGGCATTTCGCGATCTCCATCGGCATCTTTGAAGACGGAAAAGGCAAAAT    347

BSNT_02442___    348 CGGTTTAATTTATGATGTGGTGCACGATGAGCTGTATCACGCATTTAGCG    397
                     |||.|||||||||||||||.||||.||.||||||||||||||.||.||||
RBAM_014530__    348 CGGCTTAATTTATGATGTGATGCAGGACGAGCTGTATCACGCCTTCAGCG    397

BSNT_02442___    398 GCAGAGGGGCTTATATGAATGAAACGAAGCTGGCTCCTTTAAAAGAAACC    447
                     |.|.||||||||||.||||.||.|||..|||.|||||||||||||||.|.
RBAM_014530__    398 GAAAAGGGGCTTATCTGAACGACACGCCGCTTGCTCCTTTAAAAGAAGCT    447

BSNT_02442___    448 GTCATTGAAGAAGCGATTCTTGCCATTAATGCAACATGGGTAACGGAAAA    497
                     ..||||||||||||.|||.||||.||.|||||.||||||||.||||||||
RBAM_014530__    448 TCCATTGAAGAAGCCATTATTGCAATCAATGCCACATGGGTGACGGAAAA    497

BSNT_02442___    498 CAGAAGAATTGATCAAAGTGTGTTAGCGCCACTTGTGAAAAGAGTCAGAG    547
                     ||||||.|||||.|..|||.|.||.|||||.||.||.|||.|.|||||||
RBAM_014530__    498 CAGAAGGATTGACCCGAGTATTTTGGCGCCGCTCGTAAAACGGGTCAGAG    547

BSNT_02442___    548 GCACACGCTCATACGGTTCTGCCGCTTTAGAGCTGGCAAATGTCGCGGCA    597
                     |.||.||.||.|||||.||.||.||..|.|||||.||.|.|||.|||.|.
RBAM_014530__    548 GAACGCGTTCCTACGGCTCGGCGGCACTTGAGCTCGCCAGTGTTGCGACC    597

BSNT_02442___    598 GGAAGAATAGATGCTTACATCACGATGCGCCTTGCGCCATGGGACTACGC    647
                     ||..|.||.||.||.|||||.||||||.|.||.|||||.|||||.|||||
RBAM_014530__    598 GGCCGCATTGACGCATACATTACGATGAGGCTCGCGCCGTGGGATTACGC    647

BSNT_02442___    648 AGCCGGCTGTGTGCTGTTAAATGAAGTAGGAGGCATCTATACGACCATTG    697
                     .||||||||.||||||.|.||.|||||.||.|||||.||.|||||||..|
RBAM_014530__    648 TGCCGGCTGCGTGCTGCTGAACGAAGTCGGGGGCATTTACACGACCACAG    697

BSNT_02442___    698 AAGGAGAGCCGTTTACCTTTTTAGAAAACCACAGTGTGCTAGCCGGAAAC    747
                     |.||.||.||||||||.||||||||.||||||||.|||||.||.||.||.
RBAM_014530__    698 ACGGCGAACCGTTTACGTTTTTAGACAACCACAGCGTGCTTGCGGGCAAT    747

BSNT_02442___    748 CCATCTATACATAAAACGATATTTGAAGAGTATCTTCATGCTGGGAAGTA    797
                     ||..|.||||||||||..||.|||||.||.|||.|.|||||||..|.|||
RBAM_014530__    748 CCGGCAATACATAAAATTATCTTTGACGACTATTTACATGCTGACAGGTA    797

BSNT_02442___    798 G    798
                     |
RBAM_014530__    798 G    798


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