Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02438 and RBAM_014510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence dna-align/BSNT_02438___yktB.1.9828.seq
# -bsequence dna-align/RBAM_014510___yktB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02438___yktB-RBAM_014510___yktB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02438___yktB-RBAM_014510___yktB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02438___yktB
# 2: RBAM_014510___yktB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 645
# Identity: 489/645 (75.8%)
# Similarity: 489/645 (75.8%)
# Gaps: 18/645 ( 2.8%)
# Score: 1811.0
#
#
#=======================================
BSNT_02438___ 1 ATGACACAAATGCGTTTCACTGAAGAGGACTTTAACACATTTACAATAGA 50
|||||.||.||||||||.||..||||.|||||..|.||||||||||||||
RBAM_014510__ 1 ATGACTCAGATGCGTTTTACAAAAGAAGACTTCGATACATTTACAATAGA 50
BSNT_02438___ 51 AGGCTTAGACGCGCGCATGGAAGTATTAAAAGAGAC-GGTCCGTCCGAAG 99
|||.|||||..||||||||||.||.|||||||| || .|||||.||||||
RBAM_014510__ 51 AGGTTTAGATCCGCGCATGGAGGTGTTAAAAGA-ACAAGTCCGCCCGAAG 99
BSNT_02438___ 100 CTTACAGCT--CTAGGCGAACATTTTGCCCCAACTTTATCAGCTTTAACC 147
||.|| || .||||.||.|||||.||.||.||.||.|||||.||.||.
RBAM_014510__ 100 CTGAC--CTTGTTAGGAGAGCATTTCGCACCGACATTGTCAGCATTGACA 147
BSNT_02438___ 148 GGAGATGAAATGTTTCCGCATGTGGCAAAGCATGCAAGAAGATCCGTCAA 197
||.|||||||||||.||||||||.||.|||||.||.||||||||.|||||
RBAM_014510__ 148 GGCGATGAAATGTTCCCGCATGTCGCCAAGCACGCGAGAAGATCTGTCAA 197
BSNT_02438___ 198 TCCCCCTGCTGACAGCTGGGTGGCGTTCGCAAACAGCAAAAGAGGCTATA 247
.||.||.||||||||||||||.||.||.||.|||||||||.|.||.||||
RBAM_014510__ 198 CCCGCCGGCTGACAGCTGGGTTGCCTTTGCCAACAGCAAACGCGGGTATA 247
BSNT_02438___ 248 AAAAACTGCCACATTTCCAAATTGGTTTATGGGAAAGCCACGTCTTTGTG 297
|.|||||.||.||.||.||.||.|||||||||||.|.|||..|.|||||.
RBAM_014510__ 248 AGAAACTCCCTCACTTTCAGATCGGTTTATGGGACACCCATATGTTTGTA 297
BSNT_02438___ 298 TGGTTCGCGATTATTTATGAATCCCCTATCAAAGAAGAATACGGCAAATT 347
|||||.||.||.|||||||||||.||.||.|||||.||||||||||.|||
RBAM_014510__ 298 TGGTTTGCCATCATTTATGAATCTCCGATAAAAGAGGAATACGGCAGATT 347
BSNT_02438___ 348 GCTTGAAATGAACCAAGAAACCATTACGAAAAATA-TCCCTGACAGCTTC 396
|||.|||..|||.||.||...|||.||.|||.|.| ||||.|.|| .||.
RBAM_014510__ 348 GCTGGAAGCGAAGCAGGAGGACATCACAAAACAGATTCCCGGTCA-TTTT 396
BSNT_02438___ 397 GTTTGGTCTGCAGATCACACAAAACC--GGGAGTACATAAACAGTCTGAA 444
||.|||||..|.|||||.||.||.|| |||.|||| ||.|||||.||.
RBAM_014510__ 397 GTATGGTCGCCGGATCATACGAAGCCAGGGGCGTAC--AAGCAGTCCGAC 444
BSNT_02438___ 445 ATGGACAAGGAACAGCTGAAGACACTGTTTGAGCGTTTGCAGACTGTAAA 494
|||||..||||.||||||||.|||.|.|||||.||..|||||||.||.||
RBAM_014510__ 445 ATGGATCAGGAGCAGCTGAAAACATTATTTGAACGCCTGCAGACAGTGAA 494
BSNT_02438___ 495 GAAAGCTGAGCTGTTATGCGGCATCCAGCTCCAAAAAGAAGAAGTGCTGA 544
.|||||.|||||.||.||||||||.|||||.|||||||||||.|||.|.|
RBAM_014510__ 495 AAAAGCAGAGCTTTTGTGCGGCATTCAGCTGCAAAAAGAAGACGTGATCA 544
BSNT_02438___ 545 ATATGAATAACCAGGAATTCCTTCAGCGTATCGACGATGCCTTTAAGCAG 594
|||||||.|||.|.||||||||.||....||.||.|||||.||||.|.||
RBAM_014510__ 545 ATATGAACAACAATGAATTCCTGCAAACCATTGAAGATGCTTTTAGGAAG 594
BSNT_02438___ 595 CTTGCTTTTCTGTACCGCCTCACCCAAAAAGTATCACAAGCATAA 639
|||.|.|||.|.|||...||.||.||.|||||.|||.||
RBAM_014510__ 595 CTTTCCTTTTTATACACACTGACTCAGAAAGTCTCATAA------ 633
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