Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02436 and RBAM_014490
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence dna-align/BSNT_02436___speA.1.9828.seq
# -bsequence dna-align/RBAM_014490___speA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02436___speA-RBAM_014490___speA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02436___speA-RBAM_014490___speA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02436___speA
# 2: RBAM_014490___speA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1485
# Identity: 1160/1485 (78.1%)
# Similarity: 1160/1485 (78.1%)
# Gaps: 24/1485 ( 1.6%)
# Score: 4508.0
#
#
#=======================================
BSNT_02436___ 1 TTGTCGCAACATGAAACACCCTTATACACAGGACTGAAAAAGCATGCAAG 50
|||.|||||||||||||||||.|.||||..||||||||||||||.||...
RBAM_014490__ 1 TTGCCGCAACATGAAACACCCCTGTACAGCGGACTGAAAAAGCACGCGGA 50
BSNT_02436___ 51 CAGACAGCCTGTTCAATTCCACATTCCCGGCCATAAAAAAGGGGCAGGAA 100
||||||||||||.||||||||||||||.||||||||||||||.||.||||
RBAM_014490__ 51 CAGACAGCCTGTCCAATTCCACATTCCGGGCCATAAAAAAGGCGCGGGAA 100
BSNT_02436___ 101 TGGACCCAGAATTCAGACAATTTATCGGTGAAAACGCGTTAAGCATAGAT 150
||||.||.||||||||||||||||||||.|||||||||||||||||||||
RBAM_014490__ 101 TGGATCCGGAATTCAGACAATTTATCGGAGAAAACGCGTTAAGCATAGAT 150
BSNT_02436___ 151 TTAATTAATATTGAACCATTAGACGATCTGCACGCGCCAAAAGGCATTAT 200
|||||||||||.|||||..|.||.|||.|.||.||||||||.|||||.||
RBAM_014490__ 151 TTAATTAATATCGAACCCCTGGATGATTTACATGCGCCAAAGGGCATCAT 200
BSNT_02436___ 201 TAAACAAGCACAAGATCTGGCTGCTGAAGCATTTGGAGCGGATCATACAT 250
||||.||||.||.||||||||.|||..||||||.||.||.||.|||||.|
RBAM_014490__ 201 TAAAGAAGCCCAGGATCTGGCCGCTCGAGCATTCGGTGCAGACCATACCT 250
BSNT_02436___ 251 TTTTTTCTGTTCAAGGAACAAGCGGCGCCATTATGACAATGGTAATGGCT 300
|.|||||.||.|||||.||.|||||||||||||||||.|||||.||||||
RBAM_014490__ 251 TCTTTTCCGTACAAGGGACGAGCGGCGCCATTATGACGATGGTCATGGCT 300
BSNT_02436___ 301 GTTTGCGGACCTGGTGATAAAATTATTATTCCAAGAAATGTTCATAAATC 350
||.||||||||.||.||||||||.||.||.||.|||||.|||||||||||
RBAM_014490__ 301 GTATGCGGACCCGGAGATAAAATCATCATCCCGAGAAACGTTCATAAATC 350
BSNT_02436___ 351 AATTATGACAGCTATTGTATTTTCCGGAGCGGTTCCAATTTTTATTCATC 400
.||||||.|.||.||||||||||||||||||||.||.|||||||||||.|
RBAM_014490__ 351 CATTATGTCGGCCATTGTATTTTCCGGAGCGGTGCCGATTTTTATTCACC 400
BSNT_02436___ 401 CTGAAATTGACAATGAATTGGGCATCTCCCACGGCATTACACTTGAATCT 450
|.|||||||||.||||..|.||.||.||.|||||||||||.|||||.||.
RBAM_014490__ 401 CGGAAATTGACGATGAGCTCGGAATTTCTCACGGCATTACGCTTGAGTCC 450
BSNT_02436___ 451 GCTAAACGGGCGCTTACCGAACATCCGGATGCAAAAGGGCTTCTCGTCAT 500
||..|.|||||..|.||.||.||.||.||.||||||||.||.||.|||||
RBAM_014490__ 451 GCCGAGCGGGCTTTGACGGAGCACCCTGACGCAAAAGGCCTGCTTGTCAT 500
BSNT_02436___ 501 CAACCCGACATATTTCGGTGTTGCAGCCGACTTAAAAAGCATCGTAGAAC 550
.||.|||||.||.||||||||.|||||.|||||.|..|||||.|||.|.|
RBAM_014490__ 501 AAATCCGACGTACTTCGGTGTGGCAGCTGACTTGAGCAGCATTGTAAAGC 550
BSNT_02436___ 551 TCGCTCATTCGTTTGATGTGCCAGTGCTTGTCGATGAAGCACACGGCGTT 600
||||.|||||.||.||||||||.|||||||||||||||||.||||||||.
RBAM_014490__ 551 TCGCGCATTCTTTCGATGTGCCTGTGCTTGTCGATGAAGCGCACGGCGTG 600
BSNT_02436___ 601 CACATTCATTTTCACGACGAATTGCCGCTATCGGCTATGCAGGCAGGAGC 650
||.|||||||||||.||..|..|.||.||.||.||.||||||||.||.||
RBAM_014490__ 601 CATATTCATTTTCATGATAAGCTTCCTCTGTCCGCCATGCAGGCGGGCGC 650
BSNT_02436___ 651 GGACATAGCAGCGACAAGTGTACACAAGCTGGGCGGATCACTCACGCAAA 700
.||.||.|||||.||.||.||.|||||..||||.||.||.||.|||||.|
RBAM_014490__ 651 TGATATGGCAGCTACTAGCGTGCACAAATTGGGAGGCTCCCTGACGCAGA 700
BSNT_02436___ 701 GTTCGATTTTAAACATGAGAGAGGGCCTTGTATCAAAAGACAGAGTGCAA 750
|.||.||||||||..|||||||.||.|||||.||.|||||.|||||.||.
RBAM_014490__ 701 GCTCCATTTTAAATGTGAGAGAAGGTCTTGTTTCCAAAGAAAGAGTACAG 750
BSNT_02436___ 751 TCAATACTGAGCATGCTGACAACTACGTCAACTTCTTACTTGCTTCTTGC 800
||.||..|.|||||||||||.||.||||||||.||.||..|||||||.||
RBAM_014490__ 751 TCGATTTTAAGCATGCTGACGACAACGTCAACATCCTATCTGCTTCTCGC 800
BSNT_02436___ 801 TTCTTTGGATGTTGCCAGAAAACGCCTTGCAACAGAAGGCCACCAGCTTG 850
|||..|.|||||.||.|||||||||||.||.||||||||||...|.|||.
RBAM_014490__ 801 TTCACTTGATGTCGCAAGAAAACGCCTCGCTACAGAAGGCCGAGATCTTC 850
BSNT_02436___ 851 CTGAGGAAACACTAAAGCTTGCCAATCAGACGAGAGATCGCCTCAACCAG 900
.|||.||.||..|...|||.||..|||||||..|.||.||||||||.||.
RBAM_014490__ 851 TTGAAGATACGATTCTGCTGGCGGATCAGACACGGGAACGCCTCAATCAA 900
BSNT_02436___ 901 ATTGAAGGCATTTATTGTGTCGGTTCTGAGATTCTTGGGTCGAAAGCAGC 950
|||||||||||....||||||||....||.||....|||||.|||||.||
RBAM_014490__ 901 ATTGAAGGCATCCGCTGTGTCGGCGAAGAAATCACAGGGTCTAAAGCTGC 950
BSNT_02436___ 951 TTACAGCTATGATCCGACAAAATTGATTATCTCTGTGAAAAGTCTTGGCC 1000
.|.|||.|||||||||||.|||||.||.||.||.||.||||..||.||||
RBAM_014490__ 951 CTTCAGTTATGATCCGACTAAATTAATCATTTCGGTCAAAAACCTCGGCC 1000
BSNT_02436___ 1001 TGACAGGACATGACGTGGAAAAATGGCTTCGTGAATCCTTTAATATTGAG 1050
||||.||.||||||||.|||||||||||.||.|||||.|.||||||.||.
RBAM_014490__ 1001 TGACGGGTCATGACGTTGAAAAATGGCTCCGCGAATCATATAATATCGAA 1050
BSNT_02436___ 1051 GTTGAGCTTTCTGATCTGTACAATATTTTGTGTATTTTCACTCCTGGTGA 1100
||.|||||.||.|||.||||.||||||||.|||||||||||.||.||.||
RBAM_014490__ 1051 GTCGAGCTGTCCGATTTGTATAATATTTTATGTATTTTCACCCCCGGCGA 1100
BSNT_02436___ 1101 CAGCCAAAA-----TGATGCAGACCGGCTTGTAGAG---GCTTTAACTGA 1142
||| | .|||||.|||||.|||||| || |||| ||.||
RBAM_014490__ 1101 CAG-----AGCGGGAGATGCCGACCGTCTTGTA-AGCGCGCTT--ACAGA 1142
BSNT_02436___ 1143 GATCGCACAGCAAATGTCAGAACAA----GATGTAACACATCAGCAAACT 1188
.||..||.||||....||.| |||| .||| |.|||||||||||.
RBAM_014490__ 1143 CATTTCAAAGCAGGCTTCCG-ACAACGACTATG---CTCATCAGCAAACC 1188
BSNT_02436___ 1189 GAGGTTCTGCTTCCAGAAATACCTTTATTGGCAATGACTCCGCGTGATGC 1238
||.|||||||||||.||.||.|||.|.||.||.|||||.||..|.||.||
RBAM_014490__ 1189 GAAGTTCTGCTTCCTGAGATTCCTCTGTTAGCGATGACGCCAAGAGACGC 1238
BSNT_02436___ 1239 TTTCTATGCAAATACGGAAGTCATCCCATTAAAAGAAGCATCCGGACGGA 1288
.||.||.|||||||||||||||||.||.|||||||||.|..|.|||||||
RBAM_014490__ 1239 GTTTTACGCAAATACGGAAGTCATTCCGTTAAAAGAATCCGCGGGACGGA 1288
BSNT_02436___ 1289 TTATTGCTGAATTTGTCATGGTATATCCGCCTGGTATTCCAATCTTCATC 1338
|.||.||.||.|||||||||||.||.|||||.||.|||||.|||||.||.
RBAM_014490__ 1289 TCATCGCAGAGTTTGTCATGGTGTACCCGCCGGGAATTCCGATCTTTATT 1338
BSNT_02436___ 1339 CCAGGAGAAATTATTACAGAAGAAAACATCAGCTACATTTTTAAAAACCT 1388
||.||.||.||.|||||.||||||||.|||||||||||||||||||||.|
RBAM_014490__ 1339 CCGGGCGAGATCATTACTGAAGAAAATATCAGCTACATTTTTAAAAACTT 1388
BSNT_02436___ 1389 TGACGCAGGCCTCCCTGTTCAAGGACCTGAGGACTCGACTTTACATATGA 1438
.|||||.|||||.|||||.||.||.||.||.||..|.||..|..|.||||
RBAM_014490__ 1389 GGACGCCGGCCTTCCTGTGCAGGGTCCCGAAGATGCAACGCTTGAAATGA 1438
BSNT_02436___ 1439 TCCGAGTCATCAAAGAACAAAAAGCAATTCAATAA 1473
||.|||||||||||||.||||||||.||.||||||
RBAM_014490__ 1439 TCAGAGTCATCAAAGAGCAAAAAGCCATCCAATAA 1473
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