Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02434 and RBAM_014460
See
Amino acid alignment /
Visit
BSNT_02434 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence dna-align/BSNT_02434___slp.1.9828.seq
# -bsequence dna-align/RBAM_014460___slp.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02434___slp-RBAM_014460___slp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02434___slp-RBAM_014460___slp.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02434___slp
# 2: RBAM_014460___slp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity: 277/384 (72.1%)
# Similarity: 277/384 (72.1%)
# Gaps: 18/384 ( 4.7%)
# Score: 991.5
#
#
#=======================================
BSNT_02434___ 1 ATGCGATATCGCGCGGT-ATTCCC--------CATGCTGATAATAGTATT 41
|||||.||.||..|||| |||||| .|||||| ||
RBAM_014460__ 1 ATGCGCTACCGTACGGTGATTCCCTTTTTTTTGATGCTG---------TT 41
BSNT_02434___ 42 TGCTTTATCGGGCTGTACGCTTTCCACCATCAATCCGATGAAAAAAAGCC 91
.|.|.|.||..|||||.||.||||.||..|||.|||..|.|.|||||.||
RBAM_014460__ 42 CGTTCTGTCAAGCTGTTCGGTTTCTACTGTCAGTCCATTCACAAAAAACC 91
BSNT_02434___ 92 GGATTGACAACATTCATCATACACAAATCCTGTTTTTTTCTGATGAGAAC 141
||||.||||.|||||||||.||.||||||.||||||||||.|||||.||.
RBAM_014460__ 92 GGATCGACAGCATTCATCACACTCAAATCTTGTTTTTTTCCGATGAAAAT 141
BSNT_02434___ 142 CAAATAGACCAGGAAGCGCCTTATTACGATGCACTGCTTGATTTAGAAAA 191
||.|||||..|.||||.|||||||||||||||..|.||||||||||||||
RBAM_014460__ 142 CATATAGATAAAGAAGTGCCTTATTACGATGCGATCCTTGATTTAGAAAA 191
BSNT_02434___ 192 AGATTATCCCGAGCAAATAGATAAAATGAAGGTCTATGATAAAAAAGAAG 241
..|.||||||.|.||..|.|||.||||||||||.|||||.||.|.|.|.|
RBAM_014460__ 192 GAAATATCCCCATCATGTCGATCAAATGAAGGTTTATGACAACAGAAAGG 241
BSNT_02434___ 242 GCTGGGAAGATGAGATTGAAACTGTCCCTACCCTTATGGTTGTTGATCAG 291
|.||||||||.||.||..|.||..|||||.|.||.|||||..|..||||.
RBAM_014460__ 242 GATGGGAAGAGGAAATCAACACGTTCCCTGCGCTGATGGTGATCAATCAT 291
BSNT_02434___ 292 CGCCATGTCGTGGTGAAAATCGAGGGATGTGTGAAAAAGAAAGAAGACAT 341
||.|||||.||..||||.||.|||||||..||.||.||.|||||.||.||
RBAM_014460__ 292 CGGCATGTGGTCATGAAGATTGAGGGATCCGTAAAGAAAAAAGAGGATAT 341
BSNT_02434___ 342 CATTAAACCATTACAGCATGTGCTGTCAAAATAA 375
|||.|||||..|.|||||||||||..||.|||||
RBAM_014460__ 342 CATCAAACCTATGCAGCATGTGCTTGCACAATAA 375
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.