Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02431 and RBAM_014430
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:09
# Commandline: needle
# -asequence dna-align/BSNT_02431___pdhB.1.9828.seq
# -bsequence dna-align/RBAM_014430___pdhB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02431___pdhB-RBAM_014430___pdhB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02431___pdhB-RBAM_014430___pdhB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02431___pdhB
# 2: RBAM_014430___pdhB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 978
# Identity: 843/978 (86.2%)
# Similarity: 843/978 (86.2%)
# Gaps: 0/978 ( 0.0%)
# Score: 3675.0
#
#
#=======================================
BSNT_02431___ 1 ATGGCGCAAATGACAATGATTCAAGCAATCACGGATGCGTTACGCACAGA 50
||||||||||||||||||||||||||.|||||.|||||||||||||||||
RBAM_014430__ 1 ATGGCGCAAATGACAATGATTCAAGCGATCACTGATGCGTTACGCACAGA 50
BSNT_02431___ 51 ACTGAAAAATGACGAAAATGTCTTAGTTTTCGGAGAAGACGTTGGTGTAA 100
|||||||||..|.|||||.||..|..|||||||.|||||.||.||.||..
RBAM_014430__ 51 ACTGAAAAACAATGAAAACGTTCTGCTTTTCGGGGAAGATGTAGGCGTTG 100
BSNT_02431___ 101 ACGGCGGCGTATTCCGTGCGACAGAAGGATTGCAAAAAGAATTCGGTGAA 150
.|||.||||||||||||||.||.|||||..|.|||||||||||||||||.
RBAM_014430__ 101 CCGGAGGCGTATTCCGTGCAACTGAAGGCCTTCAAAAAGAATTCGGTGAG 150
BSNT_02431___ 151 GACCGTGTGTTTGACACGCCACTTGCTGAATCTGGTATCGGCGGTCTTGC 200
|||||.||.|||||||||||.|||||||||||.||||||||||||||.||
RBAM_014430__ 151 GACCGCGTATTTGACACGCCGCTTGCTGAATCCGGTATCGGCGGTCTCGC 200
BSNT_02431___ 201 CCTTGGTTTAGGCTTAAACGGCTTCCGTCCGGTAATGGAAATCCAATTCT 250
.||.|||||||||.|..|.|..|.||||||.||.||||||||||||||||
RBAM_014430__ 201 TCTCGGTTTAGGCCTGCAAGATTACCGTCCTGTTATGGAAATCCAATTCT 250
BSNT_02431___ 251 TCGGATTTGTCTATGAAGTAATGGATTCAGTTTCTGGCCAAATGGCTCGT 300
|||||||.||.||||||||||||||||||.|.||.||.||||||||||||
RBAM_014430__ 251 TCGGATTCGTATATGAAGTAATGGATTCAATCTCAGGACAAATGGCTCGT 300
BSNT_02431___ 301 ATGCGCTACCGTTCTGGCGGACGCTGGACTTCACCTGTAACAATTCGTTC 350
.|.|||||||||||.|||||||||||||||||.||.||.|||||.|||||
RBAM_014430__ 301 CTCCGCTACCGTTCCGGCGGACGCTGGACTTCTCCGGTGACAATCCGTTC 350
BSNT_02431___ 351 TCCATTCGGCGGCGGTGTTCATACTCCTGAACTTCACGCTGACAGCTTGG 400
||||||||||||.||.||||||||.||||||||||||||||||||.||||
RBAM_014430__ 351 TCCATTCGGCGGAGGGGTTCATACACCTGAACTTCACGCTGACAGTTTGG 400
BSNT_02431___ 401 AAGGTCTTGTTGCACAACAGCCTGGTATCAAAGTTGTGATTCCATCAACT 450
||||.|||.|.||.||.|||||.|||||.||||||||.||.||.||.|||
RBAM_014430__ 401 AAGGCCTTATCGCTCAGCAGCCGGGTATTAAAGTTGTTATCCCTTCCACT 450
BSNT_02431___ 451 CCTTACGATGCCAAAGGACTTTTAATTTCTGCGATCAGAGACAATGATCC 500
|||||||||||.||||||||..|.|||.|..|.|||||||||||||||||
RBAM_014430__ 451 CCTTACGATGCAAAAGGACTGCTGATTGCCTCTATCAGAGACAATGATCC 500
BSNT_02431___ 501 TGTTGTCTTCTTAGAGCATATGAAGCTTTACCGTTCTTTCCGTCAGGAAG 550
.|||||.|||||||||||||||||.|||||||||||||||||||||||||
RBAM_014430__ 501 GGTTGTTTTCTTAGAGCATATGAAACTTTACCGTTCTTTCCGTCAGGAAG 550
BSNT_02431___ 551 TTCCTGAAGAAGAATACACAATTGAGCTTGGAAAAGCTGACGTGAAACGT 600
|||||||.||.||||||||||||||||||||.||||||||.||||||||.
RBAM_014430__ 551 TTCCTGAGGAGGAATACACAATTGAGCTTGGCAAAGCTGATGTGAAACGC 600
BSNT_02431___ 601 GAAGGTACTGATCTTTCAATCATTACTTACGGCGCAATGGTTCATGAATC 650
|||||||||||.|||||.|||||.||.||||||||.|||||||||||.||
RBAM_014430__ 601 GAAGGTACTGACCTTTCTATCATCACATACGGCGCGATGGTTCATGAGTC 650
BSNT_02431___ 651 ATTAAAAGCTGCTGAGGAGCTTGAAAAAGACGGCATTTCTGCTGAAGTTG 700
..|.||.||||||||.||||||||||||||.|||.||||||||||||||.
RBAM_014430__ 651 GCTTAAGGCTGCTGAAGAGCTTGAAAAAGAAGGCGTTTCTGCTGAAGTTA 700
BSNT_02431___ 701 TCGACCTTCGTACAGTAAGCCCACTTGATATCGATACAATCATCGCTTCT 750
||||||||||.||.|||||.||.||||||||.|||||.||.||.||||||
RBAM_014430__ 701 TCGACCTTCGCACTGTAAGTCCGCTTGATATTGATACGATTATTGCTTCT 750
BSNT_02431___ 751 GTAGAAAAAACAGGACGCGCGATTGTCGTTCAAGAGGCACAAAAACAAGC 800
||.|||||||||||.|||||.||||||||.|||||.||.|||||||||||
RBAM_014430__ 751 GTTGAAAAAACAGGCCGCGCAATTGTCGTGCAAGAAGCTCAAAAACAAGC 800
BSNT_02431___ 801 CGGTATTGCTGCAAACGTAGTAGCAGAAATTAATGACCGTGCGATCCTGA 850
|||.||.|||||.|||||.|||||.||||||||||||||.|||||.||||
RBAM_014430__ 801 CGGCATCGCTGCCAACGTTGTAGCTGAAATTAATGACCGCGCGATTCTGA 850
BSNT_02431___ 851 GCTTGGAAGCACCTGTACTTCGCGTTGCAGCGCCAGATACAGTATTTCCT 900
||.|||||||.||.||.||.||.|||||.|||||.|||||||||||||||
RBAM_014430__ 851 GCCTGGAAGCTCCGGTTCTGCGTGTTGCGGCGCCTGATACAGTATTTCCT 900
BSNT_02431___ 901 TTCTCTCAAGCGGAGAGCGTATGGCTTCCAAACCATAAAGACGTTCTTGA 950
|||||.|..||.||||||||||||||||||||||||||||||||||||||
RBAM_014430__ 901 TTCTCGCTTGCTGAGAGCGTATGGCTTCCAAACCATAAAGACGTTCTTGA 950
BSNT_02431___ 951 AACAGCAAGAAAAGTACTTGAATTTTAA 978
|||.||.|.||||||.||||||||||||
RBAM_014430__ 951 AACTGCGAAAAAAGTTCTTGAATTTTAA 978
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