Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02416 and RBAM_014250
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:08
# Commandline: needle
# -asequence dna-align/BSNT_02416___ykqB.1.9828.seq
# -bsequence dna-align/RBAM_014250___ykqB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02416___ykqB-RBAM_014250___ykqB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02416___ykqB-RBAM_014250___ykqB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02416___ykqB
# 2: RBAM_014250___ykqB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 668
# Identity: 535/668 (80.1%)
# Similarity: 535/668 (80.1%)
# Gaps: 4/668 ( 0.6%)
# Score: 2129.0
#
#
#=======================================
BSNT_02416___ 1 ATGAAAAAAGAATTTGCGGTAATTGGGCTGGGCCGTTTTGGTGGCAGTAT 50
||||.||||||.|||||.||.||.||.||.||.||.||.||.||.|||||
RBAM_014250__ 1 ATGAGAAAAGAGTTTGCCGTTATCGGTCTCGGACGCTTCGGCGGAAGTAT 50
BSNT_02416___ 51 TTGCAAAGCATTAAGCGAAGAAGGCGTCGAGGTTATGGCAATGGATATCG 100
|||||||||||||||.|||||||||.|.|||||.|||||.||||||||.|
RBAM_014250__ 51 TTGCAAAGCATTAAGTGAAGAAGGCCTTGAGGTCATGGCGATGGATATTG 100
BSNT_02416___ 101 ATGAAGATAAAGTCAACGAGTATGCCAAGATTGCATCTCACGCAGTTATC 150
|||||||||||||.||.||.||.|||||.||.|||||.|||||.||.|||
RBAM_014250__ 101 ATGAAGATAAAGTAAATGAATACGCCAAAATCGCATCACACGCGGTCATC 150
BSNT_02416___ 151 GGTGATTCGACAGACGAATCTGTCCTGAAAAATTTAGGCCTGCGAAATTT 200
||.|||||.||.||.|||||.||.||||||||.|||||.|||||.||.||
RBAM_014250__ 151 GGCGATTCAACCGATGAATCGGTGCTGAAAAACTTAGGGCTGCGCAACTT 200
BSNT_02416___ 201 TGACCACGTTATTGTAGCAATCGGGGAAAATATTCAAGCGAGTATTTTAA 250
|||||||||.|||||.||||||||.||||||||.||.|||||.|||||||
RBAM_014250__ 201 TGACCACGTCATTGTGGCAATCGGCGAAAATATACAGGCGAGCATTTTAA 250
BSNT_02416___ 251 CGACACTCATTCTGAAA-GAACTTGGCGTCCATACGATTACAGTTAAAGC 299
||||.||.| |||.||| |||||.|||||..|.|||||.||.||||||||
RBAM_014250__ 251 CGACGCTGA-TCTTAAAGGAACTCGGCGTGAACACGATCACGGTTAAAGC 299
BSNT_02416___ 300 GCAGAACGATTATCACGAAAAAGTGCTGTCTAAAATTGGTGCGGATCACA 349
|||||||||||||||.||.||||||||..|.|||||.||.||.|||||||
RBAM_014250__ 300 GCAGAACGATTATCATGAGAAAGTGCTTGCGAAAATCGGGGCCGATCACA 349
BSNT_02416___ 350 TCGTCCACCCGGAACGCGATATGGCAAAACGAATTGCGCATAATATCGTG 399
||||||||||.|||||.||||||||||||||.||.||.||.||.|||||.
RBAM_014250__ 350 TCGTCCACCCTGAACGTGATATGGCAAAACGCATCGCCCACAACATCGTA 399
BSNT_02416___ 400 TCCAACAATGTACTTGACTATTTGGAGCTGTCTGAAGAGCATAGTCTTGT 449
||.||.|||||.|||||.||||||||||||||.||.||.||.||..||||
RBAM_014250__ 400 TCAAATAATGTGCTTGATTATTTGGAGCTGTCCGACGAACACAGCATTGT 449
BSNT_02416___ 450 TGAAATCGTAGCTAACAGCCGCCTGGCTGGAAATACGCTTCTCGATTTAG 499
.||.|||||.||.||||||.|.||.||.||.||.||.||.||.|||.|.|
RBAM_014250__ 450 GGAGATCGTGGCCAACAGCAGGCTTGCGGGCAACACACTGCTTGATCTGG 499
BSNT_02416___ 500 ATATTCGCGCAAAATACGGTATTAACATCGTAGCCATAAAAAGGGGCAAG 549
|.||.||.||.||.|||||.|||||.|||||.|||||.||.||.|..||.
RBAM_014250__ 500 ACATCCGGGCGAAGTACGGCATTAATATCGTGGCCATCAAGAGAGAAAAA 549
BSNT_02416___ 550 GAAGTCATCGTATCACCGCTTGCAACCGAAGTCATCCACCAAGAAGATAT 599
|||||.||||||||.|||||.||.||.|||.|.|||||..||||||||||
RBAM_014250__ 550 GAAGTGATCGTATCTCCGCTGGCGACTGAAATGATCCAAAAAGAAGATAT 599
BSNT_02416___ 600 ACTCATTGTTATTGGATCAGTTACAGACATCTCCCGTTTCGAAAAAAGAG 649
.|||||.|||||.||.||..||||.|||||.|||||.||.||||||||||
RBAM_014250__ 600 TCTCATCGTTATCGGCTCTCTTACGGACATTTCCCGATTTGAAAAAAGAG 649
BSNT_02416___ 650 TTCTTCATACAAAATAG- 666
|.|||||.|||||.| |
RBAM_014250__ 650 TGCTTCACACAAAGT-GA 666
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