Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02414 and RBAM_014230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:08
# Commandline: needle
# -asequence dna-align/BSNT_02414___kinC.1.9828.seq
# -bsequence dna-align/RBAM_014230___kinC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02414___kinC-RBAM_014230___kinC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02414___kinC-RBAM_014230___kinC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02414___kinC
# 2: RBAM_014230___kinC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1344
# Identity: 952/1344 (70.8%)
# Similarity: 952/1344 (70.8%)
# Gaps: 99/1344 ( 7.4%)
# Score: 3301.0
#
#
#=======================================
BSNT_02414___ 1 ATGAGAAAATATCAAGCTCGTATCATTTCCATCATTTTGGCAATGATTTT 50
|||.|||||||||||||.||||||||||||.|.||.||||||||||||||
RBAM_014230__ 1 ATGGGAAAATATCAAGCGCGTATCATTTCCTTAATCTTGGCAATGATTTT 50
BSNT_02414___ 51 TATAATGTTTTGGGATTATTTATTTTATTTTATAGGCAAA---AACCCGA 97
|||.||||||||||||||||||||||||.|.||.| || ||.||||
RBAM_014230__ 51 TATTATGTTTTGGGATTATTTATTTTATATGATTG---AACGGAATCCGA 97
BSNT_02414___ 98 TTAATTGGCCTGTTGATATTGTGTATACTGCAGTCACGCTGGTAAGTGTC 147
||||.|||||.|||||.||....|.|||.||.|||||..|..|.||.|||
RBAM_014230__ 98 TTAACTGGCCCGTTGACATCACCTTTACCGCCGTCACATTAATCAGCGTC 147
BSNT_02414___ 148 TGGATGCTGGCTTATTATATTGATGAGAAACAGCAGCTGGTTAAGAAAAT 197
|||.||||||||||||||.|.|||.|.|||.||||||||.|...|.|..|
RBAM_014230__ 148 TGGCTGCTGGCTTATTATGTGGATAATAAAAAGCAGCTGCTGGCGGAGCT 197
BSNT_02414___ 198 GAAGGATAACGAATGGAAGTATAAA-CA-----GCTTTCTGAAGAAAAAA 241
||||||.|.|| ||.|.||| || ||||||.||.||.||||
RBAM_014230__ 198 GAAGGACAGCG------AGCAGAAAGCAAAGGCGCTTTCAGATGAGAAAA 241
BSNT_02414___ 242 ACCGCATCATGGATAATTTGCAGGAAATCGTATTTCAAACGAATGCAAAA 291
||||.||||||||.|||.|||||||||||||.|||||.|||.|||||.||
RBAM_014230__ 242 ACCGGATCATGGACAATCTGCAGGAAATCGTTTTTCAGACGGATGCACAA 291
BSNT_02414___ 292 GGCGAA-ATTACATATTTAAACCAAGCGTGGGCATCAATAACCGGCTTTT 340
|| ||| |||||||||||.||.||.||.|||.|..|.||.||.|||...|
RBAM_014230__ 292 GG-GAATATTACATATTTGAATCAGGCCTGGACGGCGATTACGGGCCACT 340
BSNT_02414___ 341 CAATCAGTGAATGTATGGGAACAATGTATAACGATTACTTCATAAAAGAA 390
|.|||||.|||||||||||.||.||||||||.|||||.||.|||||||||
RBAM_014230__ 341 CCATCAGCGAATGTATGGGCACGATGTATAATGATTATTTTATAAAAGAA 390
BSNT_02414___ 391 AAGCACGTAGC--CGACCACATTAACACCCAAATCCAAAACAAAGC---- 434
|| ||.||.| .||..|.||||.|.|||||||| ||||
RBAM_014230__ 391 AA--ACATATCATTGATTATATTATCTCCCAAATC-------AAGCAGCA 431
BSNT_02414___ 435 GT---CTTCTGGCATGTTTACGGCAAAATACGTGACAAAAAACGGCACGA 481
|| |.||.||.|||||||||||.|||||..|.|.||.|.|||||.|||
RBAM_014230__ 432 GTCCCCGTCAGGAATGTTTACGGCCAAATATATTAAAAGAGACGGCTCGA 481
BSNT_02414___ 482 TTTTTTGGGGAGAAGTTCATTATAAACTTTACTATGACCGGGATGAC--C 529
|.||||||||||||||.||||||||.||.||.||||||| |..||| .
RBAM_014230__ 482 TCTTTTGGGGAGAAGTCCATTATAAGCTGTATTATGACC--GCAGACAGA 529
BSNT_02414___ 530 AATTTACAGGCAGCCTGGGTACAATGTCAGATATCACTGAGCGGAAAGAG 579
|||||...||.||||||||.||.|||||.|||||||.|||.||||||.|.
RBAM_014230__ 530 AATTTGTCGGAAGCCTGGGGACGATGTCTGATATCAGTGAACGGAAAAAA 579
BSNT_02414___ 580 GCTGAAGATGAGCTCATTGAGATTAATGAACGGCTGGCGAGGGAATCCCA 629
||.|..||.|||||..|.||.|..||.|||||.||.||.|.|.||||.||
RBAM_014230__ 580 GCGGTCGACGAGCTTCTGGAAACGAACGAACGCCTTGCCATGCAATCTCA 629
BSNT_02414___ 630 GAAACTATCAATCACAAGTGAACTTGCCGCAGGTATTGCTCATGAGGTCA 679
.||.||..|.||..|..|.||.|||||.|||||.||.||.|||||.||.|
RBAM_014230__ 630 AAAGCTGGCCATTGCCGGGGAGCTTGCGGCAGGAATCGCCCATGAAGTAA 679
BSNT_02414___ 680 GAAACCCTTTAACATCTGTCAGTGGTTTCCTCCAGATTATGAAAACACAA 729
||||.||||||||.||.|||||.||.||.||||||.|.||||||.|.||.
RBAM_014230__ 680 GAAATCCTTTAACGTCAGTCAGCGGCTTTCTCCAGCTGATGAAAGCCCAG 729
BSNT_02414___ 730 TATCCGGACAGAAAAGACTATTTTGACATCATCTTTTCAGAGATTAAAAG 779
||||||||.||||..||.||||||||.|||||.|||||.|||||||||||
RBAM_014230__ 730 TATCCGGAAAGAACGGATTATTTTGATATCATTTTTTCGGAGATTAAAAG 779
BSNT_02414___ 780 AATCGATTTAGTGCTCAGCGAGCTG---CTGCTTGCAAAACCGCAGGCAA 826
.||.|||.|.|||||..|.|||||| |||||.||.||.||||||.|..
RBAM_014230__ 780 GATTGATCTCGTGCTGGGGGAGCTGCTTCTGCTCGCCAAGCCGCAGACCG 829
BSNT_02414___ 827 TCACATTTAAAACACACCAGCTTAATGAGATCTTGAAACAAGTCACGACA 876
|.||.||||...|.||.||.||.||..|.||.||....||.||..||||.
RBAM_014230__ 830 TGACGTTTACCGCTCATCATCTCAACCATATTTTACGGCAGGTGGCGACG 879
BSNT_02414___ 877 TTGCTTGATACCAATGCAATTCTGTCCAATATCGTCATAGAGAAAAATTT 926
.|.|||||.||.||.||..|.|||||.||.|..||.||.|||||..||||
RBAM_014230__ 880 CTTCTTGACACGAACGCGGTGCTGTCGAACACTGTAATTGAGAAGGATTT 929
BSNT_02414___ 927 CAAAGAGACAGATGGCTGTATGATTAATGGAGACGAAAATCAGCTGAAGC 976
||...||||.||...|||||||.|.||.||.||||||||.||||||||.|
RBAM_014230__ 930 CAGGCAGACTGAGTCCTGTATGGTCAACGGTGACGAAAACCAGCTGAAAC 979
BSNT_02414___ 977 AGGTCTTTATCAACATCATTAAAAACGGAATTGAGGCAATGCCAAAGGGT 1026
||||.||||||||.||.||||||||.|..|||||.||.|||||..|.||.
RBAM_014230__ 980 AGGTATTTATCAATATTATTAAAAATGCGATTGAAGCGATGCCTGACGGC 1029
BSNT_02414___ 1027 GGTG-----TCGTAACCATTTCAACTGCTAAAACCGCCTCTCAT------ 1065
|| | ||.| ||||..|| |||||.| .||
RBAM_014230__ 1030 GG-GAATATTCAT----ATTTATAC----AAAACGG-----GATGAAGAA 1065
BSNT_02414___ 1066 ---GCAGTGATAAGCGTAAAGGATGAAGGAAACGGCATGCCGCAGGAAAA 1112
||.|||||.|||.||.||||||||||||||||||||.||.|.|||||
RBAM_014230__ 1066 TACGCGGTGATCAGCATACAGGATGAAGGAAACGGCATGTCGAAAGAAAA 1115
BSNT_02414___ 1113 GC-TGAAGCAGATTGGCAAACCTTTTTATTCAACAAAAGAAAAGGGCACT 1161
|| |||| .|.||.||.|||||.||||..|||||||||||..||||.||.
RBAM_014230__ 1116 GCTTGAA-AACATCGGGAAACCGTTTTTCTCAACAAAAGATCAGGGAACG 1164
BSNT_02414___ 1162 GGACTGGGACTTCCCATTTGTTTGAGAATCCTGAAGGAACATGACGGGGA 1211
||.||.||.|||||.||||||||..||||.||||||||.|||.|.||..|
RBAM_014230__ 1165 GGTCTCGGGCTTCCGATTTGTTTACGAATTCTGAAGGAGCATAATGGTAA 1214
BSNT_02414___ 1212 ATTGAAAATCGAAAGTGAAGCTGGAAAAGGCAG--CGTCTTTCAAGTGGT 1259
|.|.||.||..|.||..||..||||.||||||| || |||||.|||.|
RBAM_014230__ 1215 ACTTAACATTAAGAGCAAAAATGGAGAAGGCAGTACG--TTTCAGGTGAT 1262
BSNT_02414___ 1260 TTTGCCTTTAAAATCAGACAGCTGA------------------- 1284
|.||||.|||.||.| |.|.||||.
RBAM_014230__ 1263 TCTGCCGTTAGAAGC-GGCTGCTGTCCAAAAGGAGGAAAAATAA 1305
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