Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02412 and RBAM_014210
See
Amino acid alignment /
Visit
BSNT_02412 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:08
# Commandline: needle
# -asequence dna-align/BSNT_02412___mreBH.1.9828.seq
# -bsequence dna-align/RBAM_014210___mreBH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02412___mreBH-RBAM_014210___mreBH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02412___mreBH-RBAM_014210___mreBH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02412___mreBH
# 2: RBAM_014210___mreBH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1020
# Identity: 813/1020 (79.7%)
# Similarity: 813/1020 (79.7%)
# Gaps: 12/1020 ( 1.2%)
# Score: 3285.0
#
#
#=======================================
BSNT_02412___ 1 TTGGGTGAAAACATGTTTCAATCAACTGAAATCGGGATTGACTTAGGAAC 50
|||||||||||||||||.|||||.||.|||||||||||
RBAM_014210__ 1 ------------ATGTTTCAATCAACTGAGATCGGAATCGACTTAGGAAC 38
BSNT_02412___ 51 AGCTAATATACTTGTTTACAGCAAAAATAAAGGGATTATCCTAAATGAAC 100
.||||||||||||||||||||.|||||||||||.|||||..||||.||.|
RBAM_014210__ 39 CGCTAATATACTTGTTTACAGTAAAAATAAAGGAATTATTTTAAACGAGC 88
BSNT_02412___ 101 CATCTGTTGTCGCAGTGGATACGACGACAAAAGCAGTGCTTGCAATCGGA 150
|.||.||||||||.||.|||||.||.||.|||||.||||||||.||||||
RBAM_014210__ 89 CTTCCGTTGTCGCTGTAGATACAACAACGAAAGCGGTGCTTGCCATCGGA 138
BSNT_02412___ 151 GCTGATGCGAAAAACATGATCGGTAAAACACCGGGAAAAATTGTCGCTGT 200
.|.|||||.||||.|||||||||.||.||.|||||.|||||.|||||.||
RBAM_014210__ 139 ACGGATGCCAAAAGCATGATCGGAAAGACGCCGGGGAAAATCGTCGCCGT 188
BSNT_02412___ 201 CAGACCGATGAAAGATGGCGTGATCGCAGACTATGATATGACAACTGACC 250
..|.|||||||||||.||.||.||.||.||.||||||||||||||||||.
RBAM_014210__ 189 ACGGCCGATGAAAGACGGTGTCATTGCTGATTATGATATGACAACTGACT 238
BSNT_02412___ 251 TGCTAAAGCACATTATGAAAAAAGCCGCAAAAAGCATCGGCATGTCGTTC 300
|..||||.|||||||||||||||||||.|||||..|||||||||.|.|||
RBAM_014210__ 239 TATTAAAACACATTATGAAAAAAGCCGGAAAAAAAATCGGCATGACTTTC 288
BSNT_02412___ 301 AGAAAACCGAACGTAGTCGTTTGCACACCATCAGGCTCAACAGCAGTAGA 350
.|.||||||||.||.|||||.|||||.||.||||||||||||||.||.||
RBAM_014210__ 289 CGCAAACCGAATGTCGTCGTCTGCACGCCTTCAGGCTCAACAGCCGTTGA 338
BSNT_02412___ 351 ACGCCGCGCCATCAGTGATGCGGTGAAAAATTGCGGCGCGAAAAACGTTC 400
||||||.|||||||||||.||.||.|||||.|||||.|||||||||||||
RBAM_014210__ 339 ACGCCGTGCCATCAGTGACGCTGTCAAAAACTGCGGAGCGAAAAACGTTC 388
BSNT_02412___ 401 ATTTAATCGAAGAGCCAGTTGCAGCCGCCATCGGAGCGGATTTACCGGTT 450
|.||.||.|||||.||.||.||.||.||.|||||.||.||..|.||.|||
RBAM_014210__ 389 ACTTGATTGAAGAACCCGTAGCCGCTGCAATCGGGGCCGACCTCCCTGTT 438
BSNT_02412___ 451 GATGAGCCGGTTGCCAATGTGGTAGTAGATATCGGCGGAGGGACGACAGA 500
||.||||||||.||.||.||.||.||||||||||||||.||.|||||.||
RBAM_014210__ 439 GACGAGCCGGTCGCAAACGTCGTCGTAGATATCGGCGGCGGTACGACTGA 488
BSNT_02412___ 501 GGTCGCTATTATTTCCTTCGGTGGCGTTGTTTCCTGCCATTCTATCAGGA 550
.|||||.||.||.||.|||||.|||||.||.|||||||||||.|||||.|
RBAM_014210__ 489 AGTCGCCATCATCTCATTCGGGGGCGTCGTATCCTGCCATTCGATCAGAA 538
BSNT_02412___ 551 TCGGCGGAGACCAGCTTGATGAGGATATCGTTTCTTTCGTCCGTAAAAAA 600
|||||||.||||||||||||||.|||||||..||.||||||.|.||||||
RBAM_014210__ 539 TCGGCGGCGACCAGCTTGATGAAGATATCGCCTCGTTCGTCAGAAAAAAA 588
BSNT_02412___ 601 TACAATTTGCTGATCGGCGAACGCACAGCTGAGCAGGTAAAAATGGAAAT 650
|||||..||||||||||.|||||.||.||.||.||.||.|||||||||||
RBAM_014210__ 589 TACAACCTGCTGATCGGGGAACGTACGGCAGAACAAGTGAAAATGGAAAT 638
BSNT_02412___ 651 TGGCCATGCTCTGATTGAACATATACCAGAGGCAATGGAAATTCGGGGAC 700
.||...|||..||||.||||||.|.||.||..|.||||||||.||.||.|
RBAM_014210__ 639 CGGTTTTGCATTGATCGAACATGTGCCGGAAACGATGGAAATCCGCGGGC 688
BSNT_02412___ 701 GTGACCTCGTGACAGGTCTTCCAAAAACCATTATGCTTCAATCCAACGAA 750
|||||||.||.||.|||||.||.||.||.||.|..||.|||||.||.|||
RBAM_014210__ 689 GTGACCTTGTAACCGGTCTGCCGAAGACAATCAGACTGCAATCTAATGAA 738
BSNT_02412___ 751 ATTCAAGATGCAATGCGTGAATCCCTCCTGCATATTCTTGAAGCCATCAG 800
|||||..|.||.||||||||.||.||||||||||||||||||||.|||||
RBAM_014210__ 739 ATTCAGCACGCGATGCGTGAGTCGCTCCTGCATATTCTTGAAGCGATCAG 788
BSNT_02412___ 801 AGCGACACTTGAGGACTGTCCGCCTGAATTGAGCGGAGATATTGTTGATC 850
||||||||||||.||.||||||||.||..|.|||||.|||||.|||||.|
RBAM_014210__ 789 AGCGACACTTGAAGATTGTCCGCCGGAGCTCAGCGGTGATATCGTTGACC 838
BSNT_02412___ 851 GCGGCGTTATTTTAACAGGCGGCGGCGCGCTCCTTAATGGAATTAAAGAA 900
|||||||..|.|||||.|||||.|||.|.||..|.||.||.||.||||||
RBAM_014210__ 839 GCGGCGTCGTGTTAACCGGCGGAGGCTCCCTTTTAAACGGGATGAAAGAA 888
BSNT_02412___ 901 TGGCTCACAGAAGAGATTGTCGTGCCTGTACACGTGGCGCAAAACCCGCT 950
|||||.|||||.||.||.|||||.||.||.||..|||||..|||.|||||
RBAM_014210__ 889 TGGCTGACAGATGAAATCGTCGTTCCCGTTCATTTGGCGGCAAATCCGCT 938
BSNT_02412___ 951 TGAATCTGTAGCAATCGGCACAGGCCGTTCTTTAGAAGTGATTGATAAGC 1000
||||||.||.||.||||||||.||.|||||.|||||.||.||.||.||||
RBAM_014210__ 939 TGAATCAGTGGCTATCGGCACGGGACGTTCATTAGACGTCATCGACAAGC 988
BSNT_02412___ 1001 TGCAAAAGGCAATTAAATAG 1020
|||||||.||.||||||||.
RBAM_014210__ 989 TGCAAAAAGCGATTAAATAA 1008
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.