Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02409 and RBAM_014190
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:08
# Commandline: needle
# -asequence dna-align/BSNT_02409___ampS.1.9828.seq
# -bsequence dna-align/RBAM_014190___ampS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02409___ampS-RBAM_014190___ampS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02409___ampS-RBAM_014190___ampS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02409___ampS
# 2: RBAM_014190___ampS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1241
# Identity: 998/1241 (80.4%)
# Similarity: 998/1241 (80.4%)
# Gaps: 16/1241 ( 1.3%)
# Score: 3988.5
#
#
#=======================================
BSNT_02409___ 1 ATGGATTCATTTTCACAGAAA--TTAAATACATATGCACAGCTGGCGGTA 48
|||..|||.||| ||.|||| |||.||||||||||.||||||||||||
RBAM_014190__ 1 ATGAGTTCGTTT--ACTGAAAAGTTACATACATATGCTCAGCTGGCGGTA 48
BSNT_02409___ 49 GAAGTCGGCGTTAATGTCCAAAAAGGCCAGTATGTAGTCGTAAATGCTTC 98
|||||||||||.||||||||||||||.|||.|.||.||..|.|||||.||
RBAM_014190__ 49 GAAGTCGGCGTCAATGTCCAAAAAGGACAGCACGTCGTAATCAATGCCTC 98
BSNT_02409___ 99 AACAGACGTTCGGGATTTTGTCCGTTTAATTGTAAAACACGCATATGAAA 148
|||.||.||||||||..|||||.|..|..|||..|||||..|.|||||||
RBAM_014190__ 99 AACTGATGTTCGGGAACTTGTCAGACTGCTTGCCAAACATTCTTATGAAA 148
BSNT_02409___ 149 AGGGCGCAAAAAACGTCACCGTGAATTGGCAGGATGACGAAGTCGCCAAA 198
|.|||||.||||||||||||||.|||||||||||.||.|||.|..|||.|
RBAM_014190__ 149 AAGGCGCTAAAAACGTCACCGTAAATTGGCAGGACGATGAACTGTCCAGA 198
BSNT_02409___ 199 TTAAAATACGAACTTGCGCCGTTTGAAGCATTTGAAGAATATCCTGAATG 248
|||||||||||..|.||.||.||||||||.||||||||.|||||||||||
RBAM_014190__ 199 TTAAAATACGAGATGGCACCTTTTGAAGCGTTTGAAGAGTATCCTGAATG 248
BSNT_02409___ 249 GGAAGCAAAAGGCAGAGAAGAGCTTGCCAAAAATGGAGCTGCTTTCATTT 298
||||||||||||.|.|||||||||.||.|||||.||.|||||.||.||||
RBAM_014190__ 249 GGAAGCAAAAGGAAAAGAAGAGCTCGCGAAAAAAGGGGCTGCGTTTATTT 298
BSNT_02409___ 299 CTGTTGTGTCGTCAAACCCAGACTTGCTAAAAGGTATAGATTCCAAACGG 348
||||.||.||.||..||||.|||.||.|||||||.|..||...|||||||
RBAM_014190__ 299 CTGTCGTCTCATCCGACCCCGACCTGTTAAAAGGCACTGACGGCAAACGG 348
BSNT_02409___ 349 ATTGCGGCATTCCAAAAAGCAGCAGGCAAAGCATTACATACATACAGACA 398
|||||.||.|||||||||||.||.||.||||||||.||||||||||||||
RBAM_014190__ 349 ATTGCAGCGTTCCAAAAAGCCGCCGGAAAAGCATTGCATACATACAGACA 398
BSNT_02409___ 399 ATATATTCAATCAGACAAAGTCAGCTGGACTGTCGTAGGTGCGGCATCAG 448
|||||||||||||||.||.|||||||||||.||..|.||.||.||.|||.
RBAM_014190__ 399 ATATATTCAATCAGATAAGGTCAGCTGGACGGTGATCGGAGCCGCTTCAA 448
BSNT_02409___ 449 CAGGCTGGGCTCACAAGGTGTTTCCTGGCAAATCAG-AGGAGGA---AGC 494
||||||||||..|.||.|||||.||.| ||||| .|||.|| |||
RBAM_014190__ 449 CAGGCTGGGCGAAAAAAGTGTTCCCGG----ATCAGCCGGAAGAAACAGC 494
BSNT_02409___ 495 GATCCACCTTCTGTGGGAAGAAATTTTTAAAGCGACGCGCGTAAATGAAG 544
..|.||.|||.|.||||||||||||||.|||.||||.|||||||||||||
RBAM_014190__ 495 CGTTCAGCTTTTATGGGAAGAAATTTTCAAAACGACCCGCGTAAATGAAG 544
BSNT_02409___ 545 ACAACCCGGTTCAGGCGTGGATCAATCATGACCAAAATCTTCATGAAAAA 594
|.|||||.||..|.||.||||..||.|||||.|||||.||||||||||||
RBAM_014190__ 545 AAAACCCTGTGGAAGCATGGAAAAAACATGATCAAAACCTTCATGAAAAA 594
BSNT_02409___ 595 GTTGACCATTTGAACGAGAGACATTAC-GCTGCCTTACATTATCAAGCTG 643
||.||.||.||.|||.|.|.||||||| || |||.|.||||||||.||||
RBAM_014190__ 595 GTGGAACACTTAAACAAAAAACATTACAGC-GCCCTGCATTATCAGGCTG 643
BSNT_02409___ 644 AAGGAACTGATTTAACAATTAAGCTGCCTAGGAAGCATGTTTGGGCAGGT 693
|||||||.||.|||||.|||.|.|||||.|..||.|||||.||||||||.
RBAM_014190__ 644 AAGGAACAGACTTAACCATTGAACTGCCGAAAAAACATGTATGGGCAGGC 693
BSNT_02409___ 694 GCGGGAAGCGTGAATGAAAGCGGCCATGAGTTTATGGCCAATATGCCGAC 743
|||||||||||||||||.|||||.||.||.||.||||||||.||||||||
RBAM_014190__ 694 GCGGGAAGCGTGAATGAGAGCGGGCACGAATTCATGGCCAACATGCCGAC 743
BSNT_02409___ 744 AGAAGAAGTGTTCACGCTGCCGCAAAAAGACGGGGTTGACGGTGTGGTAT 793
||||||.||.|||||.||.|||||....||||||||..||||...|||.|
RBAM_014190__ 744 AGAAGAGGTTTTCACCCTCCCGCAGCGTGACGGGGTGAACGGCACGGTTT 793
BSNT_02409___ 794 CAAGCACAAAACCATTAAGCTACGGCGGAAATATTATTGAAAATTTCACC 843
|.|||||.|||||..|.|||||||||||.||.||||||||.||.|||||.
RBAM_014190__ 794 CCAGCACGAAACCGCTGAGCTACGGCGGCAACATTATTGATAACTTCACT 843
BSNT_02409___ 844 CTGACGTTTGAAAATGGCCGTATAGTCGACATTAAAGCTGAAAAAGGTGA 893
||.||.||||||||.|||||.||.|||||..|.||||||||||||||.||
RBAM_014190__ 844 CTTACCTTTGAAAACGGCCGCATTGTCGATGTGAAAGCTGAAAAAGGCGA 893
BSNT_02409___ 894 GGATATTTTAAAAGAACTGGTGGAAACAGATGAAGGTTCTCACTATTTAG 943
|||.||||||||||...|.||.|||||.||||||||.||.||||||.|.|
RBAM_014190__ 894 GGAGATTTTAAAAGGCATCGTTGAAACCGATGAAGGCTCACACTATCTCG 943
BSNT_02409___ 944 GTGAAGTGGCACTT-GTTCCTTACGATTCGCCTATATCACAATCAAACAT 992
|||||||||| ||| ||.||.||||||||.||.||.|||||||||||.||
RBAM_014190__ 944 GTGAAGTGGC-CTTAGTGCCGTACGATTCACCGATTTCACAATCAAATAT 992
BSNT_02409___ 993 TCTTTTCTATAACACGCTGTTTGATGAAAACGCGTCAAATCATTTGGCGA 1042
|.|.||.||.|||||.||||..|||||||||||.||.||.||.|||||||
RBAM_014190__ 993 TTTATTTTACAACACACTGTACGATGAAAACGCCTCTAACCACTTGGCGA 1042
BSNT_02409___ 1043 TCGGAAGCGCCTATGCCTTTAATATTGAAGGCGGAAAGCAGATGTCTCGT 1092
||||.||.||.|||||||||||||||||.|||||.||.||.|||.|.||.
RBAM_014190__ 1043 TCGGCAGTGCGTATGCCTTTAATATTGAGGGCGGCAAACAAATGACACGG 1092
BSNT_02409___ 1093 GAAGAGCTTGTCAAAGAAGGCCTAAATGAGAGCATTACACACGTGGACTT 1142
|||||||||||||||||.|||.|||||||.||||||||||||||.||.||
RBAM_014190__ 1093 GAAGAGCTTGTCAAAGAGGGCTTAAATGAAAGCATTACACACGTAGATTT 1142
BSNT_02409___ 1143 TATGATCGGTTCTAAGGATATGAATATTGACGGAATTACGGCAGACGGGA 1192
||||.|||||||.||.|||||||||||.|||||.|||||..|.|||||.|
RBAM_014190__ 1143 TATGGTCGGTTCCAAAGATATGAATATCGACGGCATTACTACGGACGGCA 1192
BSNT_02409___ 1193 AAAGAGAGCCTATCTTCAGAAACGGAAATTGGGCTTTTTAA 1233
|||||||.||.|||||||||||||||||.|||||.||||||
RBAM_014190__ 1193 AAAGAGAACCGATCTTCAGAAACGGAAACTGGGCATTTTAA 1233
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