Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02404 and RBAM_014150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:07
# Commandline: needle
# -asequence dna-align/BSNT_02404___sipT.1.9828.seq
# -bsequence dna-align/RBAM_014150___sipT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02404___sipT-RBAM_014150___sipT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02404___sipT-RBAM_014150___sipT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02404___sipT
# 2: RBAM_014150___sipT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 582
# Identity: 451/582 (77.5%)
# Similarity: 451/582 (77.5%)
# Gaps: 0/582 ( 0.0%)
# Score: 1731.0
#
#
#=======================================
BSNT_02404___ 1 TTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAAC 50
|||||.||.|||.||||..|.|.|.||||.|||.|||..||.|.||||.|
RBAM_014150__ 1 TTGACTGAAGAACAAAAACCTACTTCTGAAAAATCGGTAAAAAGAAAATC 50
BSNT_02404___ 51 CAATACGTACCTGGAATGGGGTAAAGCGATTGTCATCGCTGTTCTGCTGG 100
|||.||.||...|||||||||.||.||.||..|.||.||.|||...||.|
RBAM_014150__ 51 CAACACATATTGGGAATGGGGAAAGGCCATCATTATAGCGGTTGCACTTG 100
BSNT_02404___ 101 CTCTCCTGATCCGTCACTTTTTGTTTGAACCGTATTTAGTTGAAGGTTCA 150
|.||..|.|||||.||.||..|||||||||||||.|||||.|||||.|||
RBAM_014150__ 101 CGCTGTTAATCCGCCATTTCCTGTTTGAACCGTACTTAGTGGAAGGATCA 150
BSNT_02404___ 151 TCTATGTATCCCACATTACATGACGGAGAAAGGCTGTTTGTGAATAAAAC 200
||.|||||.||.||||||||||||||.||||||||.|||||.||.||||.
RBAM_014150__ 151 TCAATGTACCCGACATTACATGACGGTGAAAGGCTATTTGTCAACAAAAG 200
BSNT_02404___ 201 AGTCAACTATATCGGCGAGCTGAAGCGCGGAGATATCGTTATTATCAACG 250
.|||||.||||||||.||..|..||||.|||||.|||||.|||||.||||
RBAM_014150__ 201 CGTCAATTATATCGGAGAAATCGAGCGGGGAGACATCGTCATTATTAACG 250
BSNT_02404___ 251 GTGAAACTTCTAAAATCCATTATGTAAAAAGATTGATCGGAAAGCCTGGA 300
|.||.||.||.|||.|||||||||||||..|..|.||||||||.||.|||
RBAM_014150__ 251 GCGATACGTCGAAAGTCCATTATGTAAAGCGGCTCATCGGAAAACCCGGA 300
BSNT_02404___ 301 GAAACCGTTCAAATGAAGGATGACACGCTTTATATAAACGGTAAAAAAGT 350
|||||.||..|||||||..||||||||||||||||||||||.||||||.|
RBAM_014150__ 301 GAAACGGTGGAAATGAAAAATGACACGCTTTATATAAACGGCAAAAAAAT 350
BSNT_02404___ 351 AGCCGAGCCTTACTTGTCTAAAAACAAGAAGGAAGCAGAAAAACTTGGTG 400
.||.||.||.|||.|..|.|..||.||.||.|||||..|||||||.||.|
RBAM_014150__ 351 CGCAGAACCGTACCTCGCGAGCAATAAAAAAGAAGCTAAAAAACTGGGAG 400
BSNT_02404___ 401 TCAGTCTGACAGGAGACTTTGGACCGGTTAAGGTTCCGAAAGGCAAATAC 450
|||..|||||.|||||.||.||.||.||.|||||||||||||||||||||
RBAM_014150__ 401 TCAACCTGACGGGAGATTTCGGCCCCGTAAAGGTTCCGAAAGGCAAATAC 450
BSNT_02404___ 451 TTTGTCATGGGAGATAACCGGCTGAATTCGATGGACAGCCGAAACGGGCT 500
||.||||||||.||.||.||||||||.||.|||||||||||.|||||.||
RBAM_014150__ 451 TTCGTCATGGGCGACAATCGGCTGAACTCAATGGACAGCCGGAACGGACT 500
BSNT_02404___ 501 GGGACTGATCGCGGAAGATCGAATTGTCGGCACATCGAAGTTTGTCTTTT 550
.||..|.||.||.|||.|.||.||.||||||||.|||||||||||.||.|
RBAM_014150__ 501 CGGTTTAATTGCCGAAAACCGGATCGTCGGCACCTCGAAGTTTGTGTTCT 550
BSNT_02404___ 551 TCCCGTTTAACGAAATGCGTCAAACAAAATAA 582
||||||||.|.||.||||||||.|||||||||
RBAM_014150__ 551 TCCCGTTTCATGATATGCGTCAGACAAAATAA 582
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