Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02404 and RBAM_014150

See Amino acid alignment / Visit BSNT_02404 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:07
# Commandline: needle
#    -asequence dna-align/BSNT_02404___sipT.1.9828.seq
#    -bsequence dna-align/RBAM_014150___sipT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02404___sipT-RBAM_014150___sipT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02404___sipT-RBAM_014150___sipT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02404___sipT
# 2: RBAM_014150___sipT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 582
# Identity:     451/582 (77.5%)
# Similarity:   451/582 (77.5%)
# Gaps:           0/582 ( 0.0%)
# Score: 1731.0
# 
#
#=======================================

BSNT_02404___      1 TTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAAC     50
                     |||||.||.|||.||||..|.|.|.||||.|||.|||..||.|.||||.|
RBAM_014150__      1 TTGACTGAAGAACAAAAACCTACTTCTGAAAAATCGGTAAAAAGAAAATC     50

BSNT_02404___     51 CAATACGTACCTGGAATGGGGTAAAGCGATTGTCATCGCTGTTCTGCTGG    100
                     |||.||.||...|||||||||.||.||.||..|.||.||.|||...||.|
RBAM_014150__     51 CAACACATATTGGGAATGGGGAAAGGCCATCATTATAGCGGTTGCACTTG    100

BSNT_02404___    101 CTCTCCTGATCCGTCACTTTTTGTTTGAACCGTATTTAGTTGAAGGTTCA    150
                     |.||..|.|||||.||.||..|||||||||||||.|||||.|||||.|||
RBAM_014150__    101 CGCTGTTAATCCGCCATTTCCTGTTTGAACCGTACTTAGTGGAAGGATCA    150

BSNT_02404___    151 TCTATGTATCCCACATTACATGACGGAGAAAGGCTGTTTGTGAATAAAAC    200
                     ||.|||||.||.||||||||||||||.||||||||.|||||.||.||||.
RBAM_014150__    151 TCAATGTACCCGACATTACATGACGGTGAAAGGCTATTTGTCAACAAAAG    200

BSNT_02404___    201 AGTCAACTATATCGGCGAGCTGAAGCGCGGAGATATCGTTATTATCAACG    250
                     .|||||.||||||||.||..|..||||.|||||.|||||.|||||.||||
RBAM_014150__    201 CGTCAATTATATCGGAGAAATCGAGCGGGGAGACATCGTCATTATTAACG    250

BSNT_02404___    251 GTGAAACTTCTAAAATCCATTATGTAAAAAGATTGATCGGAAAGCCTGGA    300
                     |.||.||.||.|||.|||||||||||||..|..|.||||||||.||.|||
RBAM_014150__    251 GCGATACGTCGAAAGTCCATTATGTAAAGCGGCTCATCGGAAAACCCGGA    300

BSNT_02404___    301 GAAACCGTTCAAATGAAGGATGACACGCTTTATATAAACGGTAAAAAAGT    350
                     |||||.||..|||||||..||||||||||||||||||||||.||||||.|
RBAM_014150__    301 GAAACGGTGGAAATGAAAAATGACACGCTTTATATAAACGGCAAAAAAAT    350

BSNT_02404___    351 AGCCGAGCCTTACTTGTCTAAAAACAAGAAGGAAGCAGAAAAACTTGGTG    400
                     .||.||.||.|||.|..|.|..||.||.||.|||||..|||||||.||.|
RBAM_014150__    351 CGCAGAACCGTACCTCGCGAGCAATAAAAAAGAAGCTAAAAAACTGGGAG    400

BSNT_02404___    401 TCAGTCTGACAGGAGACTTTGGACCGGTTAAGGTTCCGAAAGGCAAATAC    450
                     |||..|||||.|||||.||.||.||.||.|||||||||||||||||||||
RBAM_014150__    401 TCAACCTGACGGGAGATTTCGGCCCCGTAAAGGTTCCGAAAGGCAAATAC    450

BSNT_02404___    451 TTTGTCATGGGAGATAACCGGCTGAATTCGATGGACAGCCGAAACGGGCT    500
                     ||.||||||||.||.||.||||||||.||.|||||||||||.|||||.||
RBAM_014150__    451 TTCGTCATGGGCGACAATCGGCTGAACTCAATGGACAGCCGGAACGGACT    500

BSNT_02404___    501 GGGACTGATCGCGGAAGATCGAATTGTCGGCACATCGAAGTTTGTCTTTT    550
                     .||..|.||.||.|||.|.||.||.||||||||.|||||||||||.||.|
RBAM_014150__    501 CGGTTTAATTGCCGAAAACCGGATCGTCGGCACCTCGAAGTTTGTGTTCT    550

BSNT_02404___    551 TCCCGTTTAACGAAATGCGTCAAACAAAATAA    582
                     ||||||||.|.||.||||||||.|||||||||
RBAM_014150__    551 TCCCGTTTCATGATATGCGTCAGACAAAATAA    582


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