Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02402 and RBAM_014140
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:07
# Commandline: needle
# -asequence dna-align/BSNT_02402___fruA.1.9828.seq
# -bsequence dna-align/RBAM_014140___fruA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02402___fruA-RBAM_014140___fruA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02402___fruA-RBAM_014140___fruA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02402___fruA
# 2: RBAM_014140___fruA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1913
# Identity: 1557/1913 (81.4%)
# Similarity: 1557/1913 (81.4%)
# Gaps: 16/1913 ( 0.8%)
# Score: 6350.5
#
#
#=======================================
BSNT_02402___ 1 GTGAAAATAACTGAGCTTTTAACGAAG-CATACGATAAAGCTTAATATTG 49
|||||.|||||||||||.||||| ||| .||||.||..|.||.|||||.|
RBAM_014140__ 1 GTGAAGATAACTGAGCTGTTAAC-AAGAGATACAATTCATCTCAATATAG 49
BSNT_02402___ 50 AGAGCAAAGAAAAAGAAAATGTTATTGACGAAATGGTCACTGTTCTTGAT 99
|.||||||||.||||||||.|||||.||.||||||||.||.||.|||||.
RBAM_014140__ 50 AAAGCAAAGAGAAAGAAAACGTTATCGATGAAATGGTGACAGTGCTTGAC 99
BSNT_02402___ 100 AAGGCTGGAAAGTTAAATGACCGACAAGCCTATAAAGAAGCCATTTTAAA 149
||.||.||.|..|||||||||.||.|.||.||.||||.||||||||||||
RBAM_014140__ 100 AAAGCCGGCAGATTAAATGACAGAGAGGCTTACAAAGCAGCCATTTTAAA 149
BSNT_02402___ 150 TCGCGAAAGCCAAAGCTCCACGGGTATCGGTGAAGGAATCGCTATCCCCC 199
|||.||||||||||||||.|||||.|||||.|||||.||.||.|||||.|
RBAM_014140__ 150 TCGTGAAAGCCAAAGCTCAACGGGAATCGGCGAAGGCATTGCCATCCCTC 199
BSNT_02402___ 200 ATGCGAAAACGGCAAGCGTTATCAACCCGGCGATCGCGTTCGGACGTTCA 249
|||||||.|||||.|||||.||.||||||||.|||||.|||||.||||||
RBAM_014140__ 200 ATGCGAAGACGGCGAGCGTCATTAACCCGGCCATCGCATTCGGCCGTTCA 249
BSNT_02402___ 250 AAAGACGGCGTCGATTATGAATCATTAGACGGTCAGCCGGCTCACTTAGT 299
|||||.||.||.|||||||||||||||||||||||||||||.|||.|.||
RBAM_014140__ 250 AAAGATGGTGTGGATTATGAATCATTAGACGGTCAGCCGGCACACCTGGT 299
BSNT_02402___ 300 GTTCATGATCGCGGCGACTGAAGGCGCAAACAACACTCACCTTGAAGCGT 349
.||.|||||.|||||.||.|||||.||.||.||.||.||||||||.||.|
RBAM_014140__ 300 CTTTATGATTGCGGCAACCGAAGGAGCGAATAATACGCACCTTGAGGCAT 349
BSNT_02402___ 350 TGTCAAGGCTTTCAACGCTGTTAATGCGTGAAGAAATCCGTAAGCAGCTC 399
|.|||||.|||||||||||..|.||||||||.||||||||.||.|||||.
RBAM_014140__ 350 TATCAAGACTTTCAACGCTTCTCATGCGTGAGGAAATCCGCAAACAGCTT 399
BSNT_02402___ 400 CTTGAAGCTGAGTCTGAAGATGCCATCATCGACATTATTAATCAGCACGA 449
|||||||||||.||.||||||||.|||||.|||||.||.||||||||.||
RBAM_014140__ 400 CTTGAAGCTGAATCAGAAGATGCGATCATTGACATCATCAATCAGCATGA 449
BSNT_02402___ 450 TAAAGATGATGACGAAGAGGAAGAGGAAGAGGAAGCGGCACCAGCACCTG 499
.||||||||.||.||.||.||||||.|.||.|||..|| ||||.||..
RBAM_014140__ 450 CAAAGATGACGATGAGGAAGAAGAGCAGGAAGAACAGG---CAGCGCCGT 496
BSNT_02402___ 500 CCGGAAAAGGAAAAATTTTAGCGGTTACTGCATGTCCGACAGGTATTGCC 549
|.|||||.||.|||||..|.||.|||||.|||||||||||||||||.|||
RBAM_014140__ 497 CAGGAAAGGGCAAAATCCTTGCCGTTACGGCATGTCCGACAGGTATCGCC 546
BSNT_02402___ 550 CATACATTCATGGCTGCGGATGCCCTTAAAGAAAAAGCGAAAGAGCTTGG 599
|||||.||||||||.||.||.||.||.||.|||||||||||||||||.||
RBAM_014140__ 547 CATACGTTCATGGCAGCTGACGCACTGAAGGAAAAAGCGAAAGAGCTCGG 596
BSNT_02402___ 600 TGTGGAAATTAAGGTCGAAACAAATGGGTCAAGCGGCATTAAGCACAAGC 649
.||.||.|||||.|||||.|||||.||.||||||||.||.||.||.||||
RBAM_014140__ 597 CGTTGACATTAAAGTCGAGACAAACGGCTCAAGCGGTATCAAACATAAGC 646
BSNT_02402___ 650 TCACTGCCCAAGAAATCGAAGATGCACCTGCAATCATTGTCGCAGCGGAC 699
|.||.||.||||||||.|||||.||.|||||.|||||.||.||.||.||.
RBAM_014140__ 647 TGACGGCTCAAGAAATTGAAGACGCGCCTGCGATCATCGTGGCGGCTGAT 696
BSNT_02402___ 700 AAGCAGGTTGAAATGGAACGTTTTAAAGGCAAGCGCGTACTTCAAGTTCC 749
||.|||||||||||||||||.|||||||||||.|..||.||||||||.||
RBAM_014140__ 697 AAACAGGTTGAAATGGAACGCTTTAAAGGCAAACATGTTCTTCAAGTGCC 746
BSNT_02402___ 750 TGTAACGGCGGGTATCAGACGTCCGCAAGAGCTTATCGAAAAAGCGATGA 799
|||.|||||.||||||||||||||.||.||.||.||.||||||||..|.|
RBAM_014140__ 747 TGTGACGGCCGGTATCAGACGTCCTCAGGAACTGATTGAAAAAGCCGTTA 796
BSNT_02402___ 800 ATCAAGATGCGCCGATTTATCAAGGCAGCGGCGGCGGTTCAGCAGCTTCA 849
|.|||||||||||||||||..|.|||||||||||.||.||..|.||||||
RBAM_014140__ 797 ACCAAGATGCGCCGATTTACGAGGGCAGCGGCGGAGGATCTTCCGCTTCA 846
BSNT_02402___ 850 AACGACGATGAAGAAG---CGAAAGGCAAGTCTGGAAGCGGTATCGGAAA 896
||||||||.| |||||...||.||.||.|...|||||||||.
RBAM_014140__ 847 ------GATGAAGACGGTCCGAAACAGAAATCAGGCACAAGTATCGGAAG 890
BSNT_02402___ 897 CGCGTTTTATAAGCACCTGATGAGCGGTGTCAGCAACATGCTTCCGTTCG 946
..|.||.|||||.|||.|.|||||||||||||||||||||||.||.||.|
RBAM_014140__ 891 TACTTTCTATAAACACTTAATGAGCGGTGTCAGCAACATGCTGCCATTTG 940
BSNT_02402___ 947 TAGTCGGCGGCGGTATTCTCGTTGCGATTTCATTCTTCTGGGGAATTCAC 996
|.|||||||||||.|||||||||||||||||||||||||||||||||||.
RBAM_014140__ 941 TCGTCGGCGGCGGAATTCTCGTTGCGATTTCATTCTTCTGGGGAATTCAT 990
BSNT_02402___ 997 TCTGCTGATCCGAATGATCCTAGCTACAACACGTTTGCAGCAGCATTAAA 1046
||.|||||||||||.||.||.|..||||||||||||||.|||||..|.||
RBAM_014140__ 991 TCAGCTGATCCGAAAGACCCGACATACAACACGTTTGCCGCAGCGCTGAA 1040
BSNT_02402___ 1047 CTTTATCGGCGGCGACAATGCATTAAAACTGATTGTTGCAGTTCTGGCCG 1096
|||||||||||||||.|||||.|||||.|||||||||||||||||.||||
RBAM_014140__ 1041 CTTTATCGGCGGCGATAATGCGTTAAAGCTGATTGTTGCAGTTCTTGCCG 1090
BSNT_02402___ 1097 GTTTCATTGCGATGAGTATTGCAGATCGTCCTGGTTTTGCGCCTGGTATG 1146
|.|||||.||.|||||||||||.||.|||||.||.||||||||.||||||
RBAM_014140__ 1091 GATTCATCGCAATGAGTATTGCGGACCGTCCGGGATTTGCGCCGGGTATG 1140
BSNT_02402___ 1147 GTCGGAGGATTTATGGCTACTCAAGCGAATGCTGGATTCTTAGGCGGCTT 1196
|||||.||||||||||||||.||.||||||||.||||||||.|||||..|
RBAM_014140__ 1141 GTCGGCGGATTTATGGCTACGCAGGCGAATGCCGGATTCTTGGGCGGACT 1190
BSNT_02402___ 1197 AATTGCCGGATTCCTTGCCGGTTATGTCGTGATTTTACTGAAAAAAGTAT 1246
.||||||||||||.|.||||||||||||||..|..|.||||||||..|.|
RBAM_014140__ 1191 GATTGCCGGATTCTTAGCCGGTTATGTCGTAGTCCTGCTGAAAAAGCTGT 1240
BSNT_02402___ 1247 TTACGTTTATCCCTCAGTCACTTGATGGATTAAAACCTGTTTTGATTTAC 1296
||...|||||.||||||.|.|||||.||||||||||||||.||||||||.
RBAM_014140__ 1241 TTGTCTTTATTCCTCAGACTCTTGACGGATTAAAACCTGTATTGATTTAT 1290
BSNT_02402___ 1297 CCGCTGTTCGGTATTTTTATCACTGGCGTATTAATGCAATTTGTCGTCAA 1346
||||||.||||||||||||||||.||.||..|.|||||.||||||.|.||
RBAM_014140__ 1291 CCGCTGCTCGGTATTTTTATCACCGGTGTCCTGATGCAGTTTGTCATTAA 1340
BSNT_02402___ 1347 TACACCTGTAGCGGCATTTATGAATTTCTTAACAAACTGGCTTGAAAGCC 1396
.||||||||.||.||.||||||||||||||||||||.|||||||||||||
RBAM_014140__ 1341 CACACCTGTCGCAGCGTTTATGAATTTCTTAACAAATTGGCTTGAAAGCC 1390
BSNT_02402___ 1397 TTGGTACTGGAAATCTTGTGTTAATGGGTATTATCTTGGGCGGCATGATG 1446
||||.||.|||||.|||||.||||||||.|||||.||.|||||.||||||
RBAM_014140__ 1391 TTGGAACCGGAAACCTTGTCTTAATGGGGATTATTTTAGGCGGTATGATG 1440
BSNT_02402___ 1447 GCGATTGATATGGGCGGCCCGCTTAATAAAGCAGCCTTTACGTTCGGTAT 1496
||.||.||.||||||||||||||.||||||||.||.||.||.||||||||
RBAM_014140__ 1441 GCTATCGACATGGGCGGCCCGCTCAATAAAGCGGCGTTCACTTTCGGTAT 1490
BSNT_02402___ 1497 CGCCATGATCGATGCAGGCAACTATGCGCCTCATGCAGCAATCATGGCCG 1546
.||.||||||||.||.||.||||||||.||.||.|||||.||||||||.|
RBAM_014140__ 1491 TGCGATGATCGACGCCGGAAACTATGCCCCGCACGCAGCCATCATGGCGG 1540
BSNT_02402___ 1547 GCGGTATGGTTCCTCCGCTTGGTATCGCACTTGCAACAACCATT-TTCAG 1595
||||.||||.|||.||||||||.||||||||.||.|||| |||| ||.|.
RBAM_014140__ 1541 GCGGAATGGCTCCGCCGCTTGGAATCGCACTGGCGACAA-CATTCTTTAA 1589
BSNT_02402___ 1596 AAACAAATTCACTCAGCGTGACCGTGAAGCTGGTATTACATGCTATTTCA 1645
|.|.||||||.||.|.||||||||||||||.||||||||.|||||.||||
RBAM_014140__ 1590 ACATAAATTCTCTAAACGTGACCGTGAAGCCGGTATTACGTGCTACTTCA 1639
BSNT_02402___ 1646 TGGGAGCTGCTTTCGTAACAGAGGGAGCGATCCCATTTGCTGCGGCTGAT 1695
||||||||||||||||.|||||.||.||.|||||.|||||.|||||||||
RBAM_014140__ 1640 TGGGAGCTGCTTTCGTTACAGAAGGCGCCATCCCGTTTGCGGCGGCTGAT 1689
BSNT_02402___ 1696 CCGCTTCGCGTCATACCAGCTGCTGTAGTCGGTGCAGCTGTTGCCGGCGG 1745
||||||||||||||.||.||.||.||..|||||.|.||.||.||.|||||
RBAM_014140__ 1690 CCGCTTCGCGTCATCCCTGCAGCCGTTATCGGTTCTGCGGTAGCGGGCGG 1739
BSNT_02402___ 1746 ATTAACTGAATTCTTCCGAGTAACGCTTCCGGCGCCTCATGGAGGAGTAT 1795
|.|.||.||.||.|||||.|||||||||||.||.||.||.||||||.|||
RBAM_014140__ 1740 ACTGACAGAGTTTTTCCGGGTAACGCTTCCTGCACCGCACGGAGGAATAT 1789
BSNT_02402___ 1796 TCGTAGCTTTCATTACAAACCATCCGATGCTTTACCTTTTAAGTATCGTG 1845
||||.||.|||||.||.||.||||||.|.||||||.|..|.||.||||||
RBAM_014140__ 1790 TCGTTGCATTCATAACGAATCATCCGCTTCTTTACTTAATGAGCATCGTG 1839
BSNT_02402___ 1846 ATCGGTGCTGTCGTGATGGCAATTATCCTCGGTATCGTCAAAAAACCTGT 1895
|||||.||..|.||.|.|||..|||||.|.||.||||||||||||||.||
RBAM_014140__ 1840 ATCGGAGCGATTGTAACGGCGGTTATCTTGGGAATCGTCAAAAAACCGGT 1889
BSNT_02402___ 1896 TACAGAAAAATAA 1908
|.||||.||||||
RBAM_014140__ 1890 TGCAGAGAAATAA 1902
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