Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02401 and RBAM_014130

See Amino acid alignment / Visit BSNT_02401 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:07
# Commandline: needle
#    -asequence dna-align/BSNT_02401___fruK.1.9828.seq
#    -bsequence dna-align/RBAM_014130___fruK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02401___fruK-RBAM_014130___fruK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02401___fruK-RBAM_014130___fruK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02401___fruK
# 2: RBAM_014130___fruK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 912
# Identity:     730/912 (80.0%)
# Similarity:   730/912 (80.0%)
# Gaps:           0/912 ( 0.0%)
# Score: 2922.0
# 
#
#=======================================

BSNT_02401___      1 ATGATTTACACTGTAACACTTAATCCATCTGTCGATTATATTGTTCACGT     50
                     |||||||||||||||||.||.|||||.|||||.||.|||||.||||||||
RBAM_014130__      1 ATGATTTACACTGTAACCCTCAATCCGTCTGTTGACTATATCGTTCACGT     50

BSNT_02401___     51 TGAAGATTTTACTGTAGGAGGCCTGAACCGTTCTTCGTATGATACCAAGT    100
                     ||||||||||.|.|||||.||..|.||||||||....|||||.||.||||
RBAM_014130__     51 TGAAGATTTTGCCGTAGGCGGTTTAAACCGTTCCAGCTATGACACGAAGT    100

BSNT_02401___    101 ATCCAGGGGGCAAAGGCATCAACGTATCGAGACTGCTGAAAAGACACCAT    150
                     ||||.||.||.||||||||||||||.||||||.|.|||||||||||||||
RBAM_014130__    101 ATCCCGGCGGAAAAGGCATCAACGTTTCGAGATTACTGAAAAGACACCAT    150

BSNT_02401___    151 GTGGCGTCTAAAGCGCTCGGATTCGTCGGCGGATTTACCGGAGAATATAT    200
                     |||.||||.|||||..|.|||||.||||||||||||||||||.|.|||||
RBAM_014130__    151 GTGCCGTCAAAAGCATTGGGATTTGTCGGCGGATTTACCGGAAATTATAT    200

BSNT_02401___    201 CAAAACATTTTTACGGGAAGAAAACCTGGAAACAGCTTTTTCTGAAGTAA    250
                     ||...|||||||.|.|.|.|||...||||||||.|||||||||||.||..
RBAM_014130__    201 CACGTCATTTTTGCAGCAGGAAGGTCTGGAAACGGCTTTTTCTGAGGTGG    250

BSNT_02401___    251 AAGGGGATACCCGTATCAATGTAAAGCTGAAAACTGGTGATGAAACTGAA    300
                     |.|..||.||.|||||.||||||||.||||||||.||.||||||||.|||
RBAM_014130__    251 ATGAAGACACGCGTATAAATGTAAAACTGAAAACGGGCGATGAAACGGAA    300

BSNT_02401___    301 ATTAACGGGCAGGGACCGACAATTTCGGATGAAGATTTCAAAGCCTTTTT    350
                     ||||||||.|||||.|||||.|||||.||.||||..|||||.||||||||
RBAM_014130__    301 ATTAACGGACAGGGCCCGACGATTTCAGACGAAGTGTTCAATGCCTTTTT    350

BSNT_02401___    351 AGAACAGTTCCAATCTTTGCAAGAGGGAGATATCGTCGTTCTTGCAGGAA    400
                     ||||||||||....||.||.||||||||||.|||||||||.|.||.||||
RBAM_014130__    351 AGAACAGTTCTCCGCTCTGGAAGAGGGAGACATCGTCGTTTTAGCGGGAA    400

BSNT_02401___    401 GCATTCCATCTTCACTCCCTCACGATACTTATGAAAAAATCGCAGAGGCC    450
                     |||||||.|||||.||.||.||..|.||.|||||||||||.||.|||||.
RBAM_014130__    401 GCATTCCTTCTTCCCTGCCGCATAACACGTATGAAAAAATTGCTGAGGCA    450

BSNT_02401___    451 TGCAAACAGCAGAACGCACGAGTTGTTCTGGATATCTCAGGCGAGGCTCT    500
                     ||||.|.|||||||.||.||.||.||..|.||.|||||.||.||.||.||
RBAM_014130__    451 TGCAGAAAGCAGAATGCCCGGGTAGTGGTAGACATCTCCGGTGAAGCGCT    500

BSNT_02401___    501 TTTGAAAGCAACAGAAATGAAACCATTTTTGATGAAGCCAAATCATCATG    550
                     ..|||||||.|||||||||||||||||||||||||||||.||||||||||
RBAM_014130__    501 GATGAAAGCGACAGAAATGAAACCATTTTTGATGAAGCCGAATCATCATG    550

BSNT_02401___    551 AGCTTGGAGAAATGTTCGGCACGGCCATTACATCTGTTGAGGAAGCCGTT    600
                     |||||||.|||||||||...||||.||||...||.|..||.|..||||||
RBAM_014130__    551 AGCTTGGGGAAATGTTCAATACGGTCATTGATTCAGCCGAAGCTGCCGTT    600

BSNT_02401___    601 CCTTATGGGAAAAAGCTTGTAGAACAAGGCGCTGAACATGTAATTGTATC    650
                     |||||.||.|||||..|..|.|||||||||||||||||.|..|||||.||
RBAM_014130__    601 CCTTACGGTAAAAAATTAATTGAACAAGGCGCTGAACACGCGATTGTTTC    650

BSNT_02401___    651 AATGGCCGGAGACGGAGCGCTTCTGTTTACGAACGAAGCTGTTTATTTTG    700
                     .|||||.||.|||||.||||||.|.||||||||.||.||.||||...|.|
RBAM_014130__    651 GATGGCTGGCGACGGTGCGCTTTTATTTACGAAAGAGGCGGTTTTCCTCG    700

BSNT_02401___    701 CTAACGTGCCAAAGGGGAAATTGGTAAACTCAGTCGGAGCAGGGGATTCC    750
                     |.||.||.||.||.||.||..|.||.||.||.||.||.||.||.||||||
RBAM_014130__    701 CCAATGTTCCTAAAGGAAAGCTTGTCAATTCGGTAGGCGCGGGTGATTCC    750

BSNT_02401___    751 GTTGTTGCAGGTTTCCTTGCCGGAATTTCCAAACAGCTGCCGCTTGAAGA    800
                     ||.||.||.||.||||||||.||||||||.|||||||||||..|.|||||
RBAM_014130__    751 GTCGTCGCGGGATTCCTTGCGGGAATTTCAAAACAGCTGCCTTTGGAAGA    800

BSNT_02401___    801 AGCATTCCGCTTAGGAGTTACTTCAGGCAGTGCTACCGCGTTCTCTGAAG    850
                     .||.|||||.|||||||||.||||.||.||.||.||.||.||.|||||||
RBAM_014130__    801 TGCGTTCCGTTTAGGAGTTGCTTCCGGAAGCGCGACGGCATTTTCTGAAG    850

BSNT_02401___    851 AACTTGGAACAGAAGAATTTGTCCAGCAGCTTCTTCCTGAAGTTAAGGTC    900
                     ||||.|||||.|||||.|||||.|||||||||||||||||||||||.|||
RBAM_014130__    851 AACTCGGAACTGAAGAGTTTGTACAGCAGCTTCTTCCTGAAGTTAAAGTC    900

BSNT_02401___    901 ACACGTCTATAG    912
                     ||||||||||||
RBAM_014130__    901 ACACGTCTATAG    912


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