Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02390 and RBAM_014070

See Amino acid alignment / Visit BSNT_02390 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:06
# Commandline: needle
#    -asequence dna-align/BSNT_02390___moaD.1.9828.seq
#    -bsequence dna-align/RBAM_014070___moaD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02390___moaD-RBAM_014070___moaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02390___moaD-RBAM_014070___moaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02390___moaD
# 2: RBAM_014070___moaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 245
# Identity:     156/245 (63.7%)
# Similarity:   156/245 (63.7%)
# Gaps:          22/245 ( 9.0%)
# Score: 453.5
# 
#
#=======================================

BSNT_02390___      1 ATGATTAAAATTCTTTTATTTGCAGGACTGGCTGAACAGGCCGGTACACA     50
                     |||||||||.|..|.||.|||||.||.||.||.||.|||||.||.||||.
RBAM_014070__      1 ATGATTAAAGTATTATTGTTTGCCGGGCTTGCGGAGCAGGCGGGAACACC     50

BSNT_02390___     51 AGCAATAGAAATAGATGTGGAACAAGCAACCACAGA----------TGAA     90
                     .|..||.|||.|   ||..|||.|||       |||          ||..
RBAM_014070__     51 GGTCATTGAACT---TGACGAAAAAG-------AGACGGCGGCGTCTGCT     90

BSNT_02390___     91 ATAAAAGCGAGTCTAAAAGAACAATACGGTCTTGAATCTATTGATACGGC    140
                     .|||||.||...|||||.||||..|||||.|||.|..|.|||||.|..||
RBAM_014070__     91 GTAAAAACGCTGCTAAAGGAACGGTACGGCCTTCAGACGATTGACAATGC    140

BSNT_02390___    141 TATGATTGCCGTTAACGAAAGCTATGTAAAAGAAAATA-CCTCTGTATCT    189
                     .|||||.||..|.||.||||..|||||||||||.||.| |.|| |||.|.
RBAM_014070__    141 CATGATCGCAATCAATGAAACATATGTAAAAGACAACAGCATC-GTAACA    189

BSNT_02390___    190 TCGGGTGACACGGTAGCCATCATACCGCCGGTCAGCGGGGGATGA    234
                     ...|||||.||..|.|||.|.||.||.||.||.|||||.||.|||
RBAM_014070__    190 GAAGGTGATACCATTGCCTTTATCCCTCCTGTAAGCGGAGGGTGA    234


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