Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02385 and RBAM_014040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:06
# Commandline: needle
# -asequence dna-align/BSNT_02385___moeA.1.9828.seq
# -bsequence dna-align/RBAM_014040___moeA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02385___moeA-RBAM_014040___moeA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02385___moeA-RBAM_014040___moeA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02385___moeA
# 2: RBAM_014040___moeA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1308
# Identity: 976/1308 (74.6%)
# Similarity: 976/1308 (74.6%)
# Gaps: 30/1308 ( 2.3%)
# Score: 3562.0
#
#
#=======================================
BSNT_02385___ 1 ATGCTGGAGAAAAGAACACCGATACCGGTAGACGAGGCAGTTCGGCGTGT 50
|||||.||.||||||||.|||||.|.|||.|||||.|||||.||.||.||
RBAM_014040__ 1 ATGCTTGAAAAAAGAACGCCGATTCAGGTGGACGAAGCAGTCCGCCGGGT 50
BSNT_02385___ 51 CTGCCATTTTCAAAAACAAGGTGAAACAGAATGGGTGGCGCTTGAAGACA 100
..|||..|.|.|||||||.||.||.||.|||||||||||||||||.||||
RBAM_014040__ 51 GAGCCGGTATAAAAAACAGGGGGATACCGAATGGGTGGCGCTTGAGGACA 100
BSNT_02385___ 101 GCCTTCATCGGTTTTTAGCCGAAGATATAACTGCGGATCACCACGTCCCT 150
|.||.||.||.|.|||.||.||.|||.|.|..||||||||..|.||.||.
RBAM_014040__ 101 GTCTCCACCGCTATTTGGCGGAGGATGTTAAGGCGGATCATGATGTGCCG 150
BSNT_02385___ 151 GCGTTTGATCGTTCGCCATACGATGGTTTTGCTGTCAGAGCGTGCGATAC 200
||.|||.|.|||||.||.||.||.||.|||||..||||.|||.|||||
RBAM_014040__ 151 GCCTTTAACCGTTCCCCGTATGACGGGTTTGCCATCAGGGCGAGCGAT-- 198
BSNT_02385___ 201 GGCAGAA---GCTTCACGTGAAAACCCAGTTCGGTTTGAAGTTATTGACC 247
.||.|| |||||..||||.||..|.||....||||||||.|||||||
RBAM_014040__ 199 -TCAAAAACGGCTTCCGGTGACAATGCCGTCACCTTTGAAGTCATTGACC 247
BSNT_02385___ 248 ATATTGGAGCAGGAGCAGTATCTGAAAAAGAACTTGGCCCGTTTCAGGCC 297
||||.||||||||.||.||.||.|||||||||||.||.||.|||.|.||.
RBAM_014040__ 248 ATATCGGAGCAGGCGCCGTGTCAGAAAAAGAACTCGGGCCTTTTGAAGCG 297
BSNT_02385___ 298 GTACGGATTATGACTGGCGCGCAAATCCCTGAAGGGGCAGATGCAGTCGT 347
||.||.||||||||.||.|||||.||.||..||||.||.|||||.||.||
RBAM_014040__ 298 GTCCGCATTATGACGGGGGCGCAGATTCCAAAAGGTGCGGATGCCGTAGT 347
BSNT_02385___ 348 CATGATTGAACTGACTCAAACCTTTGAGGAGAATGGGAAGTCATTT--AT 395
.|||.||||.|||||..||||.|||...||.||.||||.| |.|| ||
RBAM_014040__ 348 GATGCTTGAGCTGACAAAAACGTTTTCTGAAAACGGGACG--AATTACAT 395
BSNT_02385___ 396 GTCTTTAAAACGCCGCTTTCAGACGGGGGATAATATTTCAAAAACAGGTG 445
|||..|.|||||||..|||||.|||||.||||||||||||.|...|||.|
RBAM_014040__ 396 GTCAGTGAAACGCCCTTTTCATACGGGTGATAATATTTCATATCAAGGAG 445
BSNT_02385___ 446 AGGACGCTCAAAAAGGGAGTGTTTTACTGAGAAAGGGTACCCGGG----T 491
|.|||||..|||||||.||.....||.|.|.|||.||.|| | |
RBAM_014040__ 446 AAGACGCGAAAAAAGGCAGCTCGCTATTAAAAAAAGGGAC----GAAAAT 491
BSNT_02385___ 492 GACACCAGGAGTGACGGCTCTTTTGGCAACATTCGGATACTCATCTGTGC 541
.||.||.||.||.||.||||||||.|||||.|||||.||..|.||.||.|
RBAM_014040__ 492 TACGCCGGGCGTAACCGCTCTTTTAGCAACCTTCGGCTATGCTTCCGTTC 541
BSNT_02385___ 542 CTGTCGTGAGAAAGCCTGTAGTCGGGATTATCGCAACCGGTACCGAATTG 591
|.||.||.||||||||.||.|||||.|||||||||||.||.|||||..|.
RBAM_014040__ 542 CCGTGGTCAGAAAGCCGGTTGTCGGCATTATCGCAACGGGGACCGAGCTT 591
BSNT_02385___ 592 CTGAATGTCAGTGATCCGCTGGAACCGGGAAAAATCCGCAACAGCAA--- 638
||..|||||||.||||||||.||.|||||.|||||||||||||||||
RBAM_014040__ 592 CTTCATGTCAGCGATCCGCTTGAGCCGGGGAAAATCCGCAACAGCAACGC 641
BSNT_02385___ 639 TGCGAGTATGGTATATGCGCAAGCGATAGAAGCAGGCGCAACACCGCTTT 688
|||| |||||.|||||.||.|..||.|||||.||.||.|.||||||..
RBAM_014040__ 642 TGCG---ATGGTGTATGCCCAGGTCATTGAAGCGGGTGCGATACCGCTGA 688
BSNT_02385___ 689 ATTTAGGGAAAATCTCTGATGAACTGGATAAAAGCTTTGCTGCAGTTAAA 738
|.|||||||||||.||.|||||..|.|||.|.||||.||.|||.||.||.
RBAM_014040__ 689 ACTTAGGGAAAATTTCCGATGATTTTGATGACAGCTATGTTGCGGTGAAG 738
BSNT_02385___ 739 GAAGCGATGAAAAAGGTGGACTTCCTGATCACAACTGGCGGTGTGTCAGT 788
|||||.||||||||.||.||.||.||.|||||.||.|||||.||||||||
RBAM_014040__ 739 GAAGCTATGAAAAAAGTTGATTTTCTCATCACGACCGGCGGCGTGTCAGT 788
BSNT_02385___ 789 CGGTGACTTTGACTTTTTGCCTGCGATCTATGAAAAACTCGGAGCGGACG 838
|||.||.|||||.|||.|.||.|..||.|||.|.||.|||||||||||.|
RBAM_014040__ 789 CGGCGATTTTGATTTTCTCCCAGACATTTATAATAAGCTCGGAGCGGAAG 838
BSNT_02385___ 839 TGCTGTTTAATAAAGTTGCCATGCGCCCGGGCAGCGTGACAACGGTGGCG 888
|.||.|||||.|||||.||.|||||||||||.|||||||||||.||.||.
RBAM_014040__ 839 TTCTTTTTAACAAAGTGGCAATGCGCCCGGGGAGCGTGACAACTGTCGCC 888
BSNT_02385___ 889 CATGCAAACGAT---ATGCTGCTGTTTGGCCTTTCAGGTAATCCGTCGGC 935
|..|| |||| |||||||||||.|||||||||||.||||||||.||
RBAM_014040__ 889 CGGGC---CGATAACATGCTGCTGTTCGGCCTTTCAGGCAATCCGTCCGC 935
BSNT_02385___ 936 ATGCTATGTCGGTTTTGAACTGTTTGTCAAACCGATAATCCAGACATGGC 985
|||.||||||||.||....|||||||||||||||||.||.|||||.||||
RBAM_014040__ 936 ATGTTATGTCGGATTCACCCTGTTTGTCAAACCGATGATTCAGACGTGGC 985
BSNT_02385___ 986 TGCTCAATGAAACACCGCATTCAATTTGTGCGGAAGCTGTTTTGACCAAG 1035
|.||.|||||||.|||.|||||....||.||||||||.||.||.||.||.
RBAM_014040__ 986 TTCTGAATGAAAAACCTCATTCCGGATGGGCGGAAGCCGTGTTAACAAAC 1035
BSNT_02385___ 1036 GATTTTCCGAAGCCGAACCCATTTACCCGATTTGTTCGTGCGCTCGTGCA 1085
||.||||||||||||||.||.|||||..|||||||..|.|||.|.||..|
RBAM_014040__ 1036 GACTTTCCGAAGCCGAATCCGTTTACGAGATTTGTGAGGGCGTTTGTTTA 1085
BSNT_02385___ 1086 CCATCAGGAAGGGAAGCTGTTGGCGACACCCGTTGGCTTAGATAAGTCGA 1135
.|||.||||.||.|||.||.|||||.||||.||.||..|.||.||.||.|
RBAM_014040__ 1086 TCATAAGGACGGAAAGATGATGGCGTCACCGGTCGGTCTCGACAAATCAA 1135
BSNT_02385___ 1136 GCTCTGTCACATCACTTGCAGATGCCAATGCATTTATTATCCTGCCGGGC 1185
||||.||||||||.||.||.||.||.||.||.|||||..|.||||||||.
RBAM_014040__ 1136 GCTCAGTCACATCTCTAGCCGAAGCAAACGCGTTTATCCTTCTGCCGGGA 1185
BSNT_02385___ 1186 GGCACGCGAGGCTACGAATCTGGCAGAACGGTTCAAGTACTGCTCATCAG 1235
||.|||.|.||.||.|||.|.|||.|.||||||||.|..||.||||||.|
RBAM_014040__ 1186 GGAACGAGGGGGTATGAAGCGGGCCGTACGGTTCACGCGCTCCTCATCCG 1235
BSNT_02385___ 1236 AGAAGAGAATGGAAGTGAATGGCCTTGGTCCGTCCTTTCCCGATCGTCCA 1285
.||.||||||||||||||||||||.|||||..|.||||||||||||||||
RBAM_014040__ 1236 TGATGAGAATGGAAGTGAATGGCCGTGGTCAATTCTTTCCCGATCGTCCA 1285
BSNT_02385___ 1286 AGTTGTAG 1293
..|.||||
RBAM_014040__ 1286 GATCGTAG 1293
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