Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02383 and RBAM_014030

See Amino acid alignment / Visit BSNT_02383 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:06
# Commandline: needle
#    -asequence dna-align/BSNT_02383___moeB.1.9828.seq
#    -bsequence dna-align/RBAM_014030___moeB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02383___moeB-RBAM_014030___moeB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02383___moeB-RBAM_014030___moeB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02383___moeB
# 2: RBAM_014030___moeB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1039
# Identity:     747/1039 (71.9%)
# Similarity:   747/1039 (71.9%)
# Gaps:          38/1039 ( 3.7%)
# Score: 2548.0
# 
#
#=======================================

BSNT_02383___      1 ATGGAGGAACGTTATTCACGGCAAATCAGATTTAAGCAAATTGGGGAAGA     50
                     |||||.||.||.|||||.|||||.|..||||||||||..||.||||||.|
RBAM_014030__      1 ATGGAAGAGCGCTATTCGCGGCAGACAAGATTTAAGCCGATAGGGGAAAA     50

BSNT_02383___     51 GGGCCAGAAAAGACTGGCAGACAGCCATGTGCTGATTGTCGGAGCGGGAG    100
                     .||.|||.|....|||||.||||||..|||.||||||||||||||.||||
RBAM_014030__     51 AGGGCAGCAGGCGCTGGCTGACAGCAGTGTCCTGATTGTCGGAGCCGGAG    100

BSNT_02383___    101 CGCTCGGCACTGCAGGAGCTGAAGGACTTTCGAGAGCGGGAGTCGGTACG    150
                     |.|||||.||.||.|..||.||.||.||..|.|||||.|||| |||..||
RBAM_014030__    101 CCCTCGGAACAGCCGCGGCAGAGGGCCTGGCAAGAGCCGGAG-CGGGCCG    149

BSNT_02383___    151 -ATTACCATTATTGACCGTGACTATGTGGAGTGGAGCAATCTTCAAAGGC    199
                      ||..|.|||||||||||.||.||||||||.|||||||||.|.|||||.|
RBAM_014030__    150 TATGGCGATTATTGACCGGGATTATGTGGAATGGAGCAATTTACAAAGAC    199

BSNT_02383___    200 AGCAGCTTTATACAGAAAGCGATGCCAAACTCCGCATGCCGAAAGCCATG    249
                     |||||||.|||||||||...||.||.|.||..|||.||||||||||.|||
RBAM_014030__    200 AGCAGCTGTATACAGAAGAAGACGCGAGACAGCGCCTGCCGAAAGCAATG    249

BSNT_02383___    250 GCTGCCAAAGAGCATCTATCAGCGATTAACAGCGAGATACATATTGAGGC    299
                     ||.||.||.|.||.|||.|..|||.|.|||||.||.||||||||.||.||
RBAM_014030__    250 GCGGCAAAGGCGCGTCTTTTGGCGGTAAACAGTGATATACATATCGATGC    299

BSNT_02383___    300 GTATGTTACCGAAGGAACAGCCGAAACGCTTGAGCCGCTGATTGAAAAAG    349
                     .||.|...|.|||||.||.||.||||||||.||.||||||||.|||.|||
RBAM_014030__    300 TTACGCGGCGGAAGGTACGGCGGAAACGCTCGAACCGCTGATCGAACAAG    349

BSNT_02383___    350 CAGAT---GTCGTGATCGACGCGACAGATAATTTTGAAACCCGCATGCTG    396
                     |.|||   .|||||   ||.||||||||||||||||||||..|.|||.|.
RBAM_014030__    350 CGGATTGCATCGTG---GATGCGACAGATAATTTTGAAACGAGAATGGTC    396

BSNT_02383___    397 ATAAACGATCTTGCCCAGAAAACAAAGACACCTTGGGTCTATGGCGCCTG    446
                     ||.||.|||||.||.|.||||||.||.|||||||||.|.||.||.|||||
RBAM_014030__    397 ATCAATGATCTGGCGCTGAAAACGAAAACACCTTGGATTTACGGTGCCTG    446

BSNT_02383___    447 TGTAAGCAGCCAGGGAATGTTCATGACTGTCATTCCCGGAGAAACCCCTT    496
                     |||.|||||.||||||||||.||||||..|.|||||.||.|..||.||.|
RBAM_014030__    447 TGTCAGCAGTCAGGGAATGTGCATGACGATTATTCCGGGGGTTACGCCGT    496

BSNT_02383___    497 GTCTGTCTTGTTTGTTTGAGCAAATTCCTGTCGGCGGGGCGACGTGTGAT    546
                     ||.|.||.||..|||||||||||||.||.||.|||||.|||||.||||||
RBAM_014030__    497 GTTTATCCTGCCTGTTTGAGCAAATGCCCGTGGGCGGAGCGACATGTGAT    546

BSNT_02383___    547 ACTGCCGGCATTATTCCGCCTGCTGTGCATATCGTTTCAGCATATCAGCA    596
                     ||.||.||.||.||.||.||.||.||.||||||||.||.||.||||||||
RBAM_014030__    547 ACAGCAGGTATCATACCTCCGGCGGTTCATATCGTCTCCGCTTATCAGCA    596

BSNT_02383___    597 GGCTGAGGCATTAAAGCTGTTAACCGGCCAAA--AAGAAGCAATACAGCG    644
                     |||||||||..|.||..||.|.||.||  |||  |.|..||..||.|.||
RBAM_014030__    597 GGCTGAGGCGCTGAAATTGCTGACAGG--AAATCATGCGGCGGTAAATCG    644

BSNT_02383___    645 GGGTTTTGTGACATTTGATGTCTGGAACAATTCGCATATGAAGATTAACG    694
                     |.|.|||.|.||.|||||.||.|||||.||..|..||||||..||.||.|
RBAM_014030__    645 GCGCTTTTTCACGTTTGACGTGTGGAATAACACCAATATGAGCATAAATG    694

BSNT_02383___    695 TTAATCATGTACGCCGTGAGGAATGCCCATCTTGCGGAGCTAATGCGGTA    744
                     |..||||..|....||.||..|.|||||.||.|||||.||..|..|.|||
RBAM_014030__    695 TGGATCAGATCAAACGGGATCATTGCCCTTCCTGCGGCGCGGAGCCCGTA    744

BSNT_02383___    745 TATCCTTATCTTCAGGATTGGAACACA--CCAAAAGC-----TGCTGTAC    787
                     |||||.|||||.|||..|  |||.|||  ||.|||||     |||||   
RBAM_014030__    745 TATCCGTATCTGCAGCCT--GAAAACAGGCCGAAAGCAAGCGTGCTG---    789

BSNT_02383___    788 TATGCGGCCGTGACACAGTGCAGGTAAGGTCAGAATCATTAAAAA----G    833
                       |||||..|.|||||.||.||..|.||.||.|||.|.|||||.|    |
RBAM_014030__    790 --TGCGGAAGAGACACCGTTCAAATCAGATCGGAAGCCTTAAAGAGGCTG    837

BSNT_02383___    834 AATCCCGAAACAGGAGCTCATTAAGCGGCTGAAAACA-ATCGGCAAGGTC    882
                     .||    |||.|.|||||..|.||.||.||| ||.|| |||||.||.||.
RBAM_014030__    838 GAT----AAAGAAGAGCTTGTCAAACGTCTG-AAGCAGATCGGTAAAGTG    882

BSNT_02383___    883 GAGGCTAATGCGTTTTTGCTGCATATTTTTTACGAGGATTTCAGAATTGT    932
                     ||.||.||||..|||.|||||||.||....||.|||...||||||||.||
RBAM_014030__    883 GAAGCAAATGAATTTCTGCTGCACATGGCGTATGAGCGCTTCAGAATCGT    932

BSNT_02383___    933 CA-TTTTCAGTGACGGACGGGCACTGGTGCATGGAACAAATGATGTGAAA    981
                     .| ||||||| |||||||||||..||.|.||.||.|||||.|||.|.|||
RBAM_014030__    933 TATTTTTCAG-GACGGACGGGCTTTGATTCACGGTACAAACGATATAAAA    981

BSNT_02383___    982 GAAGCCAACTCCGTGTTGGCAAGAGTGATTGGACTGTAA   1020
                     |||||.||.||.||..||||.||.|||||.||||||||.
RBAM_014030__    982 GAAGCAAATTCAGTTCTGGCCAGGGTGATCGGACTGTAG   1020


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02383 and RBAM_014030

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
