Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02381 and RBAM_014020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:06
# Commandline: needle
# -asequence dna-align/BSNT_02381___mobA.1.9828.seq
# -bsequence dna-align/RBAM_014020___mobA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02381___mobA-RBAM_014020___mobA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02381___mobA-RBAM_014020___mobA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02381___mobA
# 2: RBAM_014020___mobA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 656
# Identity: 403/656 (61.4%)
# Similarity: 403/656 (61.4%)
# Gaps: 109/656 (16.6%)
# Score: 1071.0
#
#
#=======================================
BSNT_02381___ 1 ATGAAGCATGTAAACGTACTGTTGGCAGGGGGAGCCTCACGTCGCTTTGG 50
|||||.|..||.||.|||.|.||.||.||||||||.||.||..|.||.||
RBAM_014020__ 1 ATGAAACGGGTGAATGTAATATTAGCGGGGGGAGCTTCCCGAAGATTCGG 50
BSNT_02381___ 51 AGAACCGAAGGCGTTTGTCAAA-TGGAAGGGCAGGATGCTTTACGAATGC 99
|||||||||.||.|||| |||| |||||||||.|.|||.||||.|||...
RBAM_014020__ 51 AGAACCGAAAGCTTTTG-CAAAGTGGAAGGGCGGCATGTTTTATGAACAG 99
BSNT_02381___ 100 GCTAAAGAGGCACTT----GGAGAACAAACGGTTATCATCAGCCGTCCCG 145
||.|||.|.|| ||| ||.|.|.|||||||.||.||||||||.||.|
RBAM_014020__ 100 GCGAAAAAAGC-CTTCGGCGGCGGAGAAACGGTAATTATCAGCCGCCCTG 148
BSNT_02381___ 146 A--ATTTA------TTGATAGATTTCA---AGAAAACGGTGAAAATGAAG 184
| ||.|| ||..|| ||| |||.|.||| .|||...
RBAM_014020__ 149 AGCATATAAAAAAGTTCTTA----TCAAACAGAGAGCGG----CATGTTT 190
BSNT_02381___ 185 TGTATCAAGATGCTGAGCC---ATTTCAAGGCATGGGGCCATTGGCTGGT 231
|| |..|.|||||| .||||..||.|||||.||..||||.||.
RBAM_014020__ 191 TG------GCCGATGAGCCGCGGTTTCGGGGAATGGGCCCGCTGGCCGGC 234
BSNT_02381___ 232 ATATATACCGCTTTTAAAAAGACAGACGGTG-ATCTTTATACTGTTCTTT 280
||||||||.||..|.|||.|.||.||.||.| |.|.|| |||.||..|.|
RBAM_014020__ 235 ATATATACGGCAATGAAACAAACGGAAGGCGAAACATT-TACGGTCATAT 283
BSNT_02381___ 281 CCTGTGACACACCGCT-GATACAAAGAAGGACGATGCTGGAGCTCAAACG 329
||||||||||.||||| |..|| |||||..||||||.|.|.|||..||
RBAM_014020__ 284 CCTGTGACACGCCGCTCGTGAC-AAGAAAAACGATGGTTGCGCTTGAA-- 330
BSNT_02381___ 330 TCTGATGA--CTGCCGG----TGCGGACGCGGTAGTCCCAATTT------ 367
|||| |||.||| |..||||||.||..|.||..|||
RBAM_014020__ 331 ----ATGAAGCTGACGGGAAATCTGGACGCTGTCATACCGGTTTGTAAAA 376
BSNT_02381___ 368 -CAGACGGACAAGTGCAGCCATTGATTGCGATTTACCACAAACGTAT-CA 415
||| ||.||||||..|..|.|||.|||||||.|||||..| ||
RBAM_014020__ 377 ACAG-------AGAGCAGCCCCTCTTGGCGGTTTACCATAAACGGGTGCA 419
BSNT_02381___ 416 TGCCA-GTTCTATACGATCAGCTTTCTGAGAAGAGGTTGAGAATATCAGA 464
.| | ||.||.|..||||||||..|..|.||.|...|||.|||..||||
RBAM_014020__ 420 GG--ATGTGCTTTTTGATCAGCTGACACAAAACAAACTGAAAATGACAGA 467
BSNT_02381___ 465 TTTATTAGGCAGAA-----TTTCGGTTTGTTACGTACAGGCTGAAAATAT 509
.|.||.||| |.||.||.|||||.||.|||||||||.|.||
RBAM_014020__ 468 -----CACGCTGAAACGGCTGTCTGTCTGTTATGTGCAGGCTGAAGACAT 512
BSNT_02381___ 510 CGGAGCAAACCCGGCAGAGTT------TATCAACATTAATACACGTGATG 553
|||.||....||||..||||| ||||||| ||||..||.|
RBAM_014020__ 513 CGGCGCCGGGCCGGAGGAGTTCGCTAATATCAAC------ACACAGGACG 556
BSNT_02381___ 554 ATTTTAGCTG---TTTGG---AAGAAAAATCGA-ACTCC--CTCAAGCGG 594
|||..|.|.| ||||| |.| |||| .||.| .||||
RBAM_014020__ 557 ATTACACCAGACTTTTGGCGCATG-----TCGAGTCTTCAAATCAA---- 597
BSNT_02381___ 595 GACTGA 600
||||||
RBAM_014020__ 598 GACTGA 603
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